Leopardus geoffroyi (Geoffroy's cat): 123591279
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Entry
123591279 CDS
T10761
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123591279 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123591279 (DCP1B)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123591279 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
123591279 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
123591279
NCBI-ProteinID:
XP_045321318
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All DBs
Position
B4:35675186..35735186
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AA seq
621 aa
AA seq
DB search
MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKNLTQYEQLKAHQGAGAGNSPMILNSGEGKEVDILRMLTKAKDEYTKCKTCSE
PKQITSSSAIYDNPNLIKPIPVKPSENQQQRIPRPSQTLDPEPQHLSLTALFGKQDKSTC
QETVGSPQTIRHQQQQQQQQQQQQQEKLPVRQGVVRSLSYEEPRRHSPPLEKQLCPAIQK
LMVRSTDLHPLSELPENRPCKNGNTCSAGEVFLGPVQPGSPHSIGTSCHVQSASRTQNLL
EKLQSTPRSANKYEPSIPAPAGSAAPNLSTTLPAATPGAPVRGLVQAQVGYFNGSLPPQT
PGHQAHGKEQSTHPRPTLPLSGNQMSSSGVISPQELLKKLQIVQQEQQLHASNRPALAAK
FPVVTQSSRTGKTLESWIDKTPSTEKQTPLFQAISPPRVLATVAPSLLMSPMVFTQPTCA
PPKERDSGLLPLGSQEPAATSTSLLLPLQTPEPPAVTSSPLTKLQLQEALLYLIQNDDNF
LNIIYEAYLFSMTQAAMKKTM
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggcagcgggcggcctggtgggaaaggggcgcgacatcagcctggcggcc
ctgcagcgccacgacccctatatcaaccgcatcgtggacgtagccagccaggtggctctg
tacactttcggccatcgggccaacgagtgggaaaagactgatgtggaaggaactttattt
gtttacacaaggtctgcttctccaaagcatgggttcaccattatgaataggttgagcatg
gaaaacaggacagaacccattactaaagacctggatttccagctccaggaccctttcctt
ctctacagaaatgccagattgtccatttatggaatttggttttatgataaggaagaatgc
caaagaattgcagagcttatgaaaaacctaactcagtatgaacagttgaaagcccatcag
ggagctggagcaggaaactccccgatgatcctcaattcaggagagggcaaggaagtagat
atcttgcgaatgctcaccaaggccaaagatgaatacaccaagtgtaaaacctgttctgag
ccaaaacagataaccagttcatctgctatctatgacaaccccaatctcatcaaaccaatt
ccagtgaagcctagtgaaaaccagcaacagcgcatacctcggcccagccagaccttagac
cctgaaccacaacacttgtccttgacagctctctttgggaagcaggacaaatctacatgt
caagaaactgtggggtccccacagactatccgccaccagcagcagcagcagcagcagcag
cagcagcagcagcaggagaaacttccggtcaggcagggggttgtacgctctctctcctat
gaggaacccagaagacactcaccccccctcgagaaacagctctgtccggccattcagaaa
ctcatggtcaggagtacagacctccatccattgtcagagctgcctgaaaaccggccctgc
aaaaatggcaatacctgttctgctggggaggtttttctgggacctgtccagccagggtct
ccccatagcattgggacttcctgtcatgtacagagtgcttccagaactcagaacctgttg
gagaagcttcagagcaccccaaggtcagcgaacaagtatgagcctagtataccagcacct
gctggctcagctgccccaaacctcagtaccactctccccgctgccacccctggcgctcca
gtaaggggactggtgcaggcacaggtggggtatttcaatggctcccttccacctcagaca
ccaggacatcaggctcacggaaaagagcagtcaacacacccgagaccgacactccccctc
tctggcaatcagatgagcagctctggagtgatctcccctcaagagttactgaaaaagctt
cagattgtacagcaggagcagcagttgcacgcatctaaccggccggctttggcagcgaaa
ttccccgtggtaacccagagctctaggacagggaagaccttggagtcctggatagacaag
acacccagcacagaaaagcagactcctctttttcaggccatctcacctccgcgcgtcctt
gctacagtggctccttctctgctcatgtcccctatggtgttcacacaacccacctgtgcc
ccaccaaaggagagggacagtgggctcctgcctctgggaagccaagaaccagctgccact
tccaccagcctcctcctgcctctgcagaccccagaaccccctgcagtcaccagcagccca
cttaccaagctccagcttcaggaagcactgctgtacctcattcagaacgatgacaacttc
ttgaatataatctacgaagcttatctcttcagcatgacacaagcagccatgaaaaagaca
atgtga
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