Leopardus geoffroyi (Geoffroy's cat): 123583007
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Entry
123583007 CDS
T10761
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
123583007 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123583007 (MYO5C)
04131 Membrane trafficking [BR:
lgf04131
]
123583007 (MYO5C)
03029 Mitochondrial biogenesis [BR:
lgf03029
]
123583007 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lgf04812
]
123583007 (MYO5C)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
123583007 (MYO5C)
mRNA cycle factors
P-body specific factors
123583007 (MYO5C)
Membrane trafficking [BR:
lgf04131
]
Others
Actin-binding proteins
Myosins
123583007 (MYO5C)
Mitochondrial biogenesis [BR:
lgf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
123583007 (MYO5C)
Cytoskeleton proteins [BR:
lgf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
123583007 (MYO5C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
123583007
NCBI-ProteinID:
XP_045305676
LinkDB
All DBs
Position
B3:52137457..52241865
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAALYTQYNRVWIPDPEEVWKSAEIAKDYKVGDKVLRLLLEDGTELDYSIDPESLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGSTVIEGVNDR
ADMVETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQITAVGNERSSVSEDDTHLEVFCE
LLGLESSKFAQWLCNRKIITTSETVVKPMTRPQAVNARDALAKKIYAHLFNFIVDRINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCASFFQENPVPPSPF
GSAITVKSAKPVIKPNNKQFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGVLMTKQELSFSDKKEVCKVV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVVIQKHIRGWLQRKKFLRER
QAVLTIQQYFRGQQTVRKAVTATALKEAWAAIIIQKYCRGYLVRSLYQLIRVATITIQAY
TRGLLARRKYRKMLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKVTSLAALRASDMEKIQKLESELDRAATHRHNYEEKGRKYKAAMEEKLAK
LQKHNSELEIQKEQTELQLREKTEELKEKMDNLTKQLFDDVQKEERQRILLEKSFERKTQ
DYEKQICSLKKDIQALKDEKMHLQHQLEEERVTSDALKGEVAHLSKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITKQLLESYDIEDVRSRLSLEDLEHLNEDGELWFA
YEGLKKATHVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREETDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQTESMKGKLEELSNQLNRNQEEEGTQ
RKTLEAQNEIHTKEKEKLISKIQEMQQASELLKKQFESESEVKSSFRQEASRLTMENRDL
EEELDMKDRVIKKLQDQVKTLSKTIEKGNDVHLSSRPKEYLGMLEYKTEDEDKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTISGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKLNSPHQNKNCLNNFDLSEYRQILSDVAIRIYHRF
IVVMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYS
TMCQNGLDPELVRQAVKQVFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgcgctctacacgcagtacaacagggtatggattcctgatcctgaagaa
gtttggaagtctgctgaaatagcaaaggactacaaagttggtgacaaagtcctgcgactt
ttgctggaggatggaacggagctggattattccatcgatccagaatctctgcctccactt
cggaatcctgacatcctcgtgggtgagaatgacctcacagccctcagctatctccacgaa
cctgcggtgcttcacaatctcagaatccgctttgcagaatccaaactcatttacacctac
agtggaatcattttggtggctatgaatccttacaagcagttgccaatctacggagatgcc
atcatccatgcctacagcgggcagaacatgggcgatatggacccacatatatttgctgtg
gctgaagaggcgtacaagcagatggccagaaacaataaaaatcagtcaataattgtaagt
ggggagtcaggtgctggaaagacagtgtctgctcgctacgccatgagatacttcgccacc
gtcagcaagtccagcagtaacgcccatgtggaggacaaggttctggcatcgaaccccata
actgaggctgttggaaatgccaagactacccgcaatgacaacagtagtcggtttgggaaa
tacacagaaatcagttttgatgagagaaatcagattataggagccaacatgagaacttac
ctgctggagaaatccagagttgtctttcaatcagaaaatgaacgaaattaccacattttt
taccagctctgtgcatctgcgcagcagtcggaatttaaacatcttaaattggggagtgca
gaggaatttaattacacaagaatgggaggcagtactgtcattgagggtgtgaatgacaga
gcagacatggtagagactcagaagaccttcacactgctgggtttcaaggaagattttcag
atggatgtttttaagatcctagcagccatcctccatctgggcaacgtgcagatcacagcg
gtgggcaacgagagatcctcagttagtgaggatgacactcacctggaggtgttctgtgag
cttcttggcctggagagtagcaaatttgctcagtggctatgcaatcggaaaatcattaca
acctctgagacggtggttaaacccatgaccaggccccaagctgtcaatgccagggatgca
ctggccaaaaagatctacgctcacctgttcaacttcattgtggacagaattaaccaagcg
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaacagctttgaacagttttgcatcaattacgctaatgagaagctgcaa
