Leopardus geoffroyi (Geoffroy's cat): 123589710
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Entry
123589710 CDS
T10761
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04612
Antigen processing and presentation
lgf05145
Toxoplasmosis
lgf05152
Tuberculosis
lgf05164
Influenza A
lgf05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
123589710 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
123589710 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
123589710 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
123589710 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
123589710 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lgf01001
]
123589710 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lgf04054
]
123589710 (CIITA)
Enzymes [BR:
lgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
123589710 (CIITA)
Protein kinases [BR:
lgf01001
]
Serine/threonine kinases: Other
TAF1 family
123589710 (CIITA)
Pattern recognition receptors [BR:
lgf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
123589710 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
123589710
NCBI-ProteinID:
XP_045318135
LinkDB
All DBs
Position
E3:complement(32925207..32971590)
Genome browser
AA seq
1204 aa
AA seq
DB search
MNHFQTILPRVRMLLAGHLPSQARALLDSMLERELLSREYHCALLREPDGEALARKISLT
LLEKGDPGLALLRWAWGTWQAPLAERDPDDKDRAGSGQCAAMELGPLEGGYLELLNSNAD
PLQLYHLCDQMDPAREEIELCSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQY
VFQDSQLEGLSKGIFIEHIGLEEMIGESVETLEEKKSQKRSFPEELPMDSKHRKLAEPLA
VPMVTGTFLVGSVSDSSALPCLSPPAVFNKEPASSQRWLEETILMPGPPSSSLLSCLSLS
AGHIQIVPTLPQGLWQISGAGTGVSGMVIYQGEVPQASQVLPSSSPAIHSLPKSPERPGS
TSPFAPSAADLPGMPEPALTSRADVTEEQMSPTRSPAAHEVSSQLPKWPERVEKFCGALR
DMYQAEPAGPEGILVEVELVRARLERSSSKSQERELATPDWAERQPARGGLAEVLLAGGD
RRRPRETQVIAVLGKAGQGKSRWAREASRAWARGQLPQYDFVFYLPCHCLDRGGDTYRLQ
DLLFSLGPRPLPVDDEVFGHVWRRPDRVLLILDASEGLEGQDGLLHSACGPVCTEPHSVQ
GLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADALFEVAGFSAEQAKTYLTRYLEHAG
ATERRERALELLQGQPFLLSHCHSPTLCRAVGQLFEALPELGGETELPSTLTGLYVGLLG
PAARDSPPGALAGLARLAWELGRRHRGTLLESQFPSEEARAWAVAKGLVQPAPGAAAVGL
AFSSFLLQCFLGAVWLALSSDIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPH
TDCLGALAGPAAATLKDRKQKVLTRYLKRLQPGTLRAGQLLELLHCTHETLDAGLWQHVV
QGLPARLSFVGTRLTPPHTYVLGSALEAAGRDFSLDLCSTGIDPPGLGSLVGLSCVTHFR
AALSDMVGLWESLQQRGEAKLLRAVEEKFTIEPFKAKSVKDVEDLGNLVQIQRTRSSSED
TAGELPAVRDLKKLEFALGPVSGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDEGVEQ
LSATFPRLKALETLNLSQNNITDVGACKLAEALPSLAASLLRLSLYNNCICDMGAESLAH
VLPDMGSLRVLDVQYNNFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQLDSR
ISLK
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctgcctcgggtccggatgctgctggccggccatctgccg
agccaggcccgggccctcctggacagcatgttggagagggagctcctctccagggagtac
cactgcgctctgctccgcgaacctgacggcgaggccctggccaggaagatctccttgacc
ctgctggagaaaggagacccaggcttggccctcttgaggtgggcatggggtacgtggcag
gccccgctggccgagagggaccccgacgacaaggaccgggccggcagtgggcagtgtgcc
gccatggagttggggcctctagagggcggctacctggagcttctcaacagcaatgctgac
cccctgcagctctaccacctctgtgaccagatggacccggctagagaagagattgagctc
tgctcagaacccgacatggacaccatcaactgcgagcagttcagcagactgttgtgtgac
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtac
gtgttccaggactcacaactggagggtctgagcaaaggcattttcatcgagcatatagga
