Leopardus geoffroyi (Geoffroy's cat): 123590414
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Entry
123590414 CDS
T10761
Symbol
BHLHE41
Name
(RefSeq) class E basic helix-loop-helix protein 41 isoform X1
KO
K03730
class B basic helix-loop-helix protein 3
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
123590414 (BHLHE41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123590414 (BHLHE41)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
123590414 (BHLHE41)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
123590414
NCBI-ProteinID:
XP_045319539
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Position
B4:complement(59848206..59853027)
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AA seq
595 aa
AA seq
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MVRSARELGAGLAGDARALWPNTARSESKLPAQWGRRECACVCVRVCERASAVGGGGNQL
LHTFNTALKKGERETGDAQIPPRSPKAIVPQIIKQNPKNRNRGNGQRLNMDEGIPHLQER
QLLEHRDFIGLDYSSLYMCKPKRSMKRDDSKDTYKLPHRLIEKKRRDRINECIAQLKDLL
PEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSLKSPIQSDLDAF
HSGFQTCAKEVLQYLSRFESWTPREQRCVQLINHLHAVATQFLPTPQLLTQQVPLSKGTG
APSAAAPAGSAAAPCLERAGQKLEPLAHCVPVIQRTQPSAELAAENDTDTDSGYGGEAEA
RPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGGGGLGGGAAAAAAALLGPDP
AAAAALLRPDAALLSSLVAFGGGGGAPFAQPAAAAAAAAPFCLPFYFLSPSAAAAYVQPF
LDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAG
AAAATLLPHEVAPPGALHPPHPHGRTHLSFAGAREPGNPESSAQEDPSQPGKETP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggtacgttccgcacgtgagctgggtgctggtctggccggcgacgcgcgtgccctgtgg
ccaaacactgcccggagtgagagcaaactaccagcgcagtggggccggcgcgagtgtgcg
tgcgtgtgtgtgcgtgtgtgcgagagagcgagcgcggtgggagggggggggaaccaactg
cttcacactttcaacactgcactgaagaagggagagagagagactggagacgcacagatc
cccccaagatctcccaaagctatcgtcccacagattataaaacagaaccccaaaaatcga
aacagaggaaacggacagcggttgaacatggacgaaggaattcctcatttgcaagagaga
cagttactggaacatagagattttataggactggactattcctctttgtatatgtgtaag
cccaaaaggagcatgaagcgagacgatagcaaggatacctacaaattaccgcacagatta
atagaaaagaaaagaagagatcgaattaatgaatgcattgctcagctgaaagatttactg
cctgaacatctgaagttgacaactctggggcatctggagaaagcggtagtattggaatta
actttgaaacacttaaaagctttaacagccttaaccgagcagcagcatcagaagataatt
gctttacagaatggggagcgatctctgaaatcgcccattcagtccgacttggatgcgttc
cactccggatttcaaacatgcgccaaagaagtcttgcaatacctctcccggtttgagagc
tggacgcccagggagcagcggtgtgtccagctgatcaaccacttgcacgccgtggccacc
cagttcttgcccacccctcagctgttgactcaacaggttcctctgagcaaaggcactggc
gcgccatcggccgccgcccccgcagggtctgcggccgccccctgcctggagcgcgccggg
cagaagcttgagcccctcgcccactgcgtcccggtcatccagcggactcagcccagcgcc
gagctcgccgccgagaacgacacggacaccgacagcggctacggcggcgaggccgaggct
cggccggaccgcgagaagggcaaaggcgccggggcgagccgcgtcactatcaagcaggag
ccccccggggaggactcgccggcgcccaagaggatgaagctggattcccgcggcggcggc
ggcggcggcctggggggcggcgcggcggcggcggcggccgcgctcctggggcccgacccg
gccgccgcggcagcgctgctgagacccgacgccgccctgctcagctcgctggtggctttc
ggcggaggcgggggcgcgcccttcgcgcagcccgcggccgccgcggccgccgcggccccc
ttctgcctgcccttctacttcctctcgccttcggcggccgccgcctacgtgcagcccttc
ctggacaagagcggcctggagaagtacctgtatccggcggcggccgccgccccgttccca
ctactgtaccccggcatccccgcgccggcagccgccgccgccgccgccgctgcagccgcc
gccgccgccgccttcccctgcctgtcctcggtgttgtcgccccctcccgagaaggccggc
gccgccgccgcgaccctcctgccgcacgaggtggcgccccctggggcgctgcaccccccg
cacccgcacggccgcacccacctgtccttcgctggcgcccgtgagcccgggaacccggag
agctctgctcaggaagatccctcgcagccaggaaaggagaccccctga
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