Leopardus geoffroyi (Geoffroy's cat): 123583390
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Entry
123583390 CDS
T10761
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03013
Nucleocytoplasmic transport
lgf03015
mRNA surveillance pathway
lgf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123583390 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
123583390 (ACIN1)
03015 mRNA surveillance pathway
123583390 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123583390 (ACIN1)
03041 Spliceosome [BR:
lgf03041
]
123583390 (ACIN1)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123583390 (ACIN1)
Spliceosome [BR:
lgf03041
]
Complex C
Other components
EJC/TREX
123583390 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
123583390
NCBI-ProteinID:
XP_045306339
LinkDB
All DBs
Position
B3:complement(73821214..73855790)
Genome browser
AA seq
1339 aa
AA seq
DB search
MLRRKYPSNSGGSRGVLSGNRGVDYGGGRSQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSISEEKGESDDDKPRKGERRSSRVRQARAAKLS
ECSQAAEEEEDQEAPSRNLRVRADRNLKTEEEEEEEEEEEEDEEEEEDDEGQKSRDVPVL
KQFEETEEREEIPRAKPEEVIDERSQTIRSQEQEGLERGGRVTRSQEEARRSHMARHQQE
KEMKTVSSLEEEEKEVKILKGFEEKSKSPSPPRLTEDLEKAPLVLQPEQNASEEETPPPL
LTKEASSPPSNTQLQSEEEIEPMEGPAPPVLIQLSPHNTDAEARELLISQHTVQLVGGLS
PLSSLADTKAESLAEKVPEESVLPLVQKNTLAECSTQKGLETESEKSAQPLPLKIEELAP
AKGITEESLKQLSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSSSSSSRSRSRSPDSS
GSQSPSSPRSKQRDGSQARTHTNPRGRSEMDSRSTSESRSRSRSRSASSNSRKSLSPGVS
RDSSTSYTETKDPSSGQEVATPPVPQLQVLEPKERTSTSSSIRMRRLSQPEPAEKHVTQR
LQPERGSPKKCEAEEAEPPAATQPQTSETQTSHLPESERIHHTVEEKEEVTMDTSENRPE
NEVPEPPVPIADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISVVSATKGVPAGNSDTEG
GQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAIVDLHADDSRISEDET
ERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPIPPQVSVEVALPP
PVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRP
FTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFL
CADYAEQEELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERAV
REQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKA
QEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKE
REKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRDTK
RHSRSRSRSTPVRDRGGRR
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgttgagacggaaatacccgagcaattccggaggaagccgaggagttctgagtggtaat
cgaggggttgactatggcggtgggcggagtcagctcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttgcagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggcgaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggagctacttaggcagcgtctggaacgtgaagcccgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcacccagaaaaagctcctctatttctgaagagaaaggtgaatctgatgatgataaa
ccaaggaaaggagaaagacgatcatccagggtcagacaggcaagagcagctaaactctct
gagtgcagccaggctgctgaggaggaagaggaccaagaggcaccttccagaaatctgcgg
gtcagagcagatcgaaatttgaaaacagaggaggaagaagaagaggaggaggaagaggag
gaagatgaggaagaggaagaagatgatgagggacaaaaatctagggatgtaccagtcctg
aaacagtttgaggaaacagaagagagggaagagatacccagagcaaaaccagaggaggtg
atagatgagagatcccaaaccataagatcccaggaacaggaggggttagagagaggaggg
agagttacaaggtcccaggaggaggccagaagaagtcatatggccagacatcagcaggag
