Leopardus geoffroyi (Geoffroy's cat): 123586852
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Entry
123586852 CDS
T10761
Symbol
OPTC
Name
(RefSeq) opticin isoform X1
KO
K08128
opticin
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lgf00535
]
123586852 (OPTC)
Proteoglycans [BR:
lgf00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
123586852 (OPTC)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRRNT
LRR_5
Motif
Other DBs
NCBI-GeneID:
123586852
NCBI-ProteinID:
XP_045312366
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All DBs
Position
C3:complement(27461152..27469508)
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AA seq
356 aa
AA seq
DB search
MKLLAFLSLLALVLLEAGTASPPKGRKRRDPTNEEGDSYAVLDLGNYVPDLDNYDEVIDL
SDYEGLMDYGDQLPEVKAGSSLDPPTRIGSTPSTVNPRTLSSKPTMTKPTMLGLPGSPRS
HAEPGLPTCLVCVCLGSSVYCDDADLESVPPLPKTTTYLYARFNRISRIRAGDFKGLTKL
KKIDLSSNSISSIDDDALRLLPALRDLILPENQLAALPVLPAGIEVLDVRLNRLQSSGIQ
PEAFRKLILTPEKGVLRHAIPRTSRKRKCRPHGLVTGNGGGGGGTRNEGQQLSLRLFRHM
ASRHVCPIHLSAPAAPAPLKPRLCWDLRSCWLQPSPYLKFGKKWALEKSPLLTDFL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctggctttcctgagcctgctggccctggtgctgctagaagcagggacagct
tctcccccaaaggggaggaagaggagagacccgacgaacgaggaaggagattcttacgcg
gtcctggatctggggaactacgtccctgacctggacaactacgatgaggtcattgacctg
agcgactatgaagggctcatggactatggggaccagctccctgaggtcaaagccggatcc
agcctggatcctccaaccaggatcggttccactccgagcacggtgaatccaaggacactc
tcgtccaagcccaccatgaccaagcctactatgctgggcctcccaggctccccacgcagc
cacgctgagccaggtctgcctacctgtctggtatgcgtgtgccttggttcctccgtgtac
tgcgacgatgctgacctggagagcgtcccgcctctccccaagacaaccacttacctgtat
gcccgcttcaaccgcatcagccggatccgagctggagacttcaaagggctgacaaaactg
aagaagatcgacctttccagcaattccatctcctccattgatgatgatgccctccgcctg
ctgcctgccctgcgggacctgatcctcccagagaaccagctggcagctctgcccgtgctg
cccgctggcatcgaggtcctggacgtccgcctgaaccggctccagagctccggaatacag
cccgaagccttcaggaaactgattctgactccagaaaagggtgtcttacgacacgccatc
ccaagaacttccaggaaaaggaaatgcaggcctcatgggcttgttactggaaatggggga
ggtgggggtggcaccagaaatgagggtcagcagctctccctccgcctcttccggcacatg
gcctctcggcacgtctgtcccattcacctctcggcacccgcagcacctgcgcccctaaaa
cctaggctgtgctgggacttgcgatcgtgctggctccaaccctcaccctacctaaaattt
ggaaaaaagtgggctttggaaaaaagcccactactaaccgattttctctga
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