Leopardus geoffroyi (Geoffroy's cat): 123588897
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Entry
123588897 CDS
T10761
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123588897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123588897
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
123588897
SWR1 complex
123588897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
123588897
NCBI-ProteinID:
XP_045316226
LinkDB
All DBs
Position
E3:complement(18231702..18267561)
Genome browser
AA seq
3238 aa
AA seq
DB search
MQSSPSPAHPQLPVLQTQMVLDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP
PGPPDGATVPLEGLSLPQAADLANKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPLASSKAGSSPCLGSSSAASSPPPPVSRLDDEDGDFQPQEEEEEDDE
ETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGGPSSPSRTPSSRDSD
TRDGPEEGGEEEEPSQVLKVKPSPSVTQRNKQPWHPDEDDEEFTANEDEAEDEEDTIAAE
EQLEGEVDHAMELSELAREGELSMEELLQQYAGAYASDASAPGSGSSEEEDEDEVEANSS
DCEPEGATEAEEVPQEDSSSQSESAEEQSEEEEDEHSEEEETSGSSESEESESEESEESR
SQSQADEEEEEDDDFGVEYLLARDEEQSEADGGSGPPTPGPATTLGPKKEITDIAAAAES
LQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQT
ISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWT
KPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLL
TGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVL
RPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINI
LMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDLIGLEG
RVSRYEADTFLPRHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVVVVN
SPRTPLGPVPVRPPPGPELSTQPPPGPTPPVLPAPLMVSASPVGPPLIPTSRPPGPVVLP
PLQPNSAPLPQVLPSPLGVLSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSSLLKPLTV
PPGYTFPSAATTTSTAAAAAPTTAVPTTTPAPQRLILSPDMQARLPSGEVVSIGQLASLA
QRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLISQP
AHVALIQAVAPTPGPTPVSVLPSSTPSTTLAPTGLSLPLAANQVPPTMVNNTGVVKIVVR
QAPRDGLTPVPPLAPAPRPPSSGLPAVLTPRPTLTPGRLPTPTLGTARAPIPTSTLVRPL
LKLVHSPSPEVSASAPGAAPLTISSPLPVQSPLPGPASPMPVPNSSPLASPVSSTVSIPV
SSSLPISVSTTPPAPASAPLTIPISASLPVSASGPALLTNVTPTLAPVVSATPGPPSLAP
AGASPSASALTLGLATTPSLSSSQATGHPLLLAPASSHVPGLNSAMAPACSPVLVPASAL
ASPFPAAPNPAPAQASLLAPAPSASQALATSLAPMVAPQTAILAPSPAPSLAPLPVLAPS
PGPAPVLAPSQTPVPVLASSSTPGTPLASASSLVPAPAPVLAPSSTQTMVPAPVPSPLPS
PASTQTLALAPTLASTLGGSSPSQTLSLGMGNPQGPFPAQTLSLTPASSLVPTPAQTLSL
APGPPLGPSQTLSLAPPLTPVSPVGPAPAHTLTLAPVSSSASLLTPASVQTLTLSPAPVP
VPTLGPAAAQTLALAPVSTQAPASQASSLVVSASGAAPLPVTMVSRLPVPKDEPETLTLR
PGPPSPPSTATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGAL
APVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAARQAVLFPQQRLDQLSEIIE
RFIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLACELWPRARPLHRIVCNMRTQFPD
LRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTR
VEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHR
IGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPL
EEPPGSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNEN
DGFPAGDGEEAGRPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQ
AEEQVEAARKDLDQAKEEVFRLPQEEEEGPGAGDEVSCGAGGGSHRRSKKAKAPERPGTR
VSERLRGARAETQGANHTPVTSTHHTRSTSTPPRCSPARERVPRPAPRPRPTPASAPAVI
PAPIPVPIPAPIPISAPNPVTMLPVHILPSPPLPSSQIPPSCSSACTPPPACTPPPAHTP
PPAQTSLSTPSSPLLLGLPSVPVSPPVTNLPLGLGPETELCAQALASTESPELADMASSE
TSPLTLVPPKDLLPVAVEILPMSEKNLSLASSAPSPTLEADSVPNGQEQEVPEPAEGTIL
TVLPDGEEVPSCLSESNGLELPPSAASDELLQEPLEADKSSEELVEAQTPTSSPEKPQEL
VPAEVAAPSTSSSATSSPESPSPARPPRRRTSADVEIRGQGAGRPGQPPGPKVLRKLPGR
LVTVVEEKELVRRRRQQRGTASTLVPGVSETGTSPGSPSARSMSGPESSPPTGGPCEAAP
PSTLPTPTQQPFIARRRIELGVTGGGSPENGEGALLAITPPAVKRRRGRPPKKNRSPADA
GRGVDEVPSSTSKGKTNGADPVPGAETLIVAEPVLGPQPSPGSQPLGPQPIHRPEPIILS
PVEKRRRGRPPKARDLPIPGTISSPGDGNLESRTQPLPLPPPLPPLPPLLACPTATVANT
VTNLTISTSPPKRKRGRPPKNPPSPRPSQLPVLDRDSSSVLESCGLGRRRQPQGQGESEG
SSSDEDGSRPLTRLARLRLEAEGMRGRKSEGSMVVAVIQDDLDLADSGPGGLELTPPVVS
LAPKLRSTRLRPGSLVPPLETEKVPRKRAGAPVGGGPGLAKRGRLQPPSPLGPEGSVEES
EAEASGEEEEGDGTLRRRPGSRRLGGATNQGDQRILRSSAPSHLAGPTVSHRGRKAKT
NT seq
9717 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcccctcccctgctcaccctcagctcccagtcctgcagacacagatggtg
ttggacggcatgacaggcagcaatcctgtgtcccctgcctcatccagttccccagcctct
agtggggcaggtggcatctctccccagcatatagctcaagattcctctctggatggacct
ccaggacccccagatggtgccacagtgcccttggagggactcagcttaccccaggctgct
gaccttgctaacaaaggcccaaagtgggagaagagccatgctgagattgcagagcaggcc
aagcatgaggctgagattgagactcggattgctgagctgcggaaggagggtttctggtca
ctgaagaggctgcctaaagtgcccgagcctccccgccccaaaggccactgggactatcta
tgtgaggagatgcaatggctctctgctgactttgctcaggagcgtcgttggaaacggggt
gtggcccgtaaggttgtgcgcatggtcatccggcaccacgaggagcagcggcagaaagaa
gagcgggctcggagggaagagcaggccaagctacgccgaatcgcctccaccatggccaag
gacgtcaggcagttctggagcaatgtggagaaggtggtgcaattcaagcaacagtcccgg
ttggaggaaaagcgtaaaaaagctctggacctgcacctggacttcattgtggggcaaact
gaaaagtactcagaccttttgtctcagagcctcaaccagccactagcatccagcaaagct
ggctcttccccttgccttggctcttcctcagctgcctctagtcctccacccccggtttcc
aggctggatgatgaagatggggacttccaaccccaagaggaggaggaagaggatgatgag
gagacgattgaggttgaagaacaacaggaaggcaatgatgcagagacccagaggcgtgag
attgagctgcttcgacgtgagggagaattgccattggaagagctgctccgttcccttccc
cctcagctgctaggagggccttccagcccctcgagaaccccctcatctcgtgacagtgac
actcgagatgggcctgaagaaggtggtgaagaagaagagccctctcaagtgttaaaggtg
aagccctcaccctctgtcacacagcgcaacaaacagccctggcatccagatgaggatgac
gaagagtttactgccaatgaggatgaagcggaggatgaagaggatactatagcagctgag
gagcagttggaaggggaggtggatcatgccatggaactgagcgagttggctcgagaaggt
gagctgtctatggaggagctgctgcagcagtatgcaggagcctatgcttctgatgcctct
gccccaggctctgggagtagtgaagaggaagatgaagatgaggttgaggctaacagctct
gactgtgaaccagagggggctacagaagctgaagaggttcctcaagaggatagtagcagt
caatcagaatctgctgaggagcagagcgaggaagaggaagatgagcattcagaagaggaa
gaaacaagcgggagttcagaatcagaggaatctgagtctgaggaatctgaggagtctcga
