Leopardus geoffroyi (Geoffroy's cat): 123588892
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Entry
123588892 CDS
T10761
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50 isoform X1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgf04121
]
123588892 (TRIM50)
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123588892 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
U-box
Prok-RING_4
zf-Nse
Baculo_IE-1
zf_RING_Vps8_fungal
TRIM_CC
Sina_RING
zf-RING_4
zf-ANAPC11
zf-RING_6
Trimer_CC
DUF1644
Relaxase_C
COG2_N
CcmH
DUF7575
SSNA1
Motif
Other DBs
NCBI-GeneID:
123588892
NCBI-ProteinID:
XP_045316209
LinkDB
All DBs
Position
E3:complement(9764003..9811018)
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AA seq
487 aa
AA seq
DB search
MAWQVSVPELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVNLSHHLDSELRCPVCRQEV
DSSSSPPNVSLARVIEALQLPGDPEPKVCQHHRNPLSLFCERDQELICGLCGLLGSHQHH
RVTPVSTVYSRMKEELAALISDLKQEQKKVDEHIAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGLEGHTRGLVASLDMQLEQAKGTQERLGQAERVLEQFSNESHYEF
IRKYHSTASRAELQQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDP
ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD
WRLGVIKGTASRKGRLSKSPENGVWLIGLKEGRVYEAFGCPRVPLPVAGHPHRIGVYLHY
ERGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHEKGGNALPLVLPPPSGPAHLT
PTQPTKL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcaggtgagcgtgcccgagctggaggaccgccttcagtgccccatctgcctg
gaggtcttcaaggagcccatgatgctgcagtgcggccactcctactgcaagggctgcctg
gtgaacctgtcccaccacctggactcggagctccgctgcccagtgtgccggcaggaggtg
gatagcagcagctccccgcccaacgtctctctggcgagggtgattgaagctctacagctc
cccggggacccggagcccaaggtctgccagcaccaccggaacccgctcagcctcttctgt
gagagggaccaggagctcatctgtggcctctgcggcctgctgggctcccaccagcaccac
cgcgtcacgcctgtctccaccgtctacagccgcatgaaggaggagctagcggctctcatc
tctgacctgaagcaggagcagaagaaggtggatgagcatattgccaagctggtgaacaac
aggacccggattgtcaatgaatctgacgtcttcagctgggtgatccgtcgcgagttccag
gagctgcaccacctggtggatgaggagaaggcccgttgcctggaggggttggagggtcat
acccgtggccttgtggcctccctggacatgcagctggagcaggccaagggcactcaggag
cggctgggccaggctgaacgtgtgctcgagcagttcagtaatgagagtcactatgagttc
atccggaagtatcactccacggcctccagagcagagctccagcaggcccggcctctagaa
ggcgccttcagccccatctccttcaagccgggcctccaccaggctgacatcaagctgact
gtgtggaaaaggctcttccgaaaagttctgccggccccggagtccctcaagctggacccc
gccaccgcccacccactcctggaactctccaagggcaacacggtggtgcagtgtgggctc
ctggcccagcggcgagccagccagccagagcgctttgactacagtacttgtgtcctggcc
agccggggcttctcctgcggccgtcactactgggaggtggtggtaggcagcaagagcgac
tggcgcctgggggtcatcaaaggcacggccagtcgcaagggcaggctgagcaagtccccg
gagaatggcgtgtggctcatcggcctgaaggagggccgggtgtacgaggccttcggctgc
cctcgggtgcccctgcctgtggctggccacccccaccgcatcggcgtctacttgcactat
gagcgtggcgagctcaccttctttgatgctgaccggcccgatgacctgcggccgctctac
acgttccaggctgacttccagggcaagctctaccccatcctggacacatgctggcacgag
aagggcggcaacgcgctgcctctggtgctgcccccgcccagcgggcctgcccacctcacc
cccacgcagcccaccaagctgtag
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integrated database retrieval system
