Leopardus geoffroyi (Geoffroy's cat): 123586373
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Entry
123586373 CDS
T10761
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04390
Hippo signaling pathway
lgf04530
Tight junction
lgf05165
Human papillomavirus infection
lgf05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
123586373 (SCRIB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
123586373 (SCRIB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
123586373 (SCRIB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123586373 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_LRWD1
Pept_S41_N_bact
MscS_porin
Motif
Other DBs
NCBI-GeneID:
123586373
NCBI-ProteinID:
XP_045311450
LinkDB
All DBs
Position
C3:71286635..71308288
Genome browser
AA seq
1645 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRL
PEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLD
LGGNELEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENRLEELPSELG
GLLLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENL
LTALPRSLGKLTKLTNLNADRNRLEVLPPEIGGCVALSVLSLRDNRLAALPPELAHTAEL
HVLDVAGNRLRSLPFALTHLNLKALWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQP
PPSLEEPGQRSPLESWSDAPLGRVSVIQFLEVPACGDDAEEAAAEKRGLQRRATPHPSEL
KVMKRGVEERRGEALACRPESGPPSPLEEEKRLSTESGLSKDSQPSASTASQGDPEGPLT
ETQGPSQQEAGPGTPEEPAEETYEEPTVRFAEDTLLLPPREDGESEEGQPEAPWPLPGGR
QRLIRKDTPHYKKHFKISKLPQPEAVVALLQGAQPDREGPAGPGGWHSGLHTAWAPRDEE
EGEKEEEEEEAEEEAPPDEEEAEKEAAEEAALVSAPSIKGVSFDQANNLLIEPARIEEEE
LTLTIVRQTGGLGISIAGGRGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGV
ALHGAEHHQAVEALRGAGSTVQMRLWRERMVEPENAVTVTPLRPEDDYSPREWRGAALRL
PLLQPDPVGPLRQRHVACLVRSEKGLGFSIAGGKGSTPYRAGDGGIFISRIAEGGAAHRA
GTLQVGDRVLSINGVDMTEARHDHAVSLLTAASPTIALLLERGAGGPLPPSPPPPPPTPP
SVASTAVAAATPGESGPLRLAPSLPAATLEGPYPVEEICLPRAGGPLGLSIVGGSDHSSH
PFGIQEPGVFISKVLPRGLAARSGLRVGDRILAVNGQDIREATHQEAVSALLRPCLELVL
LVRRDPPPPGMRELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGR
DGRLRVGLRLLEVNQQSLLGLTHGEAVRLLRGVGDTLTVLVCDGFDTDAAAPAEVSPGVI
ANPFAAGIGRRNSLESISSVDRELSPEGSGKEKELPGQTPQWGLEAVGRGPEGLKLDHRT
LATTPGAGSTQRVLSGTAGGKMAEAPCSPSPSCQQLPSPPSPDALPTNVKQAYRTFAAVP
GPHPPQDTPAQVHGPTLPSPPTPGPAASPEQLSFRERQKYFELEVRLPQAEGPPKRVSLV
GADDLRKMQEEEARKLQQKRAQMMREAEGTGPPLDLDGEPPDEPEELPPPTSPTTGLGPS
SPLPPGGSAPVRTAKAERRHQERLRVQSPELPAPDRALSPAERRALEAEKRALWRAARMK
SLEQDALRAQMVLSKSQEGRSRRGPLERLAEAPSPAPTPSPTPLEDLGPQTSTSPGRLAL
SGRKFDYRVFAALPSSRPVYDLQSPDFAEELRSLEPSPGPGLQEEDGEVAVVLLGRPSPG
PEEVTLCSSRRPIRPGRRGLGPVPS
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatcccgctgtggcgctgcaaccggcacgtggagtcggtggacaagcgg
