Leopardus geoffroyi (Geoffroy's cat): 123588468
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Entry
123588468 CDS
T10761
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
123588468 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123588468 (MYO5B)
04131 Membrane trafficking [BR:
lgf04131
]
123588468 (MYO5B)
03029 Mitochondrial biogenesis [BR:
lgf03029
]
123588468 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lgf04812
]
123588468 (MYO5B)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
123588468 (MYO5B)
mRNA cycle factors
P-body specific factors
123588468 (MYO5B)
Membrane trafficking [BR:
lgf04131
]
Others
Actin-binding proteins
Myosins
123588468 (MYO5B)
Mitochondrial biogenesis [BR:
lgf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
123588468 (MYO5B)
Cytoskeleton proteins [BR:
lgf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
123588468 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
123588468
NCBI-ProteinID:
XP_045315452
LinkDB
All DBs
Position
D3:complement(69357611..69697962)
Genome browser
AA seq
1849 aa
AA seq
DB search
MSVSELYGQCTRVWIPDPDEVWRSAELTKDYKEGDTSLQLRLEDETIREYPIDVQSNQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFKELALTCAEDFFYTSQGRDTCIEGVD
DAEDFEKTRQAFTLLGVRESHQISIFKIIASILHLGNVEIQAERDGDSCSISPQDEHLNS
FCRLLGVEHSQMEHWLCHRKLVTTSETYVKTMSLQQVVNARNALAKHIYAQLFGWIVEHI
NKALHTPLKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHSGSQHFQK
PRMSNTAFIVVHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLFHDDKDSVP
ATTASGKGSSSKINIRSARPPLKVSNKEHKKTVGHQFRTSLHLLMETLNATTPHYVRCIK
PNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWAYHDFFNRYRVLVKKRELANT
DKKAICRSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWL
QKVKYRRLKATTLTLQRYCRGLLARRLAEHLRRTRAAIMLQKQYRMRRARLAYQRVHRAT
VTIQAFTRGMFVRRIYQQVLMEHKATILQKHVRGWVARRRFQRLRGAAIVIQCAFRMLKA
KQELKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAVTSTHTMEV
EKLKKELARYQQSQGEDGSLRLQEEVESLRAELQRAHSERKILEDAHTKEKDELRKRVAD
LEEENALLKDEKEQLNNQILCQAKDESAQNSAKENLMKRELEEERSRYQNLVKEYSRLEQ
RYDNLRDEMTIIKQTPGHRRNPSNQSSLESDSNYPSISTSEVGDTEDALQQVEDIGLEKA
AMDMTVFLKLQKRVRELEQERKKLQAQLEKREQQDSRKVQVEQAKNDLDLDQDADLAYNS
LKRQELESENKKLKNDLNELRKAVADQATQNNSSHSSPDSYSLLLNQLKLANEELEVRKE
EVLILRTQIVSADQRRLAGKSTEPNINARTSWPNSEKHVDQEDAIEAYHGVCQTNSKTED
WGYLNEDGELGLAYQGLKQVARLLEAQLQAQSRKHEEEVEGLRAQVEALKEELDKQQQTF
CQTLLLSPEAQVEFGVQQEISRLTNENLDLKELVEKLEKNERKLKKQLKIYMKKVQDLEA
AQALAQSERRRHELNRQVTVQRKEKDFQGMLEYHKEDEALLIRNLVTDLKPQALAGTVPC
LPAYILYMCIRHADYVNDDLKVHSLLTSTINGIKKVLKKHNDDFEMTSFWLSNTCRLLHC
LKQYSGDEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGVLQPMIVS
AMLENESIQGLSGVKPTGYRKRSSSMVDGDNSYCLEAVIRQMNSFHTVMCDQGLDPEIIL
QVFKQLFYMINAVTLNNLLLRKDVCSWSTGMQLRYNISQLEEWLRGRNLHQSGAVQTMEP
LIQAAQLLQLKKKTPEDAEAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVAFIRTIQA
QLQERNDPQQLLLDFKHMFPVLFPFNPSSLTMDSIHIPAYLNLEFLNEV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcagcgagctctacggccagtgcacgagggtctggatccctgaccctgatgaa
gtgtggcgctcagctgagttaaccaaggactacaaggagggagacacgagcctccagctc
agactggaagatgaaacgattcgggaataccctattgatgtccaaagcaaccagctaccc
tttttgcggaatccagatatcttggtgggagaaaatgacttaactgcccttagctatcta
catgagcctgcagttttgcataatttaaaggtccgtttcctggagtcgaaccacatctac
acttactgtggtattgtgcttgttgccattaatccttatgaacagttgccaatctatggt
caagatgtcatctatgcctatagtggccaaaacatgggggacatggacccccacatcttt
gctgtggcagaagaagcctacaagcagatggccagagatgagaagaaccagtccatcata
gtcagcggggagtctggagccggcaagactgtgtcagccaagtatgccatgcgctatttt
gccacggttggtggctcagccagtgacaccaacattgaagagaaggttctggcatccagt
cccatcatggaggccattggaaatgctaaaaccactcgcaatgacaacagcagccgtttt
gggaagtacattcagattggctttgataaaaggtaccacatcattggggccaacatgagg
acctacctgttggagaagtccagagtggtctttcaggcagatgacgagcggaattaccac
atcttttaccagctctgtgctgccgccagtctcccggaatttaaggagcttgcactgaca
tgcgcggaggacttcttctatacctcacagggaagagacacgtgtatcgagggtgtcgat
gatgccgaggactttgagaagacgcggcaagccttcacactccttggagtgagagagtcc
catcagataagcatttttaagataattgcttctatcctgcaccttggaaatgtggagatt
caggctgagcgtgatggtgattcctgtagtatatcacctcaggatgaacacttgaacagc
ttctgccgactgctaggggtggagcacagtcagatggagcactggctatgccatcgaaag
ctggtcaccacctcagagacctacgtcaagactatgtccctgcagcaggtggtcaatgcc
cgcaacgccctagccaagcacatctatgcccagctgttcggctggattgtggagcacatc
aacaaggccctgcacacgcctctcaagcaacactccttcattggcgtcctggacatctat
gggtttgagacatttgaagtgaacagctttgagcagttctgtatcaactatgcgaatgag
aagctacagcagcagttcaactcgcatgtgttcaaactagagcaagaagaatatatgaag
gagcagataccttggaccttgattgatttttatgataaccaaccttgtattgacctcata
gaagctaaactgggcatcttggacctgttggatgaagagtgtaaggtccctaaaggaact
gaccagaactgggcacagaagctctatgaccgtcactctggcagccagcacttccagaaa
ccccgcatgtccaacacagccttcattgtggtccactttgctgataaggtggagtacctt
tcagatggttttctggagaaaaacagagacacggtgtatgaagagcagatcaacatcctg
aaggccagcaagttcccactagtggctgatttgtttcatgatgacaaagactctgttcct
gccaccactgcatctgggaagggctcatcctcaaagatcaacattcgctctgccagaccc
cctctgaaagtctccaacaaggaacacaagaaaaccgtgggccaccagttccgtacctcc
ctgcatctgctcatggagaccctgaatgccacgaccccacactacgtgcgctgcatcaag
ccaaatgacgagaagctccccttccactttgacccaaagagagcagtgcagcagctcaga
gcctgtggggtgttggagacgatccgaatcagtgcagccggctacccatccaggtgggcc
taccacgacttcttcaaccggtatcgggtgctggtcaagaagagagagctcgccaacaca
gacaaaaaggccatctgcagatctgtcctggaaagcctcatcaaggatcccgacaagttc
cagtttggccgcaccaagatctttttccgggcaggccaggtggcttacctggagaagctt
cgggctgacaagttccgggcagccacgatcatgatccagaaaactgtccggggctggctg
cagaaggtgaaataccgcaggctgaaggccactaccttaactctgcagcggtattgccga
gggctcctggcccgcaggctggccgagcacctgcggaggacgcgagcagccatcatgctc
cagaagcagtaccgcatgcggagggcccgcctggcctaccagagggtccacagggccacc
gtcaccatccaggccttcactcggggcatgttcgtgcggagaatctaccagcaggtcctc
atggagcacaaggccaccatcctccagaagcacgtgcggggctgggtggcacgtaggcgc
tttcagcggctacggggcgcggccattgtcatccagtgtgccttccgcatgcttaaggcc
aagcaggagctgaaggccctcaagatcgaggcccgctcagcagagcacctgaaacgtctc
