Leopardus geoffroyi (Geoffroy's cat): 123586122
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Entry
123586122 CDS
T10761
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lgf01002
]
123586122 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgf04121
]
123586122 (VCPIP1)
Enzymes [BR:
lgf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123586122 (VCPIP1)
Peptidases and inhibitors [BR:
lgf01002
]
Cysteine peptidases
Family C64
123586122 (VCPIP1)
Ubiquitin system [BR:
lgf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
123586122 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
123586122
NCBI-ProteinID:
XP_045310994
LinkDB
All DBs
Position
C3:136762909..136793114
Genome browser
AA seq
1223 aa
AA seq
DB search
MSQPPPPPPLPPPPPPPEAPQTPPSLAAAAAAAPPGGLSKRRDRRILSGSCPDPKCQARL
FFPASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVK
VMGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTV
GYGKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHAL
RENLKQHFQQHLAQYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANV
LHRPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGRDGHLNKPICIAWSSSGRNHYIPL
VGIKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAME
EVFMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSEL
HVPPEWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNNLVCSYDSVKDVLVPDYGLSNLTAC
NWCHGTSVRRVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEW
GGRVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKK
NPDDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQ
NITEQAAVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIR
ITTNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPV
PLQHGDRITIEILKSKAEGGQSAAAHSAHTVKQEEIAVTGKLSKELQEQADKEMYSLCLL
ATLMGEDVWSYAKGLPHMFQQGGVFYNIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRL
ELCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQL
HNVTAFQGKGHSLGTASSNPHLDSRAREAPVVRKHNTGTDFSTSSIKIEPSVFTAAPSNS
ELIRIAPGVVTMRDSRQLDPDLVEAQRKKLQEMVSSIQASMDKHLRDQSTEQPPSDLPQR
KAEVVSSSVKSGSLQTGLPESFSLTGGTENLNIETTDSCVAEALGAAFATRSKAQKGNSV
EEPEEMDSQDAEMTNTTEPMDHS
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgccgccgccgcctccgctgccgccgccacctcctccccctgaggctccg
cagactccgccgtccctggcggcggcggcggcggcggctcctccgggggggctctcgaaa
cggagagaccggagaatcctctctgggagctgcccggatccgaagtgccaggcgcgtctg
ttcttcccggcctccggttctgtcagcatcgagtgtaccgagtgcggacagcggcacgag
cagcaacagctgctgggggtggaggaggtgaccgacccggacgtagtgctacacaacctg
ctgcggaacgcgctgcttggggtgacaggggcacccaagaagaacacggaactggtaaag
gtgatgggcctttctaactaccactgcaaattgttgtcgcccatattagctcgctatgga
atggataaacagacaggcagggctaagcttctccgggacatgaaccagggcgaactgttc
gattgcgctttgctaggtgaccgcgccttcctcatcgaaccagagcatgttaacacagtg
ggctatggcaaggaccgctccggaagcctcctgtatttgcatgacacacttgaggacatc
aagcgggccaataaaagccaggaatgcctcattccagttcatgtggacggggatggacac
tgcttggtgcatgctgtgtcccgtgctctagtaggccgggagctcttctggcatgccttg
agagagaatcttaaacagcactttcagcagcacctggcccaatatcaagccctgttccat
gacttcattgatgccgctgaatgggaggatattatcaatgagtgtgaccctctgtttgta
ccacctgagggtgttcccttgggcctgaggaacatccacatatttggccttgccaatgta
ttacatcgccctattattctgctagattctctcagtggcatgagaagctctggtgattat
tcagccacctttctgcctgggctcatccctgcagagaagtgcacagggagagatggtcat
ttgaacaaaccaatctgtattgcatggagtagctctggtagaaaccattatatccccttg
gtaggcataaaaggggctgctttgcccaaattgcctatgaatttgttgcctaaagcatgg
ggtgtgcctcaggaccttattaaaaagtacattaaacttgaggaggatggtggttgtgtt
attggaggagacagaagtttgcaggataaatacttacttaggcttgtggctgctatggaa
gaagtctttatggacaaacacggtatccatcctagtttggttgctgatgtccatcagtat
ttctacaggaggactggggtgataggagttcagcctgaagaagttacagcagctgctaaa
aaagcagtaatggataatcgccttcacaaatgtttgctctgtggtgccctttctgaactt
catgttcctccagagtggttggctccaggagggaaactgtataacctggcaaaaagtact
catggacagctgaggcctgacaaaaattatagctttcccttgaacaatttagtttgctca
tatgattcagtgaaagatgttctggtaccagactatggattgagtaacctgacagcctgt
aattggtgccatggcacatctgtgcgaagggtcagaggagatgggtctattgtgtatttg
gatggggacagaactaattctaggtccactggtggcaaatgtggttgtggattcaaacat
ttttgggatggtaaagagtatgacaatctaccagaagcttttcctattactttggaatgg
ggtggaagagtggtcagagaaacagtatattggttccagtatgaaagtgattcatctttg
aatagtaatgtttatgatgttgcaatgaaacttgttaccaagcactttccaggtgaattt
gggagtgaaatcctagttcagaaagttgtccatactatactgcatcagactgccaaaaag
aatcccgatgattatactcctgtaaatatagatggtgctcacgcccaaagagttggagat
gtacaaggacaagagtcagagtctcagctcccaactaaaattattcttactggacagaaa
acaaaaactttgcacaaggaggagttaaacatgagtaaaactgaaagaactattcaacag
aatattacggaacaggctgctgtaatgcagaaacggaaaacagagaagttaaaacaagaa
caaaaagggcaacccaggactgtttctcctagtaccattcgtgatggtccgtcctctgca
cctgctacccctaccaaggctccatattcaccaacaacttcaaaggaaaagaagatccga
ataacaactaatgatggacgacagtccatggttacacttaaatcttcaacaacctttttt
gaacttcaagaaagcatagccagagaatttaacattcctccatatttacagtgtattcga
tatggctttcctcctaaagagttaatgccaccccaggcaggaatggaaaaggagccggtt
cctttacagcatggtgacagaattacaatagagattctaaaaagtaaagcggaaggtggt
cagtctgctgcagcacactctgcccacactgtgaaacaagaagagattgctgttactggt
aaactatccaaggaacttcaggagcaagctgacaaagaaatgtactccttgtgtctttta
gcaacattaatgggagaagatgtatggtcttatgcaaaggggcttcctcacatgttccag
cagggtggagtgttctacaatattatgaagaaaaccatgggtatggctgacggcaagcat
tgtacttttccacatctgcctggcaaaacctttgtctataatgcttctgaagatagactg
gagttgtgtgtggatgctgcaggacatttccccatcggtcctgatgttgaagatttagtt
aaagaggctgtaagtcaggttcgagcagaggctactacaagaagtagagaatccagtccc
tcacatgggctattaaaactaggtagtggtggagtagtgaaaaagaaatctgagcagctt
cataacgtaactgcctttcaggggaaagggcattctctaggaactgcatccagtaaccca
caccttgattcaagagctagggaagccccagttgtacggaagcataacacagggacagac
tttagtactagttccattaaaatagagccttctgtattcacagctgctcctagtaatagt
gagcttattcgaatagctcctggagtagttacaatgagagacagcaggcagcttgatcct
gatttggttgaggcccagcgaaaaaaattgcaggaaatggtttcttctatccaggcttca
atggacaagcacttgcgggatcaaagtacagagcagccaccatctgatcttcctcaaagg
aaagcagaagttgtgagttcttctgtgaagtctgggagtcttcagactggcttacctgaa
tctttttccttaactggtggcactgaaaatttgaatatagaaacaactgatagctgtgtg
gcagaggcactgggagcagcatttgccacaaggtcaaaagcacaaaagggaaattcagtg
gaggagcctgaagagatggatagccaagatgctgaaatgacaaacacaactgagccaatg
gatcactcttga
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