Leopardus geoffroyi (Geoffroy's cat): 123585046
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Entry
123585046 CDS
T10761
Symbol
TNN
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04151
PI3K-Akt signaling pathway
lgf04510
Focal adhesion
lgf04512
ECM-receptor interaction
lgf05165
Human papillomavirus infection
lgf05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123585046 (TNN)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123585046 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123585046 (TNN)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123585046 (TNN)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123585046 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lgf00536
]
123585046 (TNN)
Glycosaminoglycan binding proteins [BR:
lgf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123585046 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Ig_DSCAM-DSCAML_C
DUF4998
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_Teneurin
EGF_TEN
Phage_T7_55
EGF_2
REJ
EGF_Tenascin
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
123585046
NCBI-ProteinID:
XP_045308783
LinkDB
All DBs
Position
C3:complement(52306319..52369866)
Genome browser
AA seq
1472 aa
AA seq
DB search
MGLRGMFCFPLGLLFGSVLLVASAPATLEPQGCSDKEPQVTVSHTYKIDVPKSALVQVET
DPQPLSDDGASLLASVGAEEQNIIFRHNIRLQTPQKDCELAGSVQALLARVKKLEEEMAE
VKERCDVQRCCRGVAGANGHCSGHGTFSPETCGCRCEQGWEGASCERPACPGACSGHGRC
VDGRCECYAPYVGVDCAYPACPENCSGHGVCVRGACRCHEDFTSEDCSERRCPGDCSGHG
FCDTGECYCEEGFSGPDCAQVVAPQGLQLLKSTEDSLLVSWEPASEVDHYLLSYYPLGEE
LSGKQIQVPKEQHSYEILGLLPGTKYMVTLRNVKKEVSSRPQHLLATTDPAVLGTAWVTE
ETESSLDVEWENPPTEVDYYKLQYGPLTGQEVAEVTVPRSSDPKSRYDITGLQPGTEYRI
TVIPMKGELEGKPILLNGRTEIDSPTNVVTDRVTEDTAVVSWTPVQAVVDKYVVRYTSAD
GDTRDMAVPREQSSTVLTGLKPGEAYRVYVWAERGSQESKKADTKALTDIDSPQNLVTDR
VTENTATVSWDPVQAVIDRYMVRYTSADGDTGEVPVGKEQSSTVLRGLRPGVEYTVQVWA
QKGTREGKKADTTAPTDIDSPTNLVTDRVTENTATVSWDPVQAIIDRYMVHYTSADGDTG
EVPVGKEQSSTVLTGLRPGVEYTVQVWAQKGARESKKANTTAPTDIDSPQNLVTDRVTEN
TATVSWDPVQAVIDRYMVRYTSADGDTGEVPVGKEQSSTVLTGLRPGVEYKVQVWAQKGA
RESKKADTMAPTDIDSPTNLVTDRVTENTATVSWDPVQAIIDRYMVHYTSADGDTGEVPV
GKEQSSTVLTGLRPGVEYTVQVWAQKGARESKKANTTAPTDIDSPQNLVTDRVTENTATV
SWDPVQAVIDRYMVRYTSADGDTGEVPVGKEQSSTVLRGLRPGVEYTVQVWAQKGARESK
KADTMAPTDIDSPQNLVTDRVTENTATVSWDPVQAIIDRYMVRYMSADGDTGDVPVGKEQ
SSAVLTGLRPGVEYTVQVWAQKGARESKKVDTMAPTDIDSPQNLVTDRVMENTATVSWDP
VQAVIDRYMVRYTSADGDTGEVPVGKEQSSTVLTGLRPGVEYTVQVWAQKGAQESKKADT
TALTDIDPPKNLRPSAVTQSGGVLTWTPPSAQIDGYILTYQLPDGTVKEIQLGRGNERLE
