Leopardus geoffroyi (Geoffroy's cat): 123585014
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Entry
123585014 CDS
T10761
Symbol
SEC16B
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgf04131
]
123585014 (SEC16B)
Membrane trafficking [BR:
lgf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
123585014 (SEC16B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
123585014
NCBI-ProteinID:
XP_045308748
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All DBs
Position
C3:49695790..49751190
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AA seq
1056 aa
AA seq
DB search
MEFWAPQWPPQPWGRPTAPSKDPDRGLQRDGNHRPVPRSWYNGERYHQWQDTHRSPQPQQ
DPRTDHQQPHYASRPGERRQPVLGVDYYEGGYPRQLYSRPGIEDPYQSYHSPTLREEYAY
GDYYYHRPPQQLQEERVPRRESPYMWQEDHRDQKYLSEHHHQNQNSLSKSRNSHKDSPAS
NTRPERPGDLFPESLLTGTQKNEPSLANESSLLRQHESGLSSSAYELSQYMGADLEPYDP
VASAAWSPIQAEDVSAAGPKAPMKFYISHVPVSFGPGGQLVCVGPSSPSDGQTALVELHS
MEIILSDSEEQEEMRTFSGPLIREDVHKVDIMTFCQQKAAQSRKSETQRSRDSALLWQLL
VLLCRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVANLINLTDEDWPVLSSGTPNLLTGE
IPPSVETPAQIVEKFTKLLYYGRKKEALEWAMKNHLWGHALFLASKMDPRTYSWVMSGFT
STLASNDPLQTLFQFMSGRIPQAATCCGDKQWGDWRPHLAVILSNQSGDLELHQRTIVTM
GDTLAGKGLVEAAHFCYLVAHVPFGHYTVKTDHLALLGSSHSQEFLKFATTEAIQRTEIF
EYCQMLGRPKSFIPSFQVYKLLYASRLADYGLASPALHYCEAIGTALLSQGESDHPVLLV
ELIKLAEKLKLSDPLVVDRRRDRDLEPDWLVQLRRRLKELAVSGVRARTVQKVTGDTGDL
CPAHSDASGVGGTTGNTFYHDLLGRQSHSEALGDRRALWPTPEQMGPGQPSSQHPIPHQP
SSCPAGGGVGQMGVPVPLYSVPEVCLPETGGCMAVTGPPGGEAWEETQQIYPPLENIVSQ
GSFQHPDGQKAVSKPQVPLIPRSRNVSESSTVSVKEDEEESSDEADKKSSPNPAQTEKLG
DVKENTKSSGFGWFSWFRSKPRSNASPSGEDSSDSPDSEETSGESSPPQAGPGLSLTSLP
EPQSLPGGPFSGATGEGGVQGPASGEGAAEGTGSGGLSGPEGVSSEFFYNPGVLLPPPPL
KGGVPLYNPSQVPQLSMATSLNRPNRLAQRRYPTQP
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggaattttgggctcctcagtggccacctcagccatgggggaggcccacagcaccatca
aaggatccagaccgagggcttcagagagatggaaaccatcggcctgttcctcgctcttgg
tacaatggagagaggtaccatcagtggcaagacacgcacaggagcccccagccgcagcag
gaccccaggacagaccaccagcagccccattatgcatccaggcctggagaaaggcgtcag
cctgttttgggagttgactattatgaaggtggttatcctcgtcagttgtattcaaggcca
ggcattgaggatccgtatcagagctatcattctccaaccctgagggaagaatatgcttat
ggagattattactaccacagacccccgcagcagctacaggaagaaagagtgccaaggcga
gagagtccttatatgtggcaggaagatcaccgagatcaaaagtacctcagtgagcatcat
caccaaaaccagaatagtctatccaagagtcggaactctcataaagacagtcctgcttct
aacactaggccggagaggcctggggacctgtttccggagagtctgctaacgggaacccag
aagaatgagccatcgctggccaatgagtccagccttctccggcagcatgagtctggtctc
agctctagcgcctacgagctcagtcagtacatgggagctgacttggagccctacgatccc
gtggcgtcggcagcttggagtccaattcaggctgaggatgtctcagcagctggtcccaag