tcacagagccaagcagatgaggaagaggaagaagatgatgacttcggggtggagtacttg
cttgcccgggatgaagagcagagcgaggcagatgggggcagtgggcctcccaccccaggg
cctgccactactctaggccctaagaaggaaattactgacatcgctgcagcagctgaaagt
cttcagcccaagggttataccttggccactacgcaggtgaagacccccattcccttgctc
ctgcggggccagctccgagagtaccaacacattgggctggactggctggttactatgtat
gagaagaagcttaatggtattcttgctgatgagatggggctaggcaagacaatccagact
atctccctacttgcccacttggcctgtgaaaaaggtaactggggtccccatttgatcatt
gtccccaccagtgtgatgctgaactgggagatggagctgaaacggtggtgccccagcttt
aaaatcctcacttattatggagcccagaaggagaggaagctcaagcggcagggctggacc
aagcccaatgccttccatgtgtgtatcacgtcttacaagctggtgctgcaggaccaccag
gccttccgccgcaagaactggcgctatctcattctggatgaggctcagaacatcaagaac
ttcaagtcgcagcgttggcagtcattgctcaacttcaacagccagagacgcctactcctc
acaggaactcctttgcagaacagcctcatggagctgtggtctttgatgcactttttgatg
ccccatgtcttccagtctcatcgcgagtttaaagaatggttctctaaccccctaactggc
atgattgagggcagccaagagtacaatgaaggtctagtcaaacgtctccacaaggttttg
cggccttttttgctgcgccgagttaaggtggatgttgagaagcagatgcctaaaaaatat
gagcatgttatccgctgccggctctccaagcgccaacgatgtctctatgatgacttcatg
gcacagaccacaactaaggagacactagccacaggccatttcatgagtgtcatcaacatt
ttgatgcagctgcgaaaagtctgcaatcatccaaacctgtttgaccctcgacctgttacc
tcccccttcatcaccccaggaatctgcttcagcaccgcctctctggtgctaagggccact
gatgtccatcctctccagcggatagacatgggtcggtttgatcttattggcctggagggt
cgtgtctctagatatgaggctgacacatttctaccccggcaccgcctctcccgccgggta
ctgctagaggtggctactgctcctgaccccccaccccggcccaaaccagtcaagatgaag
gtcaacaggatgctgcagccagtgcccaagcaagaaggccggacagtggtggtggtcaat
agcccacggacccccttgggccctgtcccggtccgaccccctccaggccctgagctctcc
acccagcccccacctggcccaacccccccagtgctgccagcaccactgatggtgtcagcc
tcgcctgttgggcccccacttattccgacatcgcggcctcctggccccgttgtgttgcct
ccactgcagccaaacagtgcgcctctgccccaggtgttgccatcccccctgggggtcctg
agtgggacctcaaggcctcctacaccaaccctgtccctaaagccagccccacctgctcct
gttcgcctaagccctgccccacctccaggctcatccagcctgttgaagcctctgacagtg
ccaccgggctacactttcccttctgccgccaccaccacctctaccgccgcagccgctgct
cccaccacggcagtgccgactactactcctgcgccacagcgcctcatcctgtctcctgat
atgcaagctcgcctgccctcaggcgaagtggtcagcatcgggcagttggcctcactggca
cagcgtccagtggctagtgcagggggaagcaaacctctcaccttccagatccagggcaac
aagctgactttgactggtgcgcaggtgcgccagcttgctgtggggcagccccgcccgctg
caaaggaatgtggtgcacctggtgtcagcaggggggcagcaccacctcatcagccagcct
gcccatgtggctctcatccaggccgtggccccgacccctggccccacccctgtctctgtg
ctgccttcttcgacccccagcaccacccttgcccccactggcctcagccttccgcttgct
gctaaccaggtgccaccaaccatggtgaataatacaggcgtggtgaagattgtagtgaga
caggcccctcgggatggactgactcctgttcctccgttggccccagcaccccggcctcca
agctctgggcttccagctgtgttgactccacgccccacgttaacccctggccggctaccc
acacctactctgggtactgcccgagcccccattcccacgtccactctggtgaggcccctt
ctcaagctggtccacagtccttcgcctgaagtcagtgcttcagcacccggagctgctccc
ttgaccatctcttctcctctccccgtgcagtccccactccctgggccagcttctccaatg
ccggttcccaattcctctccccttgctagtcctgtgtcctctacggtctccatcccagtg
tcatcttcacttcccatctctgtctctaccacgcctcctgccccggcctcagctccactc
accatccccatttcggcctccttgcctgtttcggcctctggcccggctctgttgaccaat
gtgactccaacactggcacctgttgtctcagcgactcctggacctccctctttggcacca
gctggggcttccccatcagcgtcagctttgactctgggtttggccacaactccatccctg
tcttcatctcaggcaactggtcaccctctgttgttggctccagcctcttcacatgttcca
gggttgaactcagccatggccccagcatgttcacctgtattggtaccagcttctgctctg
gccagcccttttccggcagcaccaaatccagctccagctcaggcttcccttctggctcca
gcaccttctgcatctcaggctctagccacctctctggctcccatggtggctccacagaca
gcaatcctggctccttctccagctccttcgctggctcctcttccagtcctggccccatcg
ccaggtcctgctcctgtcctggctccatcgcagactccggttccagttctagcttcttca
tctactccaggaactcctttagcttcggcttcttcactggtgccagccccagctcctgtg
ttggctccatcatcaactcagactatggtaccagcccctgttccgtcacctctcccaagc
ccggcttctacacagacactggccttagccccaactttagcatccacccttgggggctca
tctccatctcagaccctctctttgggaatggggaaccctcaggggccttttccagctcag
acattgtcattgactccagcgtcatccctagtaccaactccagcccagacactgtctttg
gcaccaggaccaccactgggtccatctcagacgctgtctctggctccccctttgacgcca
gtttctccagtgggcccagccccagctcacacgctgactttggctccggtatcgtcatct
gcttcactcctaaccccagcttcagtgcaaacattgaccttgagccctgccccagttcca
gtgcccaccttgggtccagctgcagcccagactctggcgctggccccagtctcaacacag
gccccagcttcccaggcatcttcccttgtggtttcggcatctggcgctgctcccttgcct
gtcaccatggtatcccggctgcctgttcccaaggatgagcctgagacactgacgttgcgc
cctggtccccccagccctccttccactgctacctcgttcagtggtccccggcctcgacgc
caacccccgccaccacctcgttcccctttctatctggactctctggaggaaaagcggaag
cggcagcggtctgaacgcctggaacggattttccaacttagtgaggctcatggggccctg
gcacctgtgtatgggactgaagtcctggatttctgtaccctgccccaacctgttgccagc
cccatcggccctcgttctcctggccccagccaccccaccttttggacttataccgaggct
gcccgccaggctgtactgtttccccagcaacgactagaccagctgtcagaaatcattgag
aggttcatctttgtcatgcctcctgtggaggcacctcccccttccctgcatgcctgccac
ccacctccttggctggccccacgtcaggcagccttccaggagcagttggcctgtgagctc
tggccccgggctcgccccttgcaccgtattgtgtgtaacatgcgcacccagttccctgac
ttgaggctcatccagtatgattgtgggaagttgcaaacattggcagtgctgttgcgacag
ctcaaggcagagggccaccgggtgctcatattcacccagatgactcgaatgctggatgta
ttggaacagtttcttacctaccacggccacctctacttgcgtctggatgggtctactaga
gttgaacagagacaggctttgatggaacgattcaacgcagacaaacgcatattctgcttt
atcctttcaactcggagtgggggcgtgggtgtaaaccttacaggagcagacactgttgtt
ttttatgacagcgactggaatcccaccatggatgctcaggcccaggatcgctgtcatcgg
attggccagacccgagatgtccacatctacagactcatcagtgaacggacagtggaggag
aacatcctaaaaaaggcaaatcaaaagagaatgttgggagacatggccattgagggaggc
aacttcaccacagcctattttaaacagcagaccatccgagagctgtttgatatgcccctg
gaagagccacctggctcatctgtaccctctgcccctgaagaggaggaagagactgtggcc
agcaagcagacccatatcctagagcaggcactgtgtcgggcagaggatgaagaggatatc
cgtgcagccacccaggccaaagctgaacaggtggctgagcttgcagaattcaatgagaat
gatggatttcctgctggtgacggagaggaggccggccggcctggggctgaggatgaagag
atgtcccgggctgagcaggaaatcgctgcccttgtagaacagctgacccccattgagcgt
tatgccatgaaattcctggaagcctcactggaggaggtgagccgagaggagctcaagcag
gcagaagagcaagtggaagctgcccgcaaggacctggaccaagccaaggaggaggtgttc
cgcctaccccaagaggaggaggaggggccaggggctggggatgaggtttcctgtggggct
ggtggaggcagtcaccggcgcagtaagaaggccaaggcccctgaaaggccagggactcgc
gtcagtgaacgtcttcgtggagcccgggctgagactcaaggggcaaaccacactcctgtc
acatccacccatcatacccgcagcacttccacacccccacgctgcagccctgccagggag
agagttccccggccagcacctaggcctcgacccactccagcttccgctcctgctgtaatt
cctgccccaatccctgttccaatccctgccccaatccccatttcagccccaaatccagta
accatgcttcctgttcatatcttgccttctcctccacttccctcttcacagattcctccc
tcttgttcttctgcctgtacccctcctcctgcctgtacacctccgccagctcatactcca
cctccagcccaaacctctctctcaactccttcttcccctctcctgcttggtctaccttct
gtgcctgtctcccccccagtcaccaacctccccttgggcttggggcctgagacagaactg
tgtgcacaagcattggcatccaccgagtccccggagctggctgatatggccagttccgag
acttccccacttactcttgtgccccctaaggatctgttgccagttgctgttgagatcctg
cctatgtcagagaagaacctttctctcgcctcttctgcacctagcccaaccctggaggct
gacagcgtccccaacggtcaagagcaggaagtgccagagcctgctgaggggaccatcctc
acagtgctgcctgatggtgaggaggtgccctcctgtctgagtgagagcaatgggctggag
ctcccaccttcagcagcatctgatgagctacttcaggagccattggaggctgacaagagc
tcagaagagctggtggaggcccagaccccaacctccagcccagagaagccacaggaactt
gttccagcagaggtcgcagccccatcaacctcatcttcggccacctcctcacctgagagt
ccttcacctgcccggccccctcggcgtcgcaccagtgctgatgtagaaattaggggtcag
ggggctggtcggccagggcagcctccaggccccaaagtgcttcgcaagctgccgggacgg
ctagtgactgtggtagaggaaaaggaactggtgaggcgacggcgacagcagcggggaact
gccagcaccctagtgcctggggtctctgagactggtaccagcccgggaagcccatctgcc
cgcagcatgtcggggccagaatcctcacctcccaccggtgggccctgtgaagctgctccc
ccatccacactgcccaccccaacccagcaacccttcatagctcgccgtcgcattgagctg
ggggtgactggtgggggcagcccagagaacggagaaggggcacttcttgccatcacccct
cctgctgtgaaacgtcggagggggaggccccccaagaagaacaggtctccagcagatgct
gggcgaggggtggatgaggtaccttcatccacctctaagggaaaaaccaatggggctgac
ccagtccctggggctgagacccttattgttgcggagcctgtcctgggaccccagcctagt
cctgggtcccagcctcttggaccccagccaattcacagacccgagcccatcatcctatca
cctgtggagaaaagaaggcgtgggcgcccccctaaggcacgagatttgcccattcctggg
accatttcctctccaggggatggcaacttagagagccggacacagccactcccgctacca
cctcccctgccaccactcccaccactcctagcctgtcccactgctactgtcgccaacact
gtcaccaatctcaccatttcaacgtccccacccaagcggaaacggggtcgacctcccaag
aatccaccatcacctcggcccagccagctccctgtcttggaccgtgacagctcttctgtc
ctcgagagctgtggattggggaggcggcggcaaccccagggccagggggagagtgagggt
agttcctctgatgaggacggaagccgccccctcacccgcctggcccgcttgcggcttgaa
gcagagggaatgcgggggcgaaagagtgaagggtccatggtggtggctgtaattcaggat
gacctggatttagcagatagtgggccaggcgggttagaattgacacctcctgtggtctcg
ttagctccaaaactgcgctctacccggctgcgtccagggtctctagttcccccactagag
actgagaaggtgcctcgcaaacgggcaggggccccagttggcgggggccctgggctggca
aagcggggccgcctacagcccccgagtcccttgggacctgagggttctgtagaggagtct
gaggctgaagcctcaggcgaggaagaggaaggggacgggaccctacgtcgccggcctggc
tcccgtcgacttggtggggccaccaaccaaggggaccagcgtatcctgcgcagcagtgcc
ccctcccacctggctggccctaccgttagtcacagaggccgcaaggccaagacgtga
DBGET
integrated database retrieval system
