Leopardus geoffroyi (Geoffroy's cat): 123584212
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Entry
123584212 CDS
T10761
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2 isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123584212 (NRDE2)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123584212 (NRDE2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
DUF4778
ING
Motif
Other DBs
NCBI-GeneID:
123584212
NCBI-ProteinID:
XP_045307809
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All DBs
Position
B3:complement(133822601..133878741)
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AA seq
1164 aa
AA seq
DB search
MALFPAFAGIGETSGSGSARKELDWLSNPSFCAGAITSLSQQTEAATALVSEGSPLTRSP
LKSEPSDESDTNKKPKQTSRKKKKEKKKKRKHHHKKTRRKHGRPSSSGSEPDSDSEKDKA
SRSIRDSKKESEKPNREGNAVADTGHRCVWLEDVQALTGETFRTDKKPDPANWEYKSLYR
GDIARYKRKGDSCLGINPKKQCISWEGAATEKKRSHKHVERYFTKKSVGLMNVDGVAVGG
KTEPPSSEPVSFIPVKGSDDVVPPVTTWLNPLGIYDQSTTQWLQGQGPSEQEPKQPDSQT
DREHALLKAKVEEFNRRVRENPRDIQLWMAFVAFQDEVMKSPGLYAIEEGEQEKRKRSLR
LVLEKKLAILERAIESNQSSVDLKLAKLKLCSEFWEPSALAKEWQKLIFLHPNDTALWQK
YLLFCQSQFSTFTVSKIHSLYGKCLSTLSAVKDGSILSHPALPGTEDAMFALFLQQCHFL
RQAGHSEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRVGEKGARGWRA
WMHQQERGGWVVISPDDDDDEPEDEDQEIREKSLPRWQIWLATERSRDQRHWRPWRPDKT
KKQTEEDCEDPERQVLFDDIAQSMIRLSSQDLQFQLVAAFLQFLGVPSGLSPPASCLYLA
MDENSIFDDGLHDEMPLTFLDLSFSGVSCVGCSDPLGRRRWTRGHNREGEEFIRNIFHLV
MPLFSGRERSQLCFSWLRYEIEKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNSF
CLWKQYAHLEWLLGNTEDARKVFDAALSMAGGRDLRDPELCELGLLYAGLEAELLPDPRG
AATARAVHVLTRLTEQGPCGPYSGQALAVHILKARKAYEHALQDCLGDGCVSAPAPSDSF
DRLPSLVKCFMLFQYLTVGIDAAVRVYEQVLAKLKGSVPPGGSGPEDGARAQGPHGALEA
VTLMHTSLLRFHTKVSLYPLAPLRQALSEALRLYPGNQVLWRAYVQIQSRSHTASETRRF
FDAVTRSTKLLEPWLFAIEAEKTRKRLVESVQRVDGREVHATIPETGLTHRIRALFENAL
RSDNGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVEHFPEEMQEV
LDLMTEKELRVRLPVEELALLLED
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgcaggcattggtgagacttccggtagcggcagcgccagg
aaagaattagactggctgagcaacccaagcttttgtgctggagccataacctctctgagc
caacaaactgaagcggccacagccctggtttctgaagggtcacctctgacaaggagccct
ctgaaatcagagccttcggacgaaagtgacactaacaaaaagcccaaacaaacaagcaga
aaaaagaagaaagagaaaaagaagaaaaggaagcatcaccacaagaaaaccaggagaaaa
catgggcggcccagtagcagtgggtctgagccagatagtgattctgaaaaggataaagct
tccagaagcattagagacagtaaaaaggaatccgagaaaccaaaccgagaagggaacgcc
gtcgctgatactgggcaccgctgcgtctggcttgaggacgttcaggctctcacgggggaa
accttcagaacagataagaaaccggatcctgcaaactgggagtataagtctctctaccga
ggagatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaag
cagtgcatatcctgggagggggctgccacagaaaagaagcgctcacacaagcacgtcgag
cgctatttcacgaagaagagcgtgggactgatgaacgttgacggagtcgccgttggcggt
aaaaccgaacctccctcatctgagccggtctcatttatcccagtgaagggctcggatgat
gtggttcctcctgttacgacctggctgaaccctctggggatttacgatcagtccaccacg