gcacccatgaagttctacatctctcatgtgcctgtgagctttgggccaggaggtcagctg
gtgtgcgtgggtcccagctctcccagtgatggacagacggcccttgttgaactgcacagc
atggagattattcttagtgactctgaagaacaagaagagatgaggactttctcaggaccc
ctgatcagggaagatgtacacaaggtggacatcatgacattttgccagcagaaagcagct
cagagccgaaaatctgagacacagaggagcagagactcagctctactgtggcagttgttg
gttctcctttgtcgacagaatgggtccatggtgggatctgacatcgcggagctgctgatg
caagactgtaagaagctggagaagtacaagaggcagccgccagtggccaacctcatcaac
ctgaccgacgaggactggccagtgctgagctcagggaccccgaacctgctcaccggggag
attccccccagcgtggagacgcctgcacagatcgtagagaaattcactaaactgctctac
tacggcaggaagaaggaagccttggagtgggccatgaagaaccacttgtggggccacgct
ttgttcctcgccagcaagatggacccaaggacctacagctgggttatgagtggctttacc
agcacgctggcgtccaatgacccactgcagaccctcttccagttcatgtcgggaaggatc
ccacaggcagccacgtgctgtggggacaagcagtggggagactggaggcctcacttggcc
gtgattctgtcaaatcagagtggggacctggagctgcatcagcgcacaattgtcaccatg
ggggacactctggctgggaaggggctggtggaggcagcccacttctgctacctcgtggct
cacgtgcccttcggccactacaccgtgaagacagatcatctggccttgcttggcagtagc
cacagtcaagagtttttgaaatttgcaacaactgaggctatccagaggacggaaatcttc
gagtattgtcagatgctgggccgccccaaatccttcatcccttctttccaggtgtataag
ctcctttatgcttcccgtctggcagattatggccttgcgtccccggccttgcattactgc
gaagccattggcacggccctccttagccaaggagagagcgatcaccctgtgctattagtg
gaactcatcaagctagcggagaaactgaagctgtcagatcccttggttgtagacagacgc
agagaccgggacctggagccagactggctggtgcagcttcggaggcggctcaaggagctg
gcggtgagtggggttagagcccggacggtgcagaaggtcacaggagacactggggatctc
tgtcctgctcactcagatgcttctggagtcggaggaacaacaggaaacactttctaccat
gatcttttaggacgtcagagccactcagaagcccttggggaccgcagagccttgtggcca
acaccggagcagatggggccaggccagcccagctcacaacaccccattccccaccagccc
agttcctgtccagcaggaggaggtgtggggcagatgggggtccccgtgcctctttactcg
gttcctgaggtctgtctgccagagactggtggctgtatggctgtgacaggccctcctgga
ggagaagcctgggaagaaacccagcagatatatccacctcttgagaatatagtatctcaa
ggaagtttccagcatccagatggtcaaaaggctgtttccaaaccccaggtgccgctgatt
cccagatcacgaaacgtttctgagagttccaccgtttcagtcaaggaggatgaggaggaa
tcctccgatgaggcagataaaaaatcctccccaaatccagcacagacggaaaagctagga
gatgtgaaagagaacacaaagagctcagggtttggctggttcagctggtttcgctcgaag
cccagaagcaacgcatccccttctggagaagactcgtccgacagtcccgactctgaggag
acctccggagaatcttctccccctcaggccgggcccggcctctcactgacatctctccca
gagccccagtctctgccaggaggccccttctctggggccacaggcgagggcggagtgcaa
ggacctgcgtccggtgagggagcggccgagggcacgggcagtggaggcttgtctgggcct
gagggtgtttcctctgagtttttctacaaccctggtgttctgctccccccaccccccttg
aaaggaggtgttcctctctacaacccatctcaggtcccccagctctccatggctactagc
ttgaaccggccgaatcgcctagcccagcgccgctatccaacccagccgtga
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