ttggaagaaatgatcggcgagagtgtggagacgctggaggaaaagaaaagtcagaaaaga
tccttcccagaggagctgcccatggactcgaagcacaggaagctggctgagcccctcgct
gtgcccatggtgactggcactttcctggtggggtccgtgagtgactcctcagctctgccc
tgcctgtcaccccctgctgtgttcaacaaggagccagcatccagccagaggtggctggag
gagaccatcctgatgcctgggcccccttccagttccttgctgagctgcctgagcctttct
gctggacacatccagatcgtccccactctgccccagggtctctggcaaatctcaggggct
gggacaggggtatctggtatggtcatctatcaaggtgaggtgccccaggccagccaggtg
cttccttccagcagccccgccatacacagcctccccaaatccccagaacggcccggctcc
accagcccctttgccccgtctgccgctgacctccccggaatgccggaaccagctctgacc
tcccgtgcagatgtgacagaggagcagatgtcccctacccgatccccggcagctcacgag
gtctccagccagctcccaaaatggcctgagcgggtggagaagttctgcggcgcccttcgg
gacatgtaccaggctgagcccgcaggcccggaaggcatcctggtggaggtggaactggtg
agggcgcggctggaaaggagcagcagcaaaagccaggagagggagctggccaccccggac
tgggcagagcggcagccggcccgcgggggcctggctgaggtgctgctggcggggggtgac
cgccggcggccacgggagacgcaggtgatcgctgtgctgggtaaagcggggcaggggaag
agtcgctgggcccgggaagcgagccgggcctgggcccgcggccagctgccccagtacgac
ttcgtcttctacctcccctgccactgtttggaccgtgggggggacacctaccgcctgcag
gatctgctgttctccctgggcccccggccgctgccggtggacgatgaggtcttcggccac
gtctggaggaggcccgaccgggttctgctcatcctggatgcctccgagggcctcgaaggc
caagacggcctcctgcacagcgcatgtggacccgtgtgcacagaaccccactccgtccag
ggactgctggcgggcctcttccagcgtaagctgctgcgaggctgcaccctgctgctcacg
gcccggccccggggccgcctggcccagagcctgagcaaggccgacgctctgttcgaggtg
gccggcttctcagccgagcaggccaagacctacctgacacgctacttggagcacgcaggg
gcgaccgagcgccgagagagagccctggaactcctccagggtcagcctttcctcctcagc
cactgccacagccccactttgtgccgggccgtgggccagctgttcgaggccctcccggag
ctggggggcgagacggagctgccctccacgctcacgggactctacgtgggcctgctcggc
cctgccgcccgcgacagccccccgggggccctggcgggactggccaggctggcctgggag
ctgggccgcagacaccggggcaccttgctggagagccagttcccgtcggaggaggcgagg
gcctgggccgtggccaagggcttggtgcaacccgccccaggggccgcggcggtggggctg
gccttctccagcttccttctgcagtgcttcctgggggccgtgtggctggccctgagcagc
gacatcaaggacaaggagctgccgcagtacttggcgttgaccccgaggaagaagaggccc
tacgacaactggctggagggcgtgccgcggttcctggccgggctggttttccagccgcac
accgactgcctcggggccctggcggggcctgctgcggccaccctgaaggacaggaagcag
aaagtgctcaccaggtacctgaagcggctgcagccggggacgctgcgggccggacagctg
ctggagctgctgcactgcacccatgagactttggacgctgggctctggcagcacgtggtg
caggggctccccgcccgcctctccttcgtgggcacccggctcacgcctccccacacctat
gtcctgggcagcgccttggaggcggcgggccgagacttctccctggacctctgcagcact
ggcattgacccccctggactggggagcctcgtgggactcagctgcgtcacccatttcagg
gctgcgctgagtgacatggtggggctgtgggagtctctacagcagcgtggggaggccaag
ctgctccgggcggtggaagagaagttcaccatcgagcctttcaaggccaagtctgtgaag
gatgtggaagatctgggcaacctcgtgcagatccagaggacaagaagttcttcagaagat
acggctggagaactccctgcagtccgggatctaaagaaactggagtttgcgctgggcccc
gtctcaggcccccaggcttttcccaagctggtgaggatcctcgaggccttttcctccctt
cagcatctggatctggactctctgagcgagaacaagattggcgacgagggtgtcgagcag
ctgtcggccaccttcccgcggctcaaggccctggagaccctcaacttgtcccagaacaac
atcaccgacgtgggcgcctgcaagctcgccgaggccctgccctcgctggctgcgtccctc
ctcaggctcagtctatacaataactgcatctgtgacatgggagccgagagcctggcacac
gtgcttccagacatggggtccctccgggtgctggatgtccagtataacaacttcacagcc
gccggggcccagcagctggccgccagcctgagaaagtgccctcacgtggagacgctggcg
atgtggacgcccaccatcccgtttggcgtccacgagcacctccagcagctggattcgcgg
atcagcctgaagtga
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integrated database retrieval system