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccttggactctgatagatttttatgacaaccaaccagttattgacttgattgaagcaaaa
atgggcattttggagctactggatgaagaatgcttgttaccgcatggaactgatgaaaac
tggcttcaaaagctatacaataattttgtcaacaagaacgctttgtttgaaaagcccaga
atgtcaaatacatcctttatcatccagcactttgctgataaggtagaatataaatgtgaa
ggttttcttgagaagaacagagataccgtgtatgatatgctggttgaaatcttgagagca
agcaagtttcatctctgtgccagcttttttcaagaaaatccagttcctccttcccctttc
ggttcagcgatcacagttaaatctgcaaagccagtcatcaagccaaacaacaagcagttc
cggaccacagtggggagcaagttccgcagctctctgtacttgcttatggaaaccctcaat
gcaaccacaccccactatgtccgatgcatcaagccaaatgatgaaaaattacccttcgaa
ttcgactctaaaaggattgttcagcagctgcgagcctgcggcgttttagaaacaattcgc
attagtgcgcagagctacccttccaggtggacatacattgagttctacagtcgctatggt
gtgctcatgaccaagcaggagctttcgttcagtgataaaaaggaggtgtgcaaggtggtt
ttacacaggctcatccaggattctaatcagtaccagtttggtaaaaccaaaattttcttc
agagcaggacaagtggcttatttagagaaactccgattggataagctcaggcagagttgt
gttgtgatacaaaagcacatccgtggctggctccagaggaaaaagtttctccgagaaaga
caagctgtcctgacaatccagcagtacttccggggtcagcaaactgtgaggaaagctgtt
accgcaacagccttaaaagaagcatgggcagccataatcattcagaagtactgtcgtgga
tatcttgtccgcagtctctaccagctgattcgtgtggccaccatcaccatccaggcctac
acccgaggactcttggcgaggaggaagtatcggaagatgctggaggagcacaaggctgtg
atccttcagaaatatgcacgggcgtggctggccaggcgcagattccagagtatccgacga
tttgtgctcaacattcagcttacttacagggtccagcgtttgcagaaaaagttagaagat
cagaacaaagagaaccatgggctggtggagaaagtgaccagcctggctgctcttcgagcc
agtgacatggagaagattcagaaactggaatcagaactggacagggcagctacccacagg
cacaattatgaggagaaggggaggaaatacaaggctgccatggaagagaaattggcaaag
cttcagaagcataattcagaactggaaatacaaaaagagcaaacagagctgcagcttcga
gagaagactgaagagttgaaagaaaaaatggacaacctcaccaagcagctctttgatgat
gtgcaaaaagaagagcgacaaagaatacttcttgaaaaaagtttcgaacggaaaacacaa
gactatgagaagcagatctgctctttgaaaaaagacattcaagctctcaaggatgagaaa
atgcacctgcagcaccaactggaggaagaacgtgtcacctccgatgccttaaagggggag
gtggcccacctgagcaagcaggcaaagacaatctctgaatttgaaaaggagatagagcta
cttcagacacagaagatagatgtagagaaacacgtgcaatcacaaaaacgggaaatgaga
gaaaagatgtccgagatcaccaaacaacttcttgaaagctatgacattgaagacgtaaga
agcaggctctctttggaagatttggaacatttaaatgaggatggagaactttggtttgct
tatgaaggactgaagaaagcaacacatgttttggaaagccatttccagtcccagaaggat
tgctatgaaaaggagattgaagctttgaacttcaaagtggtgcatctaagtcaagaaatc
aaccacctgcagaaattatttagagaagagactgatatcaatgaaagtatccgtcatgaa
gttaccaggctgacatcggaaaacatgatgatcccagacttcaaacagcaaatttcagag
ctggagaagcagaagcaagatctggaaatccgcctgaatgaacaaactgaaagcatgaaa
ggaaaactggaagaattgtccaaccagttgaaccgcaatcaagaagaggagggaacacaa
agaaagaccttagaggcccaaaatgaaatacacaccaaagagaaagagaagctgatcagt
aagattcaagaaatgcagcaggccagcgagctcttgaagaagcaatttgaaagtgaaagt
gaagtcaagagtagtttccgacaggaagcatctcggctcactatggaaaacagggatctt
gaagaggagttagacatgaaggacagagtgattaaaaagctccaagatcaagttaaaact
ctaagcaagacgattgaaaagggcaatgatgtgcacttgtcctcaagacccaaggagtat
cttggaatgctggaatacaagacagaagatgaggacaagctcattcaaaacctcattctc
gacttgaagcctcgtggtgtggtggtgaacatgatcccagggctgcccgctcacatcctg
ttcatgtgtgtacgctacgcagactctctaaatgacgccaacatgctcaagtccctcatg
aacagcaccattagtggcatcaagcaggtggttaaggaacatttagaagactttgagatg
ctatctttttggctttccaatacgtgtcatttcctcaactgcctaaagcagtacagtggt
gaagaggaattcatgaagcttaatagtccacatcagaataagaactgcttgaacaatttt
gacctttcagaatacagacagattcttagcgatgtggcaatacgaatatatcatcggttc
attgttgtaatggaaaataacattcaaccaataatagtgccgggcatgctggagtatgag
agcctgcaaggcatctccggcctgaagcccacgggcttccggaagcggtcatctagcata
gatgacacggacgcctacaccatgacctctgtcctgcagcagctgagctacttctacagc
accatgtgccagaacggcctggaccctgagctggtgaggcaggctgtgaagcaggtcttt
ttcttgattggggcggtcaccctgaacagcctcttcctgcgcaaggacatgtgctcctgc
agaaaagggatgcagatcaggtgcaacatcagctacttagaagaatggcttaaagataag
aatttgcagaacagcttggctaaggaaactttggagcctctctctcaggcagcctggttg
cttcaggtcaagaagaccacagacagcgatgccaaggagatctatgaacgctgtacctca
ctgtctgctgtgcagatcataaagatccttaattcatacacacctatagatgacttcgag
aaaagagtaactccatcctttgttcgcaaagtacaggctctcctaaatagccgggaggat
tcatcacagctgatgttggatacaaaatatctctttcaagttacctttccttttaccccc
tctccacatgctctggaaatgatccagatccccagcagttttaagctaggttttctcaat
agattatag
DBGET
integrated database retrieval system
