Leopardus geoffroyi (Geoffroy's cat): 123587407
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Entry
123587407 CDS
T10761
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03022
Basal transcription factors
lgf05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123587407 (TAF4B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
123587407 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgf03021
]
123587407 (TAF4B)
03036 Chromosome and associated proteins [BR:
lgf03036
]
123587407 (TAF4B)
Transcription machinery [BR:
lgf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123587407 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
123587407 (TAF4B)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
123587407 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
123587407
NCBI-ProteinID:
XP_045313099
LinkDB
All DBs
Position
D3:48436545..48562607
Genome browser
AA seq
865 aa
AA seq
DB search
MPAGLTEPAGAAPPAGVSASGTVTMAPAGTLPVRVESTPVALGAVTKAPVSVCVESTVSQ
PLRSPVGTLVTKVASVSALPKLSSGPPLPAPQIVAVKAPNTTTIQLPANLQLPPGTVLIK
SNSGQLMLVSPQQAVTRAETTTNITSRPAIPTNTHTVKICTVPNSGSQLVKKVAVAPVKK
LAQIGTTVVTTVPKPSSVQSVAVPTASVVTVTPGKPLNSVTTLKPSNLGASPALSNDPSL
KAENSAAAQANLSPAMLENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIE
AEEFTRQLYVELKSSPQPHLVPFLKKSVIALRQLMPNSQSFIQQCVQQTCSEVVVATCTT
TAATSPVVTTTVCSIQPEKPIIVSGTTTASTVSVPALNPLAGPGGAKPGVVTLHSLGPPA
APVGTAAGTVLLQTPKPLVTSIQNTVTVSLPPEKPAVSGAAVTLALPAVTFGEPSAAAVC
LPSVKPVMTSAGTTSDKPVIAPVQIKLAPPGPVLSQPAGIPQAVKVKQLVVQQPSGGVAK
QVTTLPHSSALTIQKSGQKKMPVSTAIPASQFPPASILKQITLPGNKILSLQASPIQKNK
VKENGITSFRDEDDINDVASMAGVNLSEENACILATNSDLVGTLVQSCKDEPFLFIGALQ
KRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTTYKASENYILSSD
TRSQLKFLEKLDQLEKQRKDLEEREMLLRVAKSRSNKEDPEQLRLKQKAKELQQLELAQI
QHRDANLTALAAIGPRKKRPLESGSGSEKFGLKDNLLASGTSSLTATKQLLRPRITRICL
RDLIFCMEQEREMKYSRALYLALLK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgggtctcacggaaccggccggcgccgctcctcccgccggtgtgagcgcctcc
gggaccgtgaccatggcccccgctgggactctccctgtgcgggtggagagcactccggtg
gccttgggcgccgtgactaaggctcctgtcagtgtctgtgtggagtccacggtgtcccag
cccctgcggtcccccgtggggaccctggtgaccaaagtggcttctgtcagcgctcttcct
aaactcagcagcggtcctccgctgcctgctcctcagatagtcgctgtgaaagcccccaac
accacaacaatccagttgcctgctaatttgcagcttcctccaggaacagttttaatcaaa
agtaacagtggccagttgatgttggtatctcctcagcaagctgtgacaagagcagagacc
actactaacataacttcaaggccagctataccaacgaatactcatacggtcaaaatctgt
acagtgccgaattctggttcacagttagttaagaaagtggcagtggcacctgttaaaaag
ttggcacaaataggaactactgtggtaaccacggttccaaagccttcctcagtacagtct
gtggctgtgccaacagccagtgttgtcacagttactcctggaaagcccttgaattctgta
actaccctgaagccttcaaatttgggagcatcacctgccctctcaaatgatcccagtctc
aaagcagagaactcagcagctgctcaggcaaatctttctccggcgatgctagaaaatgtg
aagaagtgtaagaacttccttgccatgttaataaaactagcgtgtagtggatcacagtcc
ccagaaatggggcagaatgtgaagaaactggtggaacaacttttggatgcaaaaattgaa
gcagaagaatttactagacaactgtatgttgaactcaagtcttcacctcagcctcaccta
gttccttttcttaagaaaagtgtgattgccttacgacaactcatgcccaactcccagagc
tttattcagcagtgtgttcagcagacctgtagtgaggttgtcgttgctacctgtaccaca
acagcagccacttctcccgtggtgacaacaacagtttgctccatccagcctgaaaaaccc
atcattgtttctggaacaacaacagccagcaccgtgtcagtgccagctctgaatccactt
gctggcccagggggagcaaaaccaggagttgtgacacttcattctctgggtccacctgct
gcaccagtaggaacagcagctggaacggttttgcttcagactccaaaaccactggtgaca
tctatacagaacacagtcacagtctccctcccacctgagaagccagctgtctctggggca
gcagtcacgctggctctccctgcggtgactttcggagaaccttcggcagcagctgtctgt
cttccgtctgtgaaacctgtcatgacctctgctgggaccacatctgacaagcctgtcatt
gctccagtccagataaaacttgcaccaccaggccccgtcctttctcagccggctggtatt
ccacaggcagttaaagtcaaacaactagtagtccagcagccttcaggaggtgttgcaaaa
caagtgaccacacttccccattcctcagcattgaccattcagaaatctggacagaagaag
atgccagtgagcactgcaatacctgccagtcagtttcctccagcttccattttaaagcaa
attaccctaccaggaaataaaattctgtcactccaagcatctcctattcagaaaaataaa
gtaaaagagaatggaataacatctttcagagatgaagatgacatcaatgatgtggcttcc
atggcaggggtcaacctcagtgaagaaaatgcttgcatcttagcaacaaactctgacttg
gttggcacacttgttcagtcatgtaaagatgaaccatttcttttcattggagctctacaa
aagagaattttagacattggtaaaaagcatgacattacagaacttaactctgatgctgtg
aacttgatctcccatgcaacacaggagcgattacgaggccttctagaaaaactgactaca
attgctcagcatcgaatgacaacatacaaggcaagtgaaaattacatcctgtctagtgat
accagatcacagctcaaatttcttgaaaagctagatcaattggagaagcagagaaaggat
ttagaagaaagagaaatgctacttagggtagccaagagtcgttccaataaagaagatcca
gaacagctgagattaaagcagaaagccaaagagttacaacagttggagcttgcgcagata
cagcatagagatgctaacctcacagctcttgcagccattggaccaagaaagaagagacca
ctagaatctgggtctggaagtgagaagtttggcttaaaagacaatcttcttgcttctggg
acatccagcctgacagccaccaaacagttgcttcgtccaagaatcacaagaatctgtctc
agggacttgatattctgtatggaacaggaaagagagatgaagtattctcgagctctgtac
cttgcccttctgaagtga
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