Leopardus geoffroyi (Geoffroy's cat): 123588713
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Entry
123588713 CDS
T10761
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04010
MAPK signaling pathway
lgf04020
Calcium signaling pathway
lgf04713
Circadian entrainment
lgf04925
Aldosterone synthesis and secretion
lgf04927
Cortisol synthesis and secretion
lgf04929
GnRH secretion
lgf04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
123588713 (CACNA1H)
04020 Calcium signaling pathway
123588713 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
123588713 (CACNA1H)
04925 Aldosterone synthesis and secretion
123588713 (CACNA1H)
04927 Cortisol synthesis and secretion
123588713 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
123588713 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
123588713 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123588713 (CACNA1H)
Ion channels [BR:
lgf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
123588713 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
123588713
NCBI-ProteinID:
XP_045315804
LinkDB
All DBs
Position
E3:complement(40961296..41023278)
Genome browser
AA seq
2383 aa
AA seq
DB search
MPATAAVPAAPPFPRRARGVVPGSRSPPVTPQVLPVATMTEGAQAADEVRVPLGAPAAGS
AVAAGASPASPGAPGREAEPGSGAGASPPESPAAERGAELGADEEQPVPYPALAATVFFC
LGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGMFRPCEDVECRSERCSILEAFDDF
IFAFFAVEMIIKMVALGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVR
VLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFL
DSTFARNNNLTFLRPYYQTEEGEENPFICSSRRDNGMQKCSHIPSRRELRVECTLGWEAY
GQPQAEGVAGAGRNACINWNQYYNVCRSGGSNPHNGAINFDNIGYAWIAIFQVITLEGWV
DIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMREQRARYL
SNDSTLASFSEPGSCYEELLKYVGHVCRKVKRRGLRLYARWQSRWRKKVDPGGALHGQGP
GRRPRRAGRHAASVHHLVYHHHHHHHHHYHFSHGSPRRPGPEDTRLVRAGALPSPPSPGR
GPPDAESVHSVYHADCHVEGPQERARVAHTAAAAAAGLKLATGLGAMNYPTILPSSVGGN
RGGTGLGPKGKRAGGPPGAGEHSPLSLRGPDPYEKIQHLVGEHGLGRAPSRLSGLSVPCP
LPSPQAGTLTCELKSCPYCASAPEDPDFELSDSESGGSEGNGVYEFTQDVRHGDRRDPMR
PPAAADAPGQGSARQRARRRAAPGEQGGPGRIWAAFGGKLRRIVDSKYFNRGIMVAILTN
TLSMGVEYHEQPDELTNALEISNIVFTSVFALEMLLKLLACGPLGYIRNPYNIFDGIIVV
ISVWEIVGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFI
FIFSILGMHLFGCKFSLTTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMAS
TSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSAHLEEDFDKFP
DARATEVKMYPLAVTPNGHLEGRGSLPPPLIMRTAATPMPTPKSSPHLDPAPGLLESRRG
SSSSVDPQLGDQKSLSSLRSSPCAHWGPNSAWSSRRSSWNSLGRAPSLKRRSQCGERESL
LSGEGKGSTDEEAEDGRPGAGASLGTRTIPLRRAESLDQRSTLDLRPPRPAALLPSKFHD
CNGQVLALPSEFFLRIDSHKEDSAEYDDDVENSCCVRLRKVLEPYKPAWCRSREPWALYL
FSPQNRFRVSCQKIIAHKMFDHVVLVFIFLNCITIALERPDIDPSSTERVFLSVSNYIFT
AIFVAEMMVKVVALGLVSGDHAYLQSSWNVLDGLLVLVSLVDIVVAMASAGGAKILGILR
VLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKF
YYCEGADTRNISTKAECRAARYRWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDA
VGIDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEK
RQRRLERKRRSTFPSPEAQRRPYYADYSPTRRSIHSLCTSHYLDLFITFIIGVNVITMSM
EHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGI
TLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLF
MLLFFIYAALGVELFGRLECSDDNPCEGLSRHATFSNFGMAFLTLFRVSTGDNWNGIMKD
TLRECAREDKHCLTYLPAISPIYFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAEL
DAELELEVARGPPARPRPAAPQSPDAPGLLVVRKVSVSRMLSLPNDSYMFRPVAPASAPH
PRPLPETDAETSGPAPGLSTSAHSLPAEPCTPLRVSSAAPSPARDTDALGALSPRGATRS
PSLSRLLRRQEAVRTSSLEGQMAGPRDGGPGWAEPGGKTPVRQASLGASVRSPPRSPRPA
SVRARKHTFGQRCVSGRPPAPGGEEAEAPDPADEEVSHITSSAQSPSASPDAPGAGGEPD
LHGFCGVDAQGFRGQPGQADEQRRPSAEQGGGDGRSEVREVKARVPEAEPPSGARRKKKM
SPPCISVDPPAEDEGTARPPAAEGSGTLRRRTPSCEATPHRDSLEPVEGAGADAAAKGER
RAQAACRADHLTVPSFAFEPLDVGGPGGDLFADSGHSVAPEPRASLSGATVPPEPHKTEP
PVLSSDPPEKGRGLHLKVLQSPPKKAGSPPATPIPGDHIDKPV
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgaccgcggctgttcccgcagctccgccgtttcccaggcgggcgaggggtgtc
gttcccgggtcgcggtcaccgcctgtcaccccgcaggtgctgcccgttgccaccatgacc
gagggcgcgcaggcggccgacgaggtccgagtgcccctgggcgctccggccgcgggctcg
gcggtggcggcaggggcgtccccggcgagccccggggcgccggggcgggaggcggagccg
gggtccggggccggcgcgtcgccccccgagagcccggcggccgagcgcggcgcggagctg
ggcgccgacgaggagcagcccgtcccgtacccggcgctggcggccaccgtcttcttctgc
ctcgggcagaccacgcggccgcgcagctggtgtctccggctggtttgtaacccgtggttc
gagcacgtcagcatgctggtcatcatgctcaactgcgtgaccctgggaatgttccggccc
tgcgaggacgtcgagtgccggtcggagcgctgcagcatcctggaggccttcgacgacttc
atcttcgccttctttgccgtggagatgatcatcaagatggtcgccctggggctgttcggg
cagaagtgctacctgggcgacacgtggaacaggctggatttcttcatcgtcatggcgggc
atgatggagtactccctggacggacacaacgtgagcctctccgccatccggacggtgcgt
gtgttgcggcccctccgcgccatcaaccgtgtgcccagcatgcggatcctggtcacgctg
ctgctggacacgctgcccatgctcgggaacgtccttctgctctgtttctttgtcttcttc
atcttcggcatcgtgggcgtacagctctgggctggtctgcttcgcaaccgctgcttcctg
gacagcacctttgccaggaacaacaacctcaccttcctgcggccgtactaccagacagag
gagggcgaggagaatccctttatatgctcctcgcgccgggacaacggcatgcagaagtgc
tcgcacatccccagccgccgtgagctgcgcgtggagtgcacgctgggctgggaggcctac
gggcagccgcaggccgagggcgtggctggcgcgggccgcaacgcctgcatcaactggaac
cagtactacaacgtgtgccgctcgggcggctccaacccccacaacggcgccatcaacttc
gacaacatcggctacgcctggatcgccattttccaggtgatcacgctggagggctgggtg
gacatcatgtactacgtcatggacgcccactctttctacaacttcatctacttcattttg
ctcatcatcgtgggctccttcttcatgatcaacctgtgcctggtggtgatcgccacgcag
ttctcggagaccaagcagcgggagaaccagctgatgcgggagcagcgcgcacgctacctg
tccaacgacagcacgctggccagcttctcggagcccggcagctgctacgaggagctgctc
aagtacgtgggccacgtctgccgcaaggtcaagaggcgcggcctgcgcctgtacgcccgc
tggcagagccgttggcgcaagaaggtggaccccggcggcgccctgcacggccagggtccc
gggcgccggccgcggcgcgcgggcaggcacgcggcctccgtccaccacctggtctaccac
caccaccaccaccaccaccaccactaccatttcagccacggcagcccgcgccggcccggc
cccgaggacaccaggctggtgcgggccggagcgctgccgtcgccgccctcgccgggccgc
gggccccccgatgccgagtcagtgcacagcgtgtaccacgcggactgccacgtggagggg
ccgcaggagagggcccgggtggcacacaccgcggccgcggccgccgccggcctcaagctg
gccacggggctgggggccatgaactaccccaccatcctgccctcgtcggtgggcggcaac
agaggcggcaccggcctcgggcccaaggggaagcgggccggcgggcctccgggcgccgga
gagcacagccccctgagcctgaggggccctgatccctatgagaagatccagcatctggtc
ggggagcacggactgggccgggcccccagccgcctgtcgggcctgagcgtgccctgtccc
ctgcccagccctcaggcgggcacgctgacctgcgaactgaagagctgcccgtactgtgcc
agcgcgccagaggaccctgactttgagctcagtgactccgagagcgggggctcggaaggc
aacggggtctatgagttcactcaggacgtgcggcacggggaccgccgtgaccccatgcgg
ccccccgcggcggcggacgcgccaggccagggcagcgcacggcagcgggcacggcggcgg
gcggccccgggcgagcagggcgggccgggccgcatctgggccgccttcggtggcaaactg
cgccggatcgtggacagcaagtacttcaaccgcggcatcatggtggccatcctcaccaac
acgctgagcatgggcgtcgagtaccacgagcagcctgacgagctgaccaacgccctggag
atcagcaacatcgtgttcaccagtgtgttcgccctggagatgctgctgaagctgctggcc
tgcggcccgctgggctacatccggaacccctacaacatcttcgacggcatcatcgtggtc
atcagcgtctgggagatcgtcgggcaggcggacggcggcctgtcggtgctgcgaaccttc
cggctgctgcgggtgctcaagctggtgcgcttcatgcccgcgctgcggcgccagctggtg
gtgctcatgaagaccatggacaacgtggccaccttctgcatgttgctcatgctcttcatc
ttcatcttcagcatcctgggcatgcacctctttgggtgcaagttcagcctgacaacagac
accggagacacggtccccgacaggaagaactttgactccctgctgtgggccatcgtcacc
gtgttccagatcctcacgcaggaggactggaacgttgtcctctacaacggcatggcctcc
acctcctcctgggcggccctctacttcgtggcactgatgaccttcggcaactacgtactc
ttcaacctcctggtggccatcctggtggagggctttcaggcagagggtgacgccaacaga
tccgacacggacgaggacaagacatccgcccacttggaggaggactttgacaagttccca
gacgcccgggccacggaggtgaagatgtacccgctggcagtgacccccaacgggcacctg
gagggccgaggcagcctgccccctcccctcatcatgcgcacagcggccacgcccatgccc
acccccaagagctccccacacctggacccggcccccggcctcctggagtcgaggcgcggc
agcagcagctctgtggacccccagctgggcgaccagaagtcactgtccagcctccgaagc
tcgccctgcgcccactggggccccaacagtgcctggagcagccggcgctcgagctggaac
agcctgggccgcgcacccagcctcaagcgccggagccagtgcggggagcgggagtcgctg
ctgtccggggagggcaaggggagcacggacgaggaggcggaggacggcaggccgggggcg
ggggcctcgctggggacgcgtaccatcccgctgcgccgtgccgagtccctggaccagcgc
agcacgctggacctgcggcccccgcggccagccgcactgctgcccagcaagttccacgac
tgcaacgggcaggtgctcgccctgcccagtgagttctttctgcgcatcgacagccacaag
gaggactcggccgagtatgacgacgacgtggagaacagctgctgcgtgcgcctgcgcaaa
gtgctggagccctacaagcccgcgtggtgtcggagccgggagccctgggccctgtacctc
ttctccccgcagaacaggttccgggtctcctgccagaagatcatcgctcacaagatgttc
gatcacgtcgtcctggtgttcatcttcctcaactgcatcaccatcgccctggaaaggcct
gacatcgaccccagcagcaccgagcgtgtcttcctcagcgtctccaactacatcttcacg
gcgatttttgtggctgagatgatggtgaaggtggtggccctgggcctggtctccggcgat
cacgcctacctgcagagcagctggaacgtgctggacgggctgttggtcctggtgtccctg
gtcgacatcgtggtagccatggcctccgccggtggcgccaagatcctgggcatcctgcga
gtgctgcgcctgctaaggacgctgcggcctctgagggtcatcagccgtgctccaggtctc
aagctggtggtggagactctgatatcgtcactcaggcccatcgggaacatcgtcctcatc
tgctgtgccttcttcatcatcttcggcatcctgggggtgcagctcttcaaggggaagttt
