Leopardus geoffroyi (Geoffroy's cat): 123591228
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Entry
123591228 CDS
T10761
Symbol
SHANK3
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
123591228 (SHANK3)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
123591228
NCBI-ProteinID:
XP_045321136
LinkDB
All DBs
Position
B4:142652527..142704307
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AA seq
1815 aa
AA seq
DB search
MQLSRAAAAAAAAPAEPSAQLSPAPAPAPAPPGPLPRSAADGAPAGGKGGPGSRAEPPCA
PLPAASLPGPGRGAGTGAGMDGPGASAVVVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLC
ALNHSLQDALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQNL
IDDKQFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDN
ATDLLKVLRNGGAHLDFRTRDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLY
HSALGGGDALCCELLLHDHAQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGADMGAQNA
SGNTALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDS
DVVPFRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLL
LQRLQEEKDRDRDGDQENDIGGPTAGRGSQSKISPSGPGGPGGPGPAPGPGPAPPAPPAP
PPRGPKRKLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTG
WFPADCVEEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAVLQKRD
HEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNV
VKVGHKQVVALIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTA
ELEELASIRRRKGEKLDEILAAATEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLF
ERQGLPGPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRGIPPPPQ
TAPPPPPAPYYFDSGPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGAAGLYDSGAPLG
PLPYPERQKRARSMIILQDSAPEAGDTPRPPPAATPPERPKRRPRPPGPDSPYANLGAFS
ASIFAPSKPQRRKSPLVKQLQVEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRPSGLD
YGPGESPGLAFGGPGPGKDRRLEERRRSTVFLSVGAIEGSTPSTDLPSLQPSRSIDERLL
GAGAATTTTGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAAR
ERALASQAPSRSPTPVHSPDADRPGPLFVDVQARDSERGALASPAFSPRSPAWVPVPARR
EPEKAPREERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPSGLGAEEERPGTPE
LAPAPAQSAVVAEPLASPRAQPPGSTAPTDPGPGQGSSEEEPELVFAVNLPPAQLSSSDE
ETREELARIGLVPPPEEFANGVLLATPLPGPGPSPTVVPGPASGKPSSEPPPAPESAADS
GVEEADTRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPK
PKLKSPLGKGPVTFRDPLLKQSSDSELMAQQHAASAGLASAAGPARPRYLFQRRSKLWGD
PVESRGLPGPEDDKPTVISELSSRLQQLNKDTRSLGEEPVGGLGGLLDPAKKSPIAAARL
FSSLGELSSISAQRSPGGPGGGASYPVRPGGRYPVARRAPSPVKPASLERVEGLGAGAGG
AGRPFGLTPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPAPGPGPGAPGP
RRPFQQKPLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVG
HRMNIERALRQLDGS
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccgccgccgccgccgccgcccctgcggagccctcggcgcag
ctgtcccccgcgccggccccggccccggccccccccggtcccctcccgcgtagcgcggcc
gacggggctccggcgggggggaagggggggccggggagccgcgcggagcccccgtgcgct
ccgctcccggccgcgagcctcccgggccccggccggggcgcgggcacgggcgcggggatg
gacggccccggggccagcgccgtggtcgtgcgcgtcggcatcccggacctgcagcagacg
aagtgcctgcgcctggacccggccgcccccgtgtgggccgccaagcaacgcgtgctctgc
gccctcaaccacagcctccaggacgcgctcaactacgggctcttccagccgccctcccgg
ggccgcgcaggcaagttcctggacgaggagcggctcttgcaggagtacccgcccaacctg
gacacgcccctgccctacctggagtttcgatacaagaggcgagtttatgcccagaacctc
atcgatgataagcagtttgcaaagcttcacacaaaggcaaacctgaagaagttcatggac
tacgtccagctgcacagcacggacaaggtagcccgcttactggacaaggggctggacccc
aatttccacgatcctgactcaggagagtgtcctctgagccttgccgcccagctggacaac
gccacggacctgctgaaggtgttgaggaacggcggtgctcacttggacttccgcacccgc
gatgggctcactgccgtgcactgtgccacgcgccagcggaatgccgcagccctgacgact
ctgctggacctgggcgcttcacctgactacaaggacagccgcggcctgacgcccttgtac
cacagtgccctggggggcggggatgccctctgctgcgagctgctccttcacgaccatgct
cagctggggaccactgatgagaacggctggcaggagatccatcaggcctgccgctttggg
cacgtgcagcacctggaacacctgctgttctatggagctgacatgggggctcagaacgcc
tcgggaaacacagcgctgcacatctgtgccctctataaccaggaaagctgtgctcgagtc
ctacttttccgtggagctaacaaggatgtccgcaattacaatagccagacagccttccag
gtggccatcatcgcagggaactttgagcttgcagaggtcatcaagacccacaaagactcg
gatgttgtaccattcagggaaacccccagttatgcaaagcggcggcggttggctggcccc
agtggcctggcctcccctcggcccctgcagcgctcagccagtgacatcaacctgaagggt
gaggtgcagccggcagcttctcctggaccttctctgcgaagcctcccccatcagctgctg
ctccagcggctgcaggaggagaaagaccgggatcgggatggtgaccaagagaatgacatc
ggtggccccacggcaggcaggggcagccagagcaagatcagcccgagcgggcccggcggc
cccggcggccccggccccgcgcccggccccggcccggcgccccccgcgccccccgcgccg
ccgccccggggcccgaagcggaaactttacagcgccgtccccggccgcaagttcatcgcc
gtgaaggcgcacagcccgcagggcgagggcgagatcccgctgcaccgcggcgaggccgtg
aaggtgctcagcattggggagggcggtttctgggaggggaccgtgaaaggccgcacgggc
tggttcccggctgactgcgtggaggaggtgcagatgagacagtatgacacacggcatgaa
acccgggaagaccggacgaagcgccttttccgtcactacacagtgggctcctatgacagt
ctcacttcacacagcgattacgtcattgacgacaaggtggctgtcctacagaaacgggac
catgagggctttggttttgtgctccggggggccaaagcagagacccccatcgaggagttt
acacccacgccggccttccctgcgctccagtatcttgagtcggtggatgtggagggtgtg
gcctggagggccgggctgcgcacaggagacttcctcatcgaggtgaacggggtgaacgtg
gtgaaggtcgggcacaagcaggtggtggctctgatccgccagggcgggaaccgcctcgtc
atgaaggttgtgtctgtgacgaggaagccagaagaagacggggctcggcgcagagccccg
ccgccccccaagagggctcccagcaccacgctgaccctgcgctccaagtccatgacggct
gaacttgaggaactcgcctccattcggagaaggaaaggggagaagctggatgagatcctg
gcagccgccacggagcccacgctgaggccagacatcgcggacgctgactccagagctgcc
actgtcaaacagcggcccacgagtcggaggatcacacctgctgagatcagttctttattt
gagcgccagggccttccaggcccagagaagctgcccggctccctgcggaaggggattcca
cggaccaagtctgtaggggaggatgaaaagctggcgtccctgctggaagggcgctttcca
cgcagcacgtccatgcaagatacggtgcgtgagggccgtggcatcccgcccccgccgcag
accgcaccgccgcccccacccgctccctactacttcgactccgggccgccccccgccttc
tcgccgccaccccctccaggccgcgcctacgacacagtgcgctccagcttcaagcccggc
ctggaggcgcgcctgggcgctggggccgcgggcctgtacgattccggcgcgcccctgggt
ccgctgccctacccggagcggcagaagcgtgcgcgctccatgatcatccttcaggactcg
gcgccggaggcgggcgacaccccccggcctcctccggcggccaccccaccggagcgtcca
aagcggcggccgcggccgccgggccccgacagtccctacgccaacctgggcgctttcagc
gccagcatcttcgcgccgtccaagcctcagcgccgcaagagcccgctggtgaagcagctg
caggtggaagacgctcaggagcgcgcagccctggcagtgggcagccctggcccgggtggc
ggcagcttcgcccgggagccctccccgacgcaccgtgggcctcggccaagcggccttgac
tacggccccggggaaagccccggcctcgcgttcgggggcccaggcccgggcaaggaccgg
cggctggaggagcggcgccgctcaaccgtgttcctgtcggtgggagccatcgagggcagc
acgcctagcacagacctgccctccctgcagccctcccgctccatcgatgagcgcctgctg
ggggctggcgccgccaccaccaccaccggccgagacctgctcctgccctcccccgtctct
gctctgaagccattggtcagcggcccgagccttgggccttcaggctccaccttcatccac
ccactcaccggcaagcccctggaccccagctcgcccctggccctcgccctggccgctcga
gagcgtgctctggcctcccaggcgccctcccggtcccccacgcctgtgcacagccctgac
gctgaccgccctgggcctctgttcgtggatgtacaggcccgcgactctgagcgaggggcg
ctggcctccccagccttctccccaagaagccccgcctgggttcctgtgcctgctcggagg
gagccggagaaagcaccccgggaggagcgcaagtcgccagaggacaagaagtccatgatc
ctcagcgtcctggacacatccctgcagcggccggccggcctcatcgtcgtgcacgccacc
agcaatgggcaggagcccagcgggctgggggctgaagaggagcgcccgggcaccccggag
ctggcccctgcccccgcacagtcggcagtggtggcagagcccctggcgagcccccgggct
cagccccctggcagcacggctccgacagaccccgggccgggccagggcagctccgaggag
gagccagagctggtgttcgctgtgaacttgccgcccgcccagctgtcctccagtgatgag
gagaccagggaggagctagcccgcattgggctggtgccacctcccgaagagtttgccaac
ggggtcctgctggccaccccacttcctggcccaggtccctcacccaccgtggtgccaggc
ccggcctcagggaagccgagcagcgagcctcctcctgcccctgagtctgccgctgactca
ggggtggaggaggctgacacacgcagctccagcgacccccacctggagaccacaagcact
atctccacggtgtccagcatgtccaccctgagctcggagagtggggagctcactgacacc
cacacctccttcgccgatggacacacttttctactcgagaagccaccagtgcctcccaag
cccaagctcaagtccccgctggggaaggggccggtgaccttcagggacccgctgctgaag
cagtcctcggacagtgagctcatggcccagcagcatgccgcctctgccgggctggcctcc
gctgccggacctgctcgccctcgctacctcttccagagaaggtccaagctgtggggggac
cccgtggagagccggggactcccagggcctgaagatgacaaaccaactgtgatcagtgag
ctcagctctcgcctgcagcagctcaacaaagacacacgctccttgggggaagagccggtt
ggtggcctgggcggcctgctggaccctgccaagaagtcgcccatcgcggcagctcggctc
ttcagcagcctcggtgagctgagctccatctcagcgcagcgcagccctgggggcccgggc
ggcggggcctcctacccggtgcggcccggcggccgctaccccgtggcgcggcgcgccccg
agcccagtgaagcccgcgtcgctggagcgggtggaggggctgggggcgggcgcggggggc
gcggggcggcccttcggcctcacgcctcccaccatcctcaagtcgtccagcctctccatc
ccgcacgagccgaaggaggtgcgctttgtggtgcgcagcgtgagcgcacgcagccgctcg
ccctcgccgtcgccgctgccctcgccagcgcctggccccggccccggggcccccggcccg
cgccggcccttccaacaaaagccgctgcagctgtggagcaagttcgacgtgggcgactgg
ctggagagcatccacttgggcgagcaccgcgaccgcttcgaggaccacgaaatcgagggc
gcgcacctgccggcgctcaccaaggacgacttcgtggagctgggcgtcacgcgcgtgggc
caccgcatgaacattgagcgcgcgctcaggcagctggacggcagctga
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