aaagagatgaaaacagtttcttctcttgaggaggaagaaaaggaagtaaaaattttaaaa
ggctttgaggaaaaatcgaaatccccttcccctcctcgactgactgaagatctggagaag
gcccctcttgtgctacaaccagagcaaaatgccagtgaggaggaaactcccccaccttta
cttaccaaggaagcatcttctccaccatctaatacacaactccagagtgaagaagaaata
gagcccatggaaggcccagctccccctgtcctcattcagctgtctcctcataatacagat
gctgaggccagggagctattaatatctcagcatactgtccagttggtgggaggcctgtct
cctttgtccagtcttgcagacaccaaagcagaatctctagcagagaaagtgccagaggag
agtgtcctgcctctagttcagaaaaatacactagctgaatgctcaacccagaagggtctt
gaaactgagtcagaaaaatctgctcaaccactccctctaaaaattgaggaattagcaccg
gccaaagggatcactgaggaatctctgaaacagctgtctttggaacagaaggaaggcaga
agggcttctcatactcttctcccaagccacagattgaaacagtcagctgactcatcctca
agccggtcctcctcttcatcctccagttctagatcaagatcccgctctcctgacagctca
ggctctcaatctccctcatctccaagatccaagcagagagatggatctcaggcacgtact
cacaccaaccctcgtggtagatctgagatggactccagatcaacgtcagagtccaggtca
cgttcccgttcccgttcagcgtcaagcaacagcagaaaatctctgagccctggagtctcc
agagacagcagcaccagctacactgaaaccaaagatccctcttctggtcaggaggttgca
actccaccagtgccacaactgcaggtccttgagccaaaggagaggacttccacctcatcc
tctattcgaatgaggcgtttaagccaacctgagccagccgaaaagcatgtgacccagagg
ttacaacctgagcgggggagcccaaagaagtgtgaagctgaagaggcagagccaccagct
gccacacagccccaaacctcagagacccagacttctcacctaccagaatcagaaaggatt
catcacactgttgaggagaaggaggaagtgaccatggacacaagtgaaaacagacctgaa
aatgaggttccagaaccccccgtgcctattgcagaccaagtcagcaatgatgaccgccca
gagggcagtgccgaagatgaggagaagaaagagagctcgctgcccaaatcattcaagagg
aagatctccgttgtctcagctaccaagggggtgccagctggaaacagtgacacagagggg
ggccagcctggtcggaagcggcgttggggagccagcacagccaccacacagaagaagccc
tccatcagtatcaccactgaatcactcaagagcctcatccccgacatcaaacccctggcg
gggcaggaggctattgtggatcttcatgctgatgactcccgaatctctgaggatgagaca
gagcgtaatggtgacgatgggacacatgacaaggggctgaaaatatgccggactgtcacc
caggtagtacctgccgaaggccaagagaatgggcagagggaagaagaggaagaagagaag
gagcccgaagcagaaccccctatacctccccaggtttcagtagaggtggccttgccccct
cctgtggagcatgaagtaaagaaagtgactttaggagataccttaactcgacgttccatt
agccagcaaaagtctggagtttccattacaatagatgacccagtccgaactgctcaggtg
ccctccccgccccggggcaagatcagtaacatcgtccacatctccaatttggtgcgtccc
tttactttaggccaactaaaggaattgttgggacggacaggaactctggtggaagaggcc
ttctggattgacaagatcaaatctcactgctttgtaacgtactcaacagtagaggaagca
gttgccacccgcacagctctacatggggtcaagtggccccagtccaaccccaaattcctt
tgtgctgactatgctgagcaagaggagctggattatcaccggggcctcttggtggaccgt
ccctctgaaactaagacagaggagcagggggtaccacggcccctgcaccccccgccccca
cccccagcccagccaccacagcatccccgggcagaacagcgggagcaggagagggcggtg
cgggaacagtgggcagagcgggaacgggaaatggagcggcgggagcgaactcgatcagag
cgtgaatgggatcgggacaaagttcgagaagggccccgctcccgatcacggtcccgtgac
cgccgccgcaaggaacgtgcgaagtctaaagaaaagaagagtgagaagaaagagaaagct
caggaggaaccacctgccaagctgctggatgaccttttccgtaaaaccaaggcagctccc
tgcatctattggctcccgctgaccgacagccagattgttcagaaggaggcagagcgggct
gaacgggccaaggagcgggagaagcggcgaaaggagcaagaggaggaagagcaaaaggag
cgggagaaggaagcagagcgggaaaggaaccgacagctggagcgggagaagcgtcgagag
cacagcagagagagggacagggaaagagagagggaaagggagcgtgacaggggtgataga
gatcgggatagggagagggaccgggagcgaggcagggagagggaccgcagagacaccaag
cgccacagcaggagccggagtcggagcacacctgtgcgggaccggggcgggcgccgctag
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