cactgctcgttgcaggccgtacccgaggagatctaccgctacagccgcagcctggaggag
ctgctcctcgacgccaaccagctgcgcgagctgcccaagcccttctttcgtctgctgaac
ttgcggaagctgggcctgagtgacaacgagatccagcggttgccgcccgaggtggccaac
tttatgcagctggtggagctggacgtgtcccggaacgacattccggagatccccgagagc
atcaagttctgcaaggccctggagattgcagacttcagcgggaaccctttgtctaggctc
ccggaaggcttcactcagctgcgcagcctggctcacctggccctgaatgacgtgtccctg
caggcgctgcccggggacgtgggcaacctcgccaacctggtgaccctggagctccgggag
aacctgctcaagtctttgcctgcgtccctgtccttcctggtcaagctggaacagctggat
ctgggaggcaatgagctggaagtgctgcccgataccctgggggctctgcccaatcttcga
gagctgtggctggaccggaaccagttgtccacactgcccccggagctcgggaacctgcgg
cgcctggtgtgcctggacgtgtcggagaaccggctggaggagctgccctctgagctcggc
gggctgctgctgctcacggacttgctgctctcccagaacctgctgcagcggctccctgat
ggcatcggtcagctgaaacagctgtccatcctgaaggtggaccagaaccgtctgtgcgag
gtgacggaggccatcggtgactgcgagaacctctcagaactgatcctcacggagaacctg
ctgacggctctgccccgctctctggggaagctgaccaagctgaccaatctcaacgcggac
cgcaaccgtctggaggtgctgccgcccgagatcggaggctgtgtggctctcagtgtcctt
tccttgagggacaaccgtctggccgccctgccgcccgagctcgcccacacggctgagctg
cacgtgctggacgtggctggaaaccggctgcggagtctgccgtttgcgctcacccacctc
aacctcaaggccctatggctggctgagaaccaggcacagcctatgctccggttccagacg
gaggacgacgcccagaccggcgaaaaggttctcacctgctacctgctgccgcagcagccc
ccacccagcctcgaggagccggggcagcggagccctttggagagctggagcgacgccccg
ctcggtcgcgtcagcgtcatccagtttctggaggtccctgcttgtggcgacgatgccgag
gaagctgctgctgagaagcggggcctgcaacgtcgggccacgcctcaccccagcgagctg
aaggtgatgaagaggggtgtcgaggaacgtcggggcgaagccttggcctgcaggcccgag
tctgggccaccctcgcctttggaggaggagaagaggctgagcaccgagtctggcctgagc
aaggactcacagccgtctgctagcacggcctcccagggtgaccccgaggggccgctgacc
gagacgcaggggccgagccagcaggaagccggcccgggcaccccagaggagcctgcggag
gagacttacgaggagcccacagtgcgcttcgcagaggacacgctgctgctgcccccaagg
gaagacggcgagagtgaggaggggcagccggaggcgccctggcccctgcccggtgggaga
caacgccttatccgcaaggacacgcctcactataagaagcacttcaagatttccaagctt
ccccagcccgaggccgttgtggctctgctgcagggagcacagccggacagggagggcccg
gcagggcctgggggctggcacagcggcctccacacagcctgggctcctcgggacgaagag
gaaggtgagaaggaagaggaggaagaggaggcggaggaggaggctcctccggacgaagag
gaggctgagaaggaggcggcggaggaggcggccctggtctccgcaccctccatcaagggg
gtgtcgtttgaccaggccaataacctgctgatagagcccgcacgcattgaggaggaagag
ctcacgctcaccatcgtgcggcagacggggggactgggtatcagcatcgctggtggcagg
ggttctacgccctacaaaggggatgacgagggtatattcatctctcgagtgtcagaggag
ggccctgcagcccgggcgggagtccgggtgggtgacaagctcctcgaggtgaacggcgtg
gccttgcacggtgccgagcaccaccaggccgtggaggcgctgcggggggccggcagcacc
gtgcagatgcggctgtggcgggagcgcatggtggaaccggagaacgcggtcaccgtcacg
cccctgcggccggaggacgactacagccctcgggaatggcggggagctgccctgcgcctg
