Leopardus geoffroyi (Geoffroy's cat): 123588417
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Entry
123588417 CDS
T10761
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03082
ATP-dependent chromatin remodeling
lgf05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123588417 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
123588417 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123588417 (SS18)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123588417 (SS18)
GBAF(ncBAF) complex
123588417 (SS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
123588417
NCBI-ProteinID:
XP_045315293
LinkDB
All DBs
Position
D3:complement(48253439..48342852)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPIQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSVPVQNQMT
MSQGQPIGSYGPRPNMNMQPNQAPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgcgttcgcagccccgaggcagcgaggcaagggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcagcaaatgttgcatacgaacttggtctac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tctcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctattcagggaccgggaccc
aatcaactcaatatgacaaacagttccatgaacatgccttcaagtagccatggatccatg
ggaggttacaaccattctgtgccatcatcacagagcgtgccagtacagaatcagatgacg
atgagtcaagggcagccaataggaagctatggccccagaccaaatatgaatatgcaacca
aaccaagctccaatgatgcatcagcagcctccttctcaacaatacaatatgccacaggga
ggtgggcagcattatcaaggccagcagcctcctatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatgggtcagagacagattcctccttatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcacaatatggccaacagcaagatgcttaccaaggaccacct
ccccaacagggatatccaccccagcaacagcagtacccagggcagcagggctatccagga
cagcagcagggctacggtccttcacagggtggtccaggtcctcagtatcctaactaccca
caaggacaaggtcagcagtatgggggttatagaccaacgcagcctggaccaccacagccg
ccacagcagaggccttatggatatgaccagggacagtatggaaattaccagcagtga
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