KEGG   Leopardus geoffroyi (Geoffroy's cat): 123586175
Entry
123586175         CDS       T10761                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lgf04131]
    123586175 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lgf04147]
    123586175 (COPA)
Membrane trafficking [BR:lgf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    123586175 (COPA)
Exosome [BR:lgf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   123586175 (COPA)
  Exosomal proteins of bladder cancer cells
   123586175 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 123586175
NCBI-ProteinID: XP_045311073
LinkDB
Position
C3:complement(4963993..5010974)
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIAGKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATDGLGDDALGRGQEEGGGWDVEEDLELPPELDVPPGAAG
GADDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLRLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDACQLSYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQV
CKVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctgaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccttggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtacccttattgacaagtttgatgaacatgatggtccagtacgaggcatcgacttccat
aagcagcagccgctgtttgtctctggaggagacgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacattgcttgggcatttagactacatccgcaccacgttt
tttcatcacgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacagggcacaaccattatgtaatgtgt
gctcagtttcacccctcagaagacctggttgtgtcggccagcctggaccagactgtgcgt
gtttgggatatttccggtctgaggaagaagaacttgtcccctggcgcagtggagtccgac
gtgagaggaatcaccggggttgatctgtttggaactacggatgcggtggtgaagcacgtg
ctggagggtcatgatcgcggagtaaactgggctgccttccaccccactatgccccttatt
gtatctggggcagatgaccgccaagtgaaaatctggcgcatgaacgagtcaaaggcgtgg
gaggttgacacctgtcgcggtcattacaacaacgtgtcttgtgccgtcttccacccccgc
caagagctgatcctcagcaattctgaggacaagagcatccgcgtctgggatatgtccaag
aggactggggttcagaccttccgcagggaccacgatcgtttctgggtcctggccgcccac
cccaacctgaacctctttgcggcaggccatgatggtggcatgattgtgtttaaactggaa
cgggaaaggccagcctacgctgttcacggcaatatgctgcattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagcggtgatgcagctgcggagtggt
tccaagttcccggtgttcaatatgtcgtacaatccagcagaaaatgcagtcctgttgtgt
acgagagccagcaacttggagaatagcacctatgacctgtacaccatccccaaggacgcg
gattcccagaatcccgacgctcccgaagggaaacgatcctcaggcctgacggccgtttgg
gttgctcgaaaccggtttgctgtcctggatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgcgatgagatcttttatgctggc
acaggaaacctcctgctccgagatgcagaatccatcacgctctttgacgtacaacagaag
cggactctggcatctgtgaagatttccaaggtgaaatacgttatctggtcagcagacatg
tctcatgtagcactactggccaaacatgccattgtgatctgtaaccgcaaactggaggct
ctgtgtaacattcatgagaacattcgcgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgccgtcaccactggggactacgggatc
atccgaactctggatttacccatctatgtcacgcgggtgaagggcaacaatgtgtattgc
ctggatagggagtgtcgtcctcgggtgctcaccattgatcccacggagttcaagttcaag
ctggccctgatcaacagaaaatatgatgaggtgctgcacatggtgagaaatgcgaaacta
gttggccagtctatcatcgcttacctccagaagaagggctaccctgaggtggccttgcat
ttcgtcaaggacgagaaaactcgctttagcctggcactggagtgtgggaacatcgagatt
gctctggaagcagccaaagcactggatgacaagaactgctgggaaaagctgggagaagtg
gccttgctacaggggaaccaccagattgtggaaatgtgttatcaacgcaccaaaaacttc
gacaaactttctttcttgtaccttatcactggcaacctggagaaacttcgcaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaatgcactctacctgggt
gacgtgtctgagcgggtgcggatcctgaagaattgtgggcagaagtccctggcctatctc
acagctgctactcatggcttagatgaagaagccgagagcctgaaggagacatttgaccca
gagaaggagacgatcccagacattgaccccaatgccaagctgctccagccacctgcgcct
atcatgccattggataccaattggccgttactgactgtatccaaaggcttctttgaaggc
tccattgccggcaagggcaagggaggagccctggctgctgatattgacattgacactgtt
ggtaccgaaggctggggagaggatgcggagctgcagctggatgaagatgggtttgtggag
gctacggatggcctgggggatgacgctcttggcaggggacaggaagaaggaggcggctgg
gatgtggaagaggacctggagctccctcctgagctggatgtaccccctggggcagccggg
ggagctgacgacgggttctttgtgcctcccaccaagggaaccagcccaactcagatctgg
tgcaataactctcagcttccagtcgatcacatcctggcaggctcttttgaaacagccatg
cggctccttcacgaccaggtgggggtgacccagtttggcccctacaagcaactgttccta
cagacctatgcccgaggccgcaccacctatcaggctctgccctgcctgccctccatgtat
ggctaccctaatcgcaattggaaggatgcggggctgaagaatggtgtgccagccgtgggc
ctgaggctcaatgacctcattcagcggctacagctatgctaccagctcaccacagttggc
aagttcgaggaggccgtggaaaaattccgttccattttactcagtgtgcccctcctcgtc
gtggacaataagcaggagattgcggaggcccagcagcttatcaccatttgccgtgagtac
attgtgggcctgtccatggagatagaaagaaagaagcttcccaaagagactctggaacag
cagaagcgcatctgtgagatggcagcctatttcacccactccaacctgcagcctgttcac
atgatcctggtgctgcgcacggccctcaacctcttcttcaagctcaagaactttaagaca
gctgccacctttgctcggcgcctgttggaacttgggcccaagccagaggtggctcaacag
acccgcaaaattctgtctgcgtgtgagaagaaccccacagacgcctgccagctcagctac
gacatgcacaacccctttgacatctgtgctgcgtcttaccggcccatctaccgtgggaag
ccagtggagaaatgtccactcagtggggcctgctattcccctgagttcaagggtcaagtc
tgcaaggtcactacagtgacagagattggcaaagatgtcattggtttaaggatcagtcct
ctgcagttccgctga

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