aacgtgggcatggagaacaaggtggtccagctgcagcggaagattgatgaccagaacaaa
gagttcaagactctgtcagagcagttgtcggcggtcacctccacacacaccatggaggta
gagaagttgaagaaggagctggcccgctaccagcagagccaaggtgaggacggcagcctg
aggctgcaggaggaggtggagagcctgcgggcggagctgcagagggcccactcggagcgc
aagatcctggaggacgcccacaccaaggagaaggacgagctgagaaagcgcgttgcagac
ctggaggaagaaaatgctctcttaaaagatgagaaagaacagcttaacaaccaaatcctg
tgccaagcgaaagacgaatctgcccaaaactctgccaaggaaaatctgatgaagagggag
ctggaggaggagcgctcccggtaccagaacctcgtgaaggaatattcacggttggagcag
agatacgacaaccttcgggatgagatgaccatcatcaagcaaaccccagggcacaggagg
aacccatcaaaccagagcagtttagaatctgactctaattacccctccatctccacatct
gaggttggagacacagaggatgccctccaacaggtggaggacatcggcctggaaaaggca
gccatggacatgaccgtcttcctgaaactgcagaagagagtgcgcgagctggagcaggag
aggaagaaactgcaggcacagctggagaagagggagcagcaggacagccggaaggtccag
gtggaacaagcaaagaatgacctggatttggaccaggatgcagatctagcctacaacagt
ctgaagaggcaagagctagagtcggagaacaagaagctgaagaatgacctgaacgagctg
aggaaagccgtggctgaccaagccacacagaacaactccagccacagctcccccgacagc
tacagcctgctgctgaaccagctcaagctggccaacgaggagcttgaggttcgcaaggag
gaggtgctcatcctgaggactcagattgtcagcgccgaccagcgccgactcgccggcaag
agcacggagccgaacattaatgccagaacaagttggcctaacagtgagaagcatgtagat
caggaagatgccatcgaggcctatcatggggtctgccagacaaacagcaagactgaggat
tggggatatttgaatgaagatggagagctcggcttggcctaccaaggcctaaagcaagtt
gccaggttgctggaggcccagctgcaggcccagagccgcaagcatgaggaggaggtggag
gggctccgggcccaggtggaagccctgaaggaggaactggacaagcagcagcagaccttc
tgccagacgctgctgctctccccagaggcccaggtggaatttggcgtccagcaggagata
tcccggctcaccaatgagaacctggaccttaaagaactggtagaaaagctggaaaagaat
gagaggaagctcaagaagcagctgaagatttacatgaagaaagtccaggacctagaagct
gcccaggcactggcccagagtgagaggagacgccatgaactcaacaggcaggtcactgtg
cagcggaaggagaaggacttccagggcatgctggagtaccacaaggaagatgaggccctt
ctcattcggaacctggtgacagacctgaagccgcaggcgctggcgggcactgtgccctgt
cttcctgcctacattctctacatgtgcatcaggcatgcagattacgtcaacgacgacctc
aaggtgcactccttgctgacctccaccatcaacggcattaagaaagtcctgaagaagcac
aatgatgacttcgagatgacatcattctggttatccaatacctgccgcctccttcattgt
ttgaagcagtatagcggggatgagggcttcatgactcagaatactgccaagcagaatgag
cactgtcttaagaactttgacctcactgaataccgccaggtgctgagtgacctttccatt
caaatctaccagcaactgattaaaatcgccgagggtgtgttgcagcctatgatagtttct
gccatgttggaaaatgagagcattcagggtctatcaggtgtgaagccaacaggctaccgc
aagcgctcctccagcatggtggacggggacaactcctactgcctggaagccgtcatccgc
cagatgaattcctttcacacagtcatgtgtgaccagggcctggacccggagatcatcctg
caggtgttcaagcagctcttctacatgatcaacgctgtgactctcaacaacctgctcctg
cggaaggacgtctgctcttggagcacaggcatgcagctcaggtacaatataagtcaactt
gaagagtggcttcggggaagaaaccttcaccagagcggagcagtccagaccatggaacct
ctgatccaagcagcccagctcctacagttaaagaagaaaacccctgaggacgcagaggcc
atctgctcgctgtgcacctccctcagcacccagcagattgtcaaaattttaaacctttat
actcccctcaatgaatttgaagaacgggtaaccgtggcctttatacgaacaatccaggca
caactacaagagcggaatgaccctcagcaactgctgttagacttcaagcacatgtttcca
gtgttgtttccatttaacccatcctctctgaccatggactccatccacatcccagcatat
ctcaatctggagttcctcaatgaggtctga
DBGET
integrated database retrieval system
