Leopardus geoffroyi (Geoffroy's cat): 123591649
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Entry
123591649 CDS
T10761
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgf03009
]
123591649 (UTP20)
Ribosome biogenesis [BR:
lgf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123591649 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
GLTP
MBTPS1_3rd
Rgr-1_C
Motif
Other DBs
NCBI-GeneID:
123591649
NCBI-ProteinID:
XP_045322131
LinkDB
All DBs
Position
B4:122336943..122444451
Genome browser
AA seq
2800 aa
AA seq
DB search
MKTKPMSHKTENTYRFLTFAERLANVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQTKNSFAYQPLLDLVVQLARDLQT
DFYPHFQDFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSNIYSMYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLDEHPEKVEGVGQLLFEMCKGVRNMFH
SCTGKAVKLILQKLGPVTETETQLPWILVGETLKNMVKSTVSYIYREHFGPLFECLQESL
LDLHRKVTTMNCGESSEQIRRLLETYLILVKHGNGSKITKPVDVCEVLCQTIHIASLSTT
CRETLLAVISALILGENVSLPDTFIKETIQKIFESGFERRLILDFSEVMFVMKQFEQLFL
PSFLLYIENCFLIDEAAVKDEALAILAKLILNKAAPPTAGSMAIEKYPLLFSQQTVGSCV
RQKKTRSKGGKEQIPVLDHLLSLIQLPANKDSTYLSHSWAALVVLPHIRPLEKEKVIPVV
TCFIESLFMNVDRESFAKGNLFVLCQAVNTMLSLEESSEILHLVPVERVKNLVLTFPVEP
SVLLLADLYYQRLSLCGCKGPLSEEALMELFPRLQANISTGISKIRLLTIRILNHFEFRL
PELMEDDGLSERQSALAILRQAELVPATVSDYREKLLHLRKLRHDMVQAAVPDGPLQEVP
LRYLLSMLYVNFSALWDPVIELISSHAHEMDNKQFWKVYYEHLEKAALHAEKELQNDVRD
EKSIGDESWEQPQEGDVGALYHEQLASKTDCQERLDHTNFRFLLWRALAKFPERVEPRSR
ELSPLFLRFIHNEYYPADLQAAPTQDLRRKGKGVAAEETEEEPDAGDNEELEEAVPMDEP
SQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYDLYLQLLLHQDQMVQKITLDCIM
TYKHPHILPYRENLQRLLEDRSFKEEIVHFSISEDNAVVKTAHRADLFPILMRILYGRMK
NKTGSKTQGKSASGTRMSIVLRFLAGTKPEEIETFLDLLFEPVKHFKNGECHSAVIQSVE
DLDLSKVLPLGRQHGILNSLEIVLKNISHLISAYLPKILQILLCMTATVSHILDQREKIQ
LRFINPLKNLRRLGIKMVTDIFLDWESYQFRTEEIDAVFHGAVWPQIGRLGSESPYSPTP
LLKLISIWSRNARYFPLLAKQKPGHPECDILTNVFAILSAKNLSEATASIVMDIADDLLN
LPDFEPTETLSSLPVTGCEYTERTDESITMGGRLILPHVPAILQYLSKTTISAEKVKKKK
NRAQVSKELGILSKISKFIKDKEQSSLLITLLLPFLHRGNIAQDTEVDILVTVQNLLKHC
LEPTSFLKPLAKLFSVIKNKLSRQLLCKVFQTLSDFESGLKYITDVVKLNAFDQRHLDSI
NFDVRFSAFQTITSCIKEMQTVDVNYLILVMHNCFYNLELGDMSLSDNASICLMSIIKKV
AALNVTEKEYREIIHRSLLEKLRKGLKSQTENIQQDYTTVLSCLIQTFPNQPEFKELVQL
TDCHDPEMDFFENMKHIQIHRRARALKKLAKQLMEGKVMLSSKSLQNYIMPYAMTPIFDE
KMLKHENITIAATEVIGAICKHLSWSAYIYYLKHFIHVLQTGQINQKLGVSLLVIVLEAF
HFDHKTLEEQMRKIQNEESDFCCLLNIDTVEVIELPENETMELEHMDEEEKENKCKNLSD
NNKEPGNPDPAECQGASAKEPECVTGSISFLPRNKEELERTIKNIQGTITGDILPRLHKC
LASTTKREEEHKLIKSKVVNDEEVVRVPLAFAMVKLMRSLPQEVMEANLPSILLKVCALL
KNRAQEIRDIARSTLAKIIEDLGVHYLQYILKELQSTLVRGYQVHVLTYTVYMLLQGLTN
KLQVGDLDSCLDIMIEIFNHELFGAIAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGK
DQVTKLILPLKEILQNTTSLKLARKVHETLRRIIAGLIVNQEMTAESILLLSYGLVSENL
PLLTEKEKNPGAPALDPRLPPQSCLLLPPTPVRGGQKAVVSRKTNMHIFIESGLRLLHLS
LKTSKIKSSSEPVLEMLDPFVSLLIDCLVSMDVKVITGALQCLIWVLRFPLPSIETKAEQ
LTKHLFLLLKDYAKLGAARGQNFHLVVNCFKCVTIVVKKVKSYQITEKQLQVLLAYAEED
IYDTSRQATAFGLLKAILSRKLLVPEIDDVMRKVSKLAISAQSEPVRVQCRQVFLKYILD
YPLGDKLRPNLEFMLAQLNYEHETGRESALEMISYLFDTFPQGLLHENCGMFