Leopardus geoffroyi (Geoffroy's cat): 123590850
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Entry
123590850 CDS
T10761
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgf04131
]
123590850 (PPFIBP1)
Membrane trafficking [BR:
lgf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123590850 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
PUMA_CC
DUF4407
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
123590850
NCBI-ProteinID:
XP_045320360
LinkDB
All DBs
Position
B4:61206033..61379463
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AA seq
1035 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMDTDEKEGLRCQIPDSTAETLVEWLQSQMTNGHLPGNGEVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLK
LKLTAVEKDRLDYEDRFRDTEGLMQEINDLRLRVSEMDNERLQYEKKLKSTKSLMAKLSS
MKIKVGQMQYEKQRMERKWESLKDELASLKEQLEEKESEVKRLQEKLVCKMKGEGMEILD
RDENFKKKLKDKNIEVQKMKKAMESLMAANEEKDRKIEDLRQCLNRYKKMQDTVVLAQGK
KGQDSDFEDLLTSSSISTLLDAQGFSDLEKSLSPTPVMGSPSRDPFNTSVPEEFHTGILQ
VSVPSLLPTSKGLEISEKAKLPQPETSFEENDGKIILGAAVETQPSDSLSTSSLQKSSSL
GNLKKESSDGDTESVQKPSEDKTPAESSPFGSLPPKAPGHDASMDDNPFGTRKARSSFGR
GFFKIKSNKRTASAPNLDRKRSASAPTLAETEKETAEHLDLAGVSSRPKDAPGSSPFQIS
PPSPDSKKKSRGIMKLFGKLRRSQSTTFNPDDMSEPEFKRGGTRATAGPRLGWSRDLGQS
NSDLDMPFAKWTKEQVCNWLVEQGLGSYLNSGKHWIASGQTLLQASQQDLEKELGIKHSL
HRKKLQLALQALGSEEETNHGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVD
DLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENSITPSEVQQWTNHRVMEWL
RSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPSKTLLRRHLATHFNLLIGA
EAQHQKRDAMELPDYVLLTATAKVKPKKLTFSNFGNLRKKKQEDGEEYVCPMELGQASGS
TCKKGFKPGLDMRLYDEDELDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDDMFRDFT
ARSPSASITDEDSNV
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgacatgctggctgcggcgctggagcagatggacgggattata
gcaggttctaaggccttggaatattccaatggaatttttgattgccagtctcccacctcc
ccgttcatgggaagcctgcgagctctgcaccttgtagaagacctgcgtgggttgttagag
atgatggacacagatgagaaggaaggtttgaggtgccagatcccagattcaacagcggaa
acactcgtcgaatggcttcagagtcaaatgacaaatggacacctgcctgggaatggagag
gtgtatcaagaaaggctagcccgtttagaaaatgataaagaatctctcgttcttcaggta
agtgtgttaacagaccaggtagaggctcagggagagaagattcgagatttggagttttgt
cttgaagagcacagggagaagctgaacgccacagaagaaatgctgcagcaggagcttctg
agtaggacatccttagagactcagaagttggatctgatggctgaaatctctaacttgaag
ctaaaactgacggctgtagagaaggacagattggactatgaagacaggttcagagacaca
gaggggctaatgcaagagatcaatgatttgaggttaagagtcagtgaaatggacaatgaa
agacttcagtatgaaaaaaagctgaagtcaaccaaatctttaatggccaaactttctagc
atgaaaatcaaggtgggtcagatgcagtatgaaaagcagcggatggagcgaaaatgggag
tcactgaaggatgaactggcatctttaaaagaacagctagaagagaaggaatctgaagta
aaaaggctacaagaaaaattggtgtgcaagatgaaaggagaagggatggaaattcttgat
cgagatgaaaattttaaaaagaagctcaaagacaaaaatattgaagtacaaaaaatgaaa
aaggctatggagtctttgatggcagcaaatgaagaaaaggatcggaaaatagaagatctt
cgccagtgcctgaacaggtacaagaaaatgcaagatacggtggtactggcccaaggtaaa
aaaggccaagatagcgactttgaagatctgctcacatccagttccatctccactttgctg
gatgcacaaggttttagtgacctggagaaaagtctgtcacctacaccagtaatgggatct
cccagccgtgacccatttaacacaagtgttccagaagagttccacactggtatcttgcaa
gtttcggtcccttcattattgccaacatctaagggcttggaaatttccgaaaaagcaaaa
ttgcctcaaccagagacttcgtttgaagagaatgatggaaaaataatccttggtgctgct
gttgaaacccagccttctgatagtctttcaacttcgagtctgcaaaagtccagcagcctg
ggcaatctgaagaaagagtcatcagatggggatacagagtctgtccagaagccttcagag
gataaaactccggcagaaagcagcccatttggaagcctccctccaaaagctccaggacat
gatgcctccatggatgacaacccctttggcactcgaaaagccagatcttcctttgggcgt
ggcttttttaaaataaaaagtaacaagaggacagcaagtgcccccaacttggatcgtaaa
cgaagtgccagtgcacccaccttagctgaaacagagaaggagacagctgagcacctagat
cttgctggtgtatcttcccggccaaaagatgcgccgggaagtagtcccttccagatatct
ccgccatcgccagattccaaaaagaaatccagaggtatcatgaaactctttggaaaactt
aggagaagtcagtcaactacattcaacccagatgacatgtctgagcctgaattcaaaaga
ggaggaacaagggcaaccgcagggccgcgactgggttggtctcgagatttgggacagtct
aacagtgacttggacatgccatttgccaaatggaccaaggaacaagtttgcaattggctt
gtggaacaaggcttggggtcctacctgaattctggaaagcattggattgcatctggccaa
acacttttgcaggcttctcaacaagatctagagaaggaacttggaattaagcattcactt
catcgaaagaaactccagctggcactgcaagccctgggctccgaagaagaaaccaatcac
ggaaagctggatttcaactgggtcactcgatggttggatgatattggtctcccccagtac
aagacgcagtttgacgaaggacgagtagatggtcgaatgctccattacatgactgttgat
gacttactgtctttgaaggttgtgagtgtgctgcaccatctcagtatcaaaagggctatt
caggtcctgaggatcaataactttgaaccaaactgtctgcggaggcggccatctgatgag
aatagcatcaccccatcagaggttcagcagtggaccaaccatcgtgtgatggagtggcta
cgctccgtggacttggcagaatatgcccccaatctcagaggcagtggtgttcatggtggg
ctcatggttctagaacctcgttttaatgtagaaacaatggctcagttattgaatatccca
ccaagtaagaccctcttgcgaagacatttggccactcatttcaaccttctgattggtgct
gaggcccagcaccaaaagcgtgatgccatggagttaccagattatgtacttctaacagcc
actgccaaagtgaagccaaagaaactgaccttcagcaattttgggaatctgagaaagaag
aaacaggaggatggggaagaatatgtttgtccaatggaattgggacaggcatcaggaagt
acatgcaagaaaggatttaaacctggtttggacatgcgcctgtatgatgaagatgagtta
gaccggttagagcagatggaagattcagaagggacagtgagacagataggtgcgttctct
gaaggcatcaacaatctaacgcacatgttaaaggaggacgacatgttcagagacttcacc
gcccgttcccccagtgccagcatcaccgacgaggactccaacgtttaa
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