Leopardus geoffroyi (Geoffroy's cat): 123590567
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Entry
123590567 CDS
T10761
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04082
Neuroactive ligand signaling
lgf04721
Synaptic vesicle cycle
lgf04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123590567 (SLC6A12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
123590567 (SLC6A12)
04721 Synaptic vesicle cycle
123590567 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgf02000
]
123590567 (SLC6A12)
Transporters [BR:
lgf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123590567 (SLC6A12)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
123590567
NCBI-ProteinID:
XP_045319780
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Position
B4:37391672..37418824
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AA seq
614 aa
AA seq
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MDRKMEVPEDGPPVVSWLPEEGEKLDQEGEDQVKDRGQWTNKMEFVLSVAGEIIGLGNVW
RFPYLCYKNGGGAFFIPYFIFFFTCGIPVFFLEVALGQYTSQGSVTAWRKICPLLQGIGL
ASVVIESYLNIYYIIILAWALFYLFSSFTSELPWTTCTNTWNTEHCVDFMNHSGARTATP
SENFTSPVMEFWERRVLGITSGIHDLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVY
FTATFPYLMLIILLIRGITLPGAYEGVIYYLKPDLLRLKDPQVWMDAGTQIFFSFAICQG
CLTALGSYNKYHNNCYRDCIALCFLNSATSFAAGFVVFSILGFMAQEQGMPISEVAESGP
GLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASVDMFPGQLRKSGR
RELLILTIAIVCYLLGLFLVTEGGMYIFQLFDYYASSGICLLFLAVFEVICISWVYGADR
FYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLKYNNIYVYPPWGYSIGW
FLALSSMVCVPLFIIITLLKTQGSFKKRLQQLTTPDPSLPQPKQHLYLDRGTSQDCGPSP
TKEGLIIGEKETHL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaaatggaagtccccgaggacgggcctcctgtggtctcctggctccctgag
gagggagagaagctggaccaggaaggcgaggaccaggtgaaggatcggggccaatggacc
aacaagatggagtttgtgctgtcagtggccggggagatcattgggctgggcaatgtctgg
aggtttccctatctctgctacaaaaatggaggtggagccttcttcatcccctacttcatc
ttcttcttcacctgtggcatcccagtgttcttcttggaggtggcgttgggccagtacacc
agccaagggagcgtgacagcctggaggaagatctgcccccttctccagggcattggtctg
gcgtcggtggtcattgagtcctacctgaacatctactacatcatcatcctcgcctgggct
ctcttctacctgttcagctcctttacctctgagctgccctggacaacctgtaccaatacc
tggaacacagagcattgcgtggactttatgaaccattcaggagcccgcacagcgaccccg
tctgagaacttcacttcacctgtcatggaattctgggagagacgtgttttgggcatcacc
tcaggcatccatgacctgggggccctgcgttgggagctggccctgtgcctcctgcttgcc
tgggtcatctgctacttctgcatctggaaaggggtcaagtccactggcaaggttgtttat
ttcacagccacatttccctacctgatgctgatcatcctactgatccgaggcatcaccctt
ccgggagcctacgagggtgtcatctattacctgaagccagatttgcttcgcctcaaggac
ccccaggtgtggatggacgcgggcacccagatcttcttctccttcgccatctgccagggg
tgcctgacagccctgggcagctacaacaagtaccacaacaactgctacagggactgcatc
gccctctgcttcctcaacagcgccaccagcttcgcggccgggttcgtggtcttctccatc
ctgggcttcatggcccaggagcaggggatgcccatctctgaagtggccgagtctggtcct
ggtctagccttcattgcgttccccaaggcggtgactatgatgcccttatcccagctgtgg
tcctgccttttcttcatcatgctcatcttcctagggctggacagccagtttgtctgtgtg
gagtgcctggtgacagcctctgtggacatgttccccggtcagctccggaagagcgggagg
cgagaacttctcattctcaccattgccatcgtgtgctacctgctagggctcttcctggtc
acagagggcgggatgtatatcttccagctgtttgattattacgcttccagtggcatatgc
ctgctcttcttggcagtgtttgaagtgatctgcatcagctgggtgtatggggcagatcgg
ttctatgacaacgttgaagacatgattggctaccggccatggcccttggtgaagatctcc
tggctctttctgacccctggactttgcctggccaccttcctcttctccttgagcaagtac
acacctctcaaatacaacaacatctatgtgtaccctccttggggctactccatcggctgg
ttcttggctctgtcctccatggtctgcgtccctctgttcatcatcatcacccttctgaag
acccagggttccttcaagaagcgcctgcaacagctcaccacccccgaccccagcctcccg
cagcccaagcaacacctgtatctggaccgtggtaccagccaggactgtgggccttcccca
acaaaagaaggactaatcattggggagaaggagacccacttgtag
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