cccctgctccagccggaccccgtcgggcccctccgccagcgccacgtggcctgccttgtg
cgcagcgagaaggggctgggcttcagcatcgccggcgggaaaggctccacgccttaccgg
gccggggatgggggcatcttcatttcccgcatcgcagaggggggcgctgcccaccgggcg
ggtactctgcaggtcggcgaccgagtcctctcgatcaatggggtggacatgaccgaagcc
aggcacgaccacgccgtctctctgctgaccgccgcttcccccaccatcgccctgctgctg
gagcgtggggccggagggccccttccccccagccctccgccacccccccccacacctccc
agtgtggccagcaccgccgtggccgctgccacccctggggagtctgggccgctgcggctg
gcccccagcctaccggctgccaccttggaggggccatacccagtggaggagatctgcctg
ccgagagccgggggcccactggggctcagcatcgtcgggggctctgatcactccagccac
ccatttggtatccaggagcctggcgtattcatctccaaggtgctcccacggggcctggct
gcacgcagcggcctccgggttggggaccgcatcctggcagtgaacgggcaggacattcgg
gaggccacgcaccaggaggcggtcagtgccctgcttcggccctgcctggagctggtcttg
cttgtgaggagggacccgccacccccgggcatgcgggaactctgtatccagaaagctccc
ggcgagaagctgggcatcagcatccgagggggcgccaagggccatgcggggaacccctgt
gaccccacagacgagggcatcttcatttccaaggtgagccccacgggagcagcggggcgt
gacggccggctgcgggtggggctgcggctgctggaggtgaaccagcagagcttgctgggc
ctgacacatggcgaggccgtgcggctgctgcgcggcgtgggcgacaccctcaccgtgctc
gtctgtgacggcttcgacaccgacgctgccgcccctgccgaggtgtccccgggtgtcatt
gccaacccctttgcggcaggaatcggccgccggaacagcctggagagcatctcctcggtc
gaccgggagctgagccccgagggctctggcaaggagaaggagctaccaggacagacccca
cagtggggactggaagctgtgggtcggggcccggagggcctgaagctggaccaccgcacc
ctggctaccacgcccggcgctggcagcacgcagagggtcctgtctggaacagccggaggg
aagatggccgaggctccctgctccccctcccccagctgccagcagctcccctccccgccc
tcccccgacgcactgcccaccaacgtgaagcaggcctacaggacctttgccgccgtgccc
ggcccacacccgccgcaggacacccccgcccaggtacacggacccactctccccagtccc
cccacacctgggcccgcggcctcccccgagcagctctctttccgcgagcggcaaaagtac
tttgaactggaggtgcggctgccccaagccgaggggccccccaagcgcgtgtccctggtg
ggtgccgacgatctgcgcaagatgcaggaggaggaagcccggaagctgcagcagaagaga
gcgcagatgatgcgggaggcagagggcaccgggccccccctggacctggatggggaaccc
cccgatgagccagaggagctgccacccccgaccagccccaccacagggctcggaccctcg
tcccccctgcctccgggaggcagcgccccggtgcgcacagccaaagcggagcggcgccat
caggagcgactccgtgtccagagccccgagttgcctgcgcccgatcgggctctgtcccct
gccgagcgccgtgccctggaggccgagaagcgcgcactgtggcgggcggccaggatgaag
tccctggaacaggacgccctccgagcacagatggtcctcagcaagtcccaggagggccga
agcaggcgcgggcccctggagcggctggcggaggccccctcaccggcgcccaccccgtca
cccaccccattggaagacctcggcccccagaccagcacctctcctggacgcctggccttg
tctgggaggaaatttgactacagggtgtttgcagccctcccttcttccagacctgtctat
gacctgcagtccccagattttgctgaggagctgaggtccttggaaccgtctcctggccct
ggcctgcaggaggaggacggagaggtggccgtggtgctcctgggcaggccctcgcctggc
cccgaggaggtgacgctgtgcagcagccgccgcccgatccggccagggcgccgcggcctg
ggcccagtgccctcctag
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