LQGLEQGIAYPVSLVAFKGDRRSRSVSTTLSTVGARFPHPSDCSQVQQNSNVASGLYTIY
LHGDASRPLQVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRTYVEGFGDPMKEFWLGLDQL
HNLTTGTATRYEVRVDLQTANESAYAVYDFFQVASSKERYKLSVGKYRGTAGDALTYHNG
WKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNGRYGETKHSEGVNWEPWKGHEFSI
PYVELKIRPHGYSGEHVLDRKKRTLGENSRMF
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccgggggatgttctgcttccctctggggctcctctttggctctgtgctgttg
gtggcctcagccccggccaccctcgagcctcagggctgcagtgacaaggagccacaggtt
actgtcagccacacctacaagattgatgtgcccaagtccgctctggtccaggtcgagact
gacccccagccccttagtgacgatggggcctcgctcctggcctcagtgggggccgaggaa
cagaacatcatcttcaggcacaacatccgcctgcagacgccacagaaggactgtgagctg
gcaggcagcgtccaagccctcctggcccgagtcaagaagctggaggaagagatggcggag
gtgaaggagcggtgtgatgttcagcgctgctgccgaggagttgccggtgccaacggccac
tgcagcggccacgggaccttctcccccgagacctgcggctgccgctgcgagcagggctgg
gagggcgcctcatgtgagcggcccgcctgccccggggcgtgcagcggccatgggcgctgc
gtggacggccgctgcgagtgctacgcgccctacgtgggcgtcgactgcgcctaccccgcc
tgccccgagaactgcagcggccacggtgtgtgcgtgcgcggcgcgtgccggtgccacgag
gactttacgtccgaggactgcagcgagcgccgctgccccggcgactgcagcggtcacggc
ttctgcgacacgggcgagtgttactgcgaggagggctttagcggcccggactgcgcccag
gtggtggccccccagggtctgcagctgctcaagagcacggaggattccctgctggtgagc
tgggagccggccagcgaggtggaccactacctcctcagctactaccccctgggagaggag
ctctctgggaagcagatccaagtgccgaaggagcagcacagctatgagatccttggtttg
ctgcctggcaccaagtacatggttaccctgcgcaacgtgaagaaggaggtttccagccgc
ccacagcatctgcttgccaccacggatccggctgtgcttggcaccgcgtgggtgacagag
gagactgagagctccctggatgtggagtgggagaacccccctactgaggtggactactac
aagcttcagtatggccctctgacagggcaggaggtggctgaggtcaccgtgcccaggagc
agtgaccccaagagccgatatgacatcactggtctacagcctggaacagagtataggatc
actgtcatccccatgaagggagaactggagggcaagccgattctcctgaacggccgcaca
gaaatcgatagcccaaccaacgtggtcaccgaccgagtgacagaagacacagcggtagtc
tcctggaccccagtccaggctgttgtagacaagtacgtggtgcgctacacctctgctgat
ggggacaccagggacatggcggtgcccagggagcagagcagcaccgtcctgacgggcctg
aagccgggagaggcgtacagagtctacgtgtgggccgagaggggcagccaggagagcaag
aaggccgacaccaaggccctcacagacattgacagcccccaaaacctggtgaccgaccgg
gtgacagagaacacggccaccgtctcctgggacccggtgcaggccgtcatcgacaggtac
atggtgcgctacacgtctgccgatggagacaccggggaggtgccggtggggaaggagcag
agcagcaccgtgctgaggggcctgaggccgggcgtggagtacacggtccaggtgtgggcc
cagaaggggacccgagagggcaagaaggccgacaccacggccccgacagacattgacagc
ccaacaaacctggtgaccgaccgggtgacagagaacacggccaccgtctcctgggacccg
gtgcaggccatcatcgacaggtacatggtgcactacacgtccgccgatggagacaccggg
gaggtgccggtggggaaggagcagagcagcaccgtgctgacgggcctgaggccgggtgtg
gagtacacggtccaggtgtgggcccagaagggggcccgggagagcaagaaagccaacacc
acggccccaacagacattgacagcccccaaaacctggtgaccgaccgggtgacagagaac
acggccaccgtctcctgggacccagtgcaggccgtcatcgacaggtacatggtgcgctac
acgtctgccgatggagacaccggggaggtgccggtggggaaggagcagagcagcactgtg
ctgacgggcctgaggccgggcgtggagtacaaggtccaggtgtgggcccagaagggggcc
cgggagagcaagaaggcggacaccatggccccgacagacattgacagcccaacaaacctg
gtgaccgaccgggtgacagagaacacggccaccgtctcctgggacccggtgcaggccatc
atcgacaggtacatggtgcactacacgtccgccgatggagacaccggggaggtgccggtg
gggaaggagcagagcagcaccgtgctgacgggcctgaggccgggtgtggagtacacggtc
caggtgtgggcccagaagggggcccgggagagcaagaaagccaacaccacggccccaaca
gacattgacagcccccaaaacctggtgaccgaccgggtgacagagaacacggccaccgtc
tcctgggacccagtgcaggccgtcatcgacaggtacatggtgcgctacacgtctgccgat
ggagacaccggggaggtgccggtggggaaggagcagagcagcaccgtgctgaggggcctg
aggccgggcgtggagtacacggtccaggtgtgggcccagaagggggcccgggagagcaag
aaggcggacaccatggccccgacagacattgacagcccccaaaacctggtgaccgaccgg
gtgacagagaacacggccaccgtctcctgggacccggtgcaggccatcatcgacaggtac
atggtgcgctacatgtctgccgatggagacaccggggacgtgccggtggggaaggagcag
agcagcgccgtgctgacaggcctgaggccgggcgtggagtacacggtccaggtgtgggcc
cagaagggggcccgggagagcaagaaggtggacaccatggcccccacagacattgacagc
ccccaaaacctggtgaccgaccgggtgatggagaacacggccaccgtctcctgggaccca
gtgcaggccgtcatcgacaggtacatggtgcgctacacgtctgccgatggagacaccggg
gaggtgccggtggggaaggagcagagcagcaccgtgctgacgggcctgaggccgggcgtg
gagtacacggtccaggtgtgggcccagaagggggcccaggagagcaagaaggccgacacc
acggccctgacagacatcgaccctcccaaaaaccttcgtccatctgccgttacacagtcc
gggggggtgttgacctggacgcccccctctgctcagatcgatggctacattctgacctac
caactcccagatggcaccgttaaggagatacagcttggaagagggaatgagagacttgag
ttgcaaggccttgagcagggcatcgcctacccagtctccttggttgcctttaagggtgat
cgtcggagcaggagtgtatctaccaccctttccacagttggtgcccgttttccacatcct
tccgactgcagtcaagttcagcagaacagcaatgtcgccagcggtctatataccatctac
ctgcatggtgatgccagccggcccctgcaggtgtactgtgatatggacacggacggaggt
ggctggattgtcttccaaaggcgcaacactggacagctggatttcttcaagcgctggcgg
acctacgtggaaggctttggggaccccatgaaggagttctggcttggactcgaccagctg
cacaacctcaccactggcactgccacccggtatgaggtgagagtggacctacagacagcc
aacgagtccgcctatgccgtgtatgatttcttccaggtggcctccagcaaggagcggtac
aagctctcagtcgggaaatacagaggcacggccggggatgctcttacttaccacaacgga
tggaagtttacaacttttgacagagacaacgatattgccctcagcaactgtgccctgaca
catcatggtggctggtggtataagaactgccacttggccaaccccaacggcagatacggg
gagaccaaacacagtgagggggtgaactgggagccatggaaaggacatgaattctccatt
ccttatgtggagttgaaaatccgccctcatggctacagtggagagcacgtcctggacaga
aagaagcggacactaggagaaaattcgagaatgttctga
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