Leopardus geoffroyi (Geoffroy's cat): 123588898
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Entry
123588898 CDS
T10761
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgf04121
]
123588898 (RNF40)
Enzymes [BR:
lgf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123588898 (RNF40)
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
123588898 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
EzrA
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
ZapB
Motif
Other DBs
NCBI-GeneID:
123588898
NCBI-ProteinID:
XP_045316231
LinkDB
All DBs
Position
E3:complement(18198515..18210572)
Genome browser
AA seq
1061 aa
AA seq
DB search
MKFRHIRHCLRRLRSGLKRPVTSGEVQDGARLILLQVTEVPPTPARRPSGDPAPLLVSAA
MSGPGNKRAAGDGGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRHHESQGELSS
GTEAPGTQEGLTRDETPVTEPGTSELREPLPVQPRPPLSEPALAFVVALGASSSEEVELQ
LQGQMEFSKAAVSRVVEASDRLQRRVEELCQRVYSRGDSEPPSEVARARTRELGRENRRL
QDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAEL
QGAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQASGSTHSIPNLGHPEDSGL
SAPTPGKEEGGPGPVNAPDSRKEVASVPGATIAASSAKKEELAPSEEDSQALTPGSQGPS
SRSREPEARPKRELREREGPGLGPPSVASALSRADREKAKVEEAKRKESELLKGLRAELK
KAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRGRIRELEERDRRESKK
IADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLR
EKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQG
SLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREK
ESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVL
TKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgccacatccggcattgcctgcggcgcttgcgctctgggctgaagaggccg
gtgacgtccggtgaagtccaagatggcgctaggctgatcctgctgcaggtgacagaagtg
ccacccacgcctgcccgacgtccctcgggagaccctgcgccgctcctcgtctccgcggcc
atgtctggacccggcaacaaacgcgccgccggcgacgggggctcagggcccccagagaag
aagctgagccgtgaagagaagaccacaaccacgctcatagagcccattcgtcttgggggc
atctcttccacggaggagatggacctgaaggttctgcagttcaagaacaagaaactagca
gagcggttggaacagcgacaggcttgtgaagatgaactccgagaacgaattgagaagctg
gagaagcggcaggccacagacgatgccacacttctcattgtcaatcgctactgggcccag
ctggatgaaaccgtggaagcccttctccgacaccatgagagccagggggagctgtcttca
gggacagaggcgcctgggacccaggagggactgacacgtgatgagacccctgtcacagag
ccagggacatcggagctgagggagcctctgccggtgcagccgcggccccctctcagtgag
ccagccttggcttttgtggtagcactgggcgccagcagcagtgaggaggtggagctccag
ctgcagggccagatggagttctctaaggcagctgtgtcccgggtcgtagaggcctcagac
cgcctacaacgccgggtggaggaactctgtcagcgagtatatagccgaggggacagcgag
ccccccagtgaggtggctcgggcgcgcacccgggagctgggtcgtgagaaccggcgactg
caggacttggccacccagctacaggagaagcaccaccgcatctctttggagtattctgag
ctccaggataaagtgacgtcagcagagaccaaggtgctagagatggagacgacggtggag
gacctgcagtgggacatcgagaagctgcgcaagcgtgagcagaagctcaataagcacctg
gcggaggccttggagcagctcaactctggctactatgtgtctgggagctcctcgggtttc
caggggggccagatcacactcagcatgcagaagtttgagatgctgaatgcagagttggaa
gaaaaccaggaattggccaacagccggatggcagagctggagaagctacaggccgagctt
cagggggctgtgcggaccaatgagcgcctcaaggtagccctgcggagccttcctgaggag
gtggtgcgggaaacgggggagtaccggatgttgcaggcccagttctcactgctctataat
gagtctctgcaagtgaagacccagcttgatgaggcccgggggctgctgctggctaccaag
aattcccacctgagacacattgagcacatggagagcgatgagctggggctacagaagaag
ctgcgcacagaggttatccagctggaggacacgctggcccaggtacgcaaggagtacgag
atgctgcgcatcgagtttgaacagaacctggcggccaacgagcaggcggggcccatcaac
cgtgagatgcgccacctgatcagcagcctccaaaaccacaaccaccagctaaagggggat
gcccagcgatacaagcggaagctgcgggaagtgcaggctgagattggcaagctccgggcc
caggccagtggctcaacccactccattccgaacctgggccacccagaggactctggcctc
agtgccccaaccccagggaaagaagagggtgggccaggccctgtcaatgcccctgacagc
agaaaggaggtggcttcagtgcctggtgccaccattgctgcctcctcagcaaagaaagag
gagctggccccctctgaggaagattcccaggccttaactcctgggtcccagggcccctcc
tcccggagccgagaacctgaggccaggcccaagcgggagcttcgggagcgggaagggcct
ggcctgggacccccatctgtagcctcagctctctcaagagctgatcgggagaaggccaag
gtggaggaggccaagaggaaggagtcagaactccttaaaggtctccgagcagagctcaag
aaggcccaggaaagccagaaggagatgaaactgctgctggacatgtacaagtcagcaccc
aaggaacagcgggataaggtgcagctcatggcagccgaacgcaaggccaaggctgaggtc
gatgaactacgaggccgcattcgggaattggaggagagggaccgaagagagagcaagaaa
attgctgatgaggatgccctgcggcgcattcggcaagccgaagaacagatcgaacacctg
cagcgcaagttgggtgctaccaagcaggaagaagaggctttgctgtcggagatggatgtg
acgggtcaggcttttgaggacatgcaggaacaaaatgggaggctgctacagcagttacgg
gagaaggatgatgccaactttaagttgatgtcagaacggatcaaggccaaccagattcac
aagctactgcgggaggagaaggatgagctgggcgaacaagttcttggcctcaagtcccag
gtggatgcccagctgctgaccgtgcagaagctggaggaaaaagagcgggccttgcagggc
agcctcgggggtgtagagaaggagctgacgctgcgcagccaggccctggagctcaacaaa
aggaaggctgtggaagcagcccagctggccgaggacctaaaggtgcagctggagcacgta
cagacgcggctgcgagagatccagccttgcctggcagagagccgggccgctcgcgagaaa
gagagcttcaacctcaagagggctcaggaggacatctcccgactgcggcgcaagttggag
aagcagaggaaggtggaggtttacgcagatgccgatgaaattctccaggaggagatcaag
gagtacaaggcgcggttgacctgcccctgctgtaacacccgcaagaaggatgcggtcctt
accaagtgcttccacgttttctgcttcgagtgcgtgcggggccgctatgaggcccgccag
aggaagtgccccaagtgcaacgcagcctttggtgcccacgacttccaccgtgtctacatc
agctga
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integrated database retrieval system