cagtggttacaaggacagggtccttcagagcaagaaccaaagcagccagactcccagaca
gacagagagcatgccctgctcaaggccaaggtggaggagtttaacaggagagttcgggag
aatccccgggatattcagctgtggatggcatttgttgcttttcaggacgaggtcatgaag
agccctggcctgtatgccatcgaggaaggagagcaggaaaagcggaagcggtctctgagg
ctcgttctggagaagaagctggccatcctggagcgggccatcgaaagcaaccagagcagc
gtggacctgaaactcgccaagctgaagctctgctccgagttctgggagccctccgccctg
gccaaagagtggcagaaactgatctttctgcatcccaacgatacagccctgtggcagaaa
taccttttattttgccagagccagtttagcacctttacggtgtcaaaaattcacagtctg
tacggcaagtgcttgagcaccttgtctgccgtgaaggacggcagcatcttatcgcacccc
gccctgccgggcaccgaggacgccatgtttgctctctttcttcagcagtgccacttcctg
cggcaggctggtcactctgagaaggcggtctctctgttccaggccatggtcgacttcacc
ttcttcaaacccgacagtgtgaaagacctgcccaccaaaggacaggtggaattctttgag
cccttctgggacagtggggagccccgggttggcgagaagggcgcccgaggctggagagcg
tggatgcaccagcaggagcggggcggctgggtggtcatcagtccagatgatgatgatgat
gagccagaagatgaggaccaggaaataagagagaagagtctgcccaggtggcagatctgg
cttgccaccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagacc
aagaagcaaaccgaggaagactgtgaggatccagagagacaggtgctgtttgatgacatt
gcacagtctatgatccgtctttccagccaggatcttcagtttcagctggttgcggccttt
ctgcagttcctgggcgtgccttctggcctcagccctccagcctcctgcctctacctggcc
atggatgagaacagtatcttcgatgacgggcttcatgacgaaatgccactgacttttctc
gacctttccttttccggtgtcagctgtgttggctgctcagacccactgggccgccggcgc
tggacccggggtcacaatcgagagggcgaggagttcatccgcaacatctttcaccttgtg
atgcctttgttttcaggccgggagaggtctcagctctgcttctcttggttacggtacgag
atcgagaaggtcatttggtgtctgcacactaaaaacaagaagaggctaaagtcacaggga
aagaactgcaagaaactagccaaaaatctcctgaaggagccggaaaaccgcaacagtttt
tgtctctggaagcagtacgcacatctggagtggctgcttggcaacaccgaggacgccagg
aaggtgttcgacgcggcgctcagcatggcggggggcagagacctgagggaccctgagctg
tgtgagctcggcctcctctacgccgggctggaggcggagctgttgccggacccgagaggg
gccgccacggcgcgagccgttcacgtactgaccaggctgacggagcaggggccctgcggg
ccctactccgggcaggcgctggccgttcacatcttgaaagctcggaaggcgtacgaacac
gcgctgcaggactgtttgggcgacggctgtgtctccgctccggctcccagcgactccttc
gaccgcctgcctagcctggtgaaatgcttcatgctctttcagtacttgaccgtagggatc
gatgcggccgtgcgggtgtacgagcaggtgctcgcaaaactgaagggctctgttccccca
gggggctccggcccggaggacggcgcccgcgcccagggcccccacggcgcgctggaggcc
gtgacgctgatgcacacgagcctgctcaggttccacacgaaagtcagcctttaccccctg
gctcctctgcgacaggctctctccgaggcgttaaggttgtacccaggcaaccaggtgctt
tggcgggcatacgtgcagattcagagcaggtcccacacagccagtgagaccagaagattt
ttcgacgcggtcaccaggtccaccaaactcttggagccttggttgtttgcgatcgaggcc
gagaaaacgaggaagagactggtggaaagtgttcagagggtagatggtagagaggtccat
gccacaattcccgagaccggcttgacacatcgcatcagagccctgtttgaaaatgcgttg
cggagcgacaacggcagccagtgccccttactgtggaggatgtacctgaattttttggtt
tccttaggaaacaaagaaaggagcaaaggcgtgttctacaaagcacttcagaattgtccc
tgggcgaaggtgctgtacctggacgccgtggagcacttccccgaagagatgcaagaggtc
ctggacctgatgacggagaaggagctccgggtgcgcctgcccgtcgaggagctggcgctt
ctgctggaggactag
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