Leopardus geoffroyi (Geoffroy's cat): 123589629
Help
Entry
123589629 CDS
T10761
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04136
Autophagy - other
lgf04140
Autophagy - animal
lgf05010
Alzheimer disease
lgf05014
Amyotrophic lateral sclerosis
lgf05016
Huntington disease
lgf05017
Spinocerebellar ataxia
lgf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123589629 (WIPI2)
04136 Autophagy - other
123589629 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
123589629 (WIPI2)
05014 Amyotrophic lateral sclerosis
123589629 (WIPI2)
05016 Huntington disease
123589629 (WIPI2)
05017 Spinocerebellar ataxia
123589629 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
123589629 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgf04131
]
123589629 (WIPI2)
03029 Mitochondrial biogenesis [BR:
lgf03029
]
123589629 (WIPI2)
Membrane trafficking [BR:
lgf04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
123589629 (WIPI2)
Mitochondrial biogenesis [BR:
lgf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123589629 (WIPI2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
BCAS3_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
DUF7165
WD40_Gbeta
RMC1_N
VID27
Motif
Other DBs
NCBI-GeneID:
123589629
NCBI-ProteinID:
XP_045317953
LinkDB
All DBs
Position
E3:3870675..3911360
Genome browser
AA seq
436 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DSLFLSASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICSLATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKLDGS
METTNEILDSASHDCPLVTQTYGAAVTTGTHVPSSPTRLAYADELGAAGGACLEEEASAL
RLEEDSEHPPMILRTD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagtcagagcggcgaggccggcgccggccagctgctcttcgccaacttc
aaccaggacaacacgtccctagctgttggtagtaagtccggttataaatttttctccctt
tcttctgtggataagctggaacagatctatgaatgcactgataccgaagatgtgtgcatc
gtagaaagattgttctccagcagcctagtggccatcgttagcctgaaagccccgaggaag
ctgaaagtctgccacttcaagaaaggcactgagatctgcaactacagctactcgaacacc
atactggccgtgaaactcaacaggcagcggctgatagtgtgcctggaggaatctctctac
atacacaacatccgggacatgaaggtactgcacacaatcagggagacccctccgaaccct
gcaggcttgtgtgcgttgtcgataaacaacgacaactgttacttggcgtacccgggcagt
gcgaccatcggagaggtgcaggtcttcgacaccatcaacttgagagctgcgaacatgatc
ccggctcacgacagtcctttggcggcgctggcattcgacgccagtggaaccaagctggcc
accgcctcggagaaggggaccgtgattagggtgttttccattccagagggacagaaactc
tttgagttccggagaggagttaagaggtgtgtgagcatctgctccttggccttcagcatg
gacagcctgttcctgtccgcgtccagcaacactgagactgtgcacatcttcaaactcgag
actgtgaaagaaaaacctcaggaggagcccaccacctggaccgggtacttcgggaaagtg
ctcatggcgtccaccagctacttgccctcccaagtaacagaaatgttcaaccagggcaga
gcctttgccacagtccgcctgcctttctgtggccacaagaacatctgctcgctggccaca
attcagaagattccccggctactggtgggagcttccgacgggtacttgtacatgtacaac
ctggacccccaggagggaggcgagtgcaccctgatgaagcagcacaagttggacggcagc
atggagaccaccaatgaaatcttggactcggcctctcacgactgccccctagtgacgcag
acctacggcgcggctgtcaccacaggtactcacgtgccttcgtctccgaccagacttgcc
tacgccgacgagctgggagccgcgggcggcgcgtgtctggaggaggaggccagcgctctg
cggctggaggaagacagcgagcacccccctatgattcttcggacggactga
DBGET
integrated database retrieval system