tattactgcgaaggcgccgataccaggaacatctccaccaaggccgagtgccgggcggcg
cgctaccgctgggtgcggcgaaagtacaacttcgacaacctcggccaggcgctgatgtcc
ctgttcgtgctctcctccaaggacggctgggtgaacattatgtatgacgggctggacgcc
gtgggcatagatcagcagccggtgcccaaccacaacccgtggatgctgctctatttcatc
tccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggcgtcgtggtggag
aacttccacaagtgccggcagcaccaggaggccgaggaggcgcggcggcgcgaggagaag
cggcagcggcgcctggagaggaaacgcaggagcaccttccccagcccagaggcccagcgc
cggccctactatgcggactactcgcccacccgccggtccatccactcgctgtgcaccagc
cactatcttgacctcttcatcaccttcatcatcggggtcaacgtcatcaccatgtccatg
gaacactacaaccagcccaagtcgctggacgaggccctgaagtactgcaactacgtgttc
accatcgtctttgtctttgaggccgtgctgaagctggtggcttttgggttccggaggttc
ttcaaggacaggtggaaccagctggacctggccatagtgctgctgtccatcatgggcatc
acgctggaggagatcgagatgaacgcggccctgcccatcaaccccaccatcatccgcatc
atgcgcgtgctccgcatcgcccgcgtgctgaaactgctcaagatggccacaggcatgcgg
gccctgctggacacggtggttcaagccctgccccaggtagggaacctcggcctacttttc
atgctcctgttttttatctatgctgccctgggggtggagctgtttgggaggctcgagtgc
agtgacgacaacccctgcgagggcctgagccggcatgccaccttctccaacttcggcatg
gctttcctcacgctgttccgcgtgtccacgggggacaactggaacgggatcatgaaggac
acgctgcgggagtgcgcccgcgaggacaagcactgcctcacgtacctgccagccatctcc
cccatctacttcgtcaccttcgtgctggtggcacagttcgtgctggtcaacgtggtggtg
gccgtgctcatgaagcacttggaggagagcaacaaggaggcccgcgaggacgccgagctg
gacgccgagctggagctggaggtggcgcgaggcccccccgcccgccccaggcccgcggcc
ccgcagagcccggacgcccccggcctcctggtcgtgcgcaaggtgtctgtgtcccggatg
ctgtccctgcccaacgacagctacatgttccggcccgtggcgcccgcctccgccccacac
cctcggccgctgcctgaaacggatgcggaaacctcgggtcctgccccgggtctgtccacc
tctgcacactccctgcccgcagagccctgcacccccctccgggtctcttcggccgcacca
tccccagcccgggacaccgacgccctcggtgccctgtcccctcggggcgcaacccgctcc
cctagcctcagccgactgctccgcagacaggaggccgtgcgcaccagctccctggaaggg
cagatggccggccccagggatggtggcccaggctgggcggagcctggcgggaagaccccc
gtgaggcaggcgtccctgggggcctccgtacggtccccaccccgttccccgaggcccgcc
agcgtccgcgcccgcaagcacacttttgggcagcgctgcgtctccggtaggccgccggcc
ccaggaggggaggaggccgaggccccggaccctgctgacgaggaggtcagccacatcacc
agctcggcgcagagcccctcggcctcccctgatgccccgggagcaggcggtgagccagac
ctgcacggcttctgcggcgtcgacgcccagggcttccgggggcagccgggccaggcggat
gagcagaggcggccctcggcggagcagggaggaggggacggccgctcggaggtccgggag
gtgaaggcccgggtcccggaggcggagcccccctcgggggcccgcaggaagaagaagatg
agccccccctgcatctccgtagacccccccgcagaggacgagggcaccgcgcggcccccg
gcggcagagggcagcggcactctgagacggcgaaccccgtcctgtgaggccacgccacac
agggactccctggagcccgtggagggggcgggggcggacgcggccgccaagggggagcgt
cgcgcacaggcggcctgccgcgcagaccacctgaccgtccccagcttcgcctttgagccg
ctggacgtggggggccctggcggagacctgtttgcagacagcggccacagcgtggcccct
gaacccagagcttccctttcgggggccacagtgcctcctgaaccccacaaaacagagcct
cccgtgctctccagcgaccccccagagaagggacgggggctgcacctcaaagtcctccag
agccccccaaagaaagcggggtcccccccggccacccccatcccgggtgaccacatagac
aagcccgtgtag
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