Leopardus geoffroyi (Geoffroy's cat): 123582917
Help
Entry
123582917 CDS
T10761
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04659
Th17 cell differentiation
lgf04710
Circadian rhythm
lgf05017
Spinocerebellar ataxia
lgf05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
123582917 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
123582917 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
123582917 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
123582917 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123582917 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lgf03310
]
123582917 (RORA)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123582917 (RORA)
Nuclear receptors [BR:
lgf03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
123582917 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
123582917
NCBI-ProteinID:
XP_045305497
LinkDB
All DBs
Position
B3:43773470..44495882
Genome browser
AA seq
523 aa
AA seq
DB search
MESAPAAPDPAASEPGSSGADAAAGARETPLNQESARKSEPPAPVRRQSYSSTSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYNISANGLTELHEDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIESYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagcggcgcg
gacgcggccgccggcgccagggagaccccgctgaaccaggaatccgcccgcaagagcgag
ccgcccgccccggtgcgcagacagagctattccagcaccagcagaggtatctcagtaacg
aagaagacgcatacatctcaaattgaaattattccttgcaagatctgtggagacaaatca
tcaggaatccattatggtgtcattacatgtgaaggctgcaagggctttttcaggagaagt
cagcaaagcaatgccacctactcctgtcctcgtcagaagaactgtttgattgatcgaacc
agtagaaaccgctgccaacactgtcgattgcagaaatgccttgccgtagggatgtctcga
gatgctgtaaaatttggccgaatgtccaaaaagcagagagacagcttgtacgcagaagtg
cagaaacaccggatgcagcagcagcagcgagaccaccaacagcagcccggagaggctgag
ccgctgactccaacctacaacatctcggccaacgggctgacagagcttcacgaggacctc
agcaactacattgacgggcacacccctgaggggagcaaggcagactctgctgtcagcagc
ttctacctggacatacagccttccccagaccagtcaggtcttgatatcaacggaatcaag
ccagaaccaatatgtgactacacaccagcatcaggcttctttccctactgttctttcacc
aatggagagacttccccaactgtgtccatggcggaactagaacaccttgcacagaatata
tctaaatcacatctggaaacttgccaatacttgagagaagagctccagcagataacgtgg
cagacttttctgcaggaggagatagagagctaccaaaacaagcagcgggaggtgatgtgg
caattgtgtgccatcaaaatcacggaggctatacagtatgtggtggagtttgccaaacgc
attgatggatttatggaactgtgtcaaaatgatcaaattgtgcttctcaaagcaggttct
ctagaggtggtgtttatcagaatgtgccgtgccttcgactctcagaacaacaccgtgtac
tttgatgggaaatatgctagccccgatgtcttcaaatccttgggttgtgaagactttatt
agctttgtatttgaatttggaaagagtttatgttctatgcacctgaccgaagatgaaatt
gcattattttctgcgtttgtactaatgtcagcagatcgctcatggctgcaggagaaggta
aagattgaaaaactgcaacagaaaattcagttagctcttcaacatgtcctgcagaagaat
caccgagaagatggaatcctaacaaagttaatatgcaaggtgtctacgttaagagcctta
tgtggacgacatacagaaaagctaatggcatttaaagcaatatacccagacattgtgcga
cttcattttcctccattatacaaggagttgttcacttcagaatttgagccagcaatgcaa
atcgatgggtaa
DBGET
integrated database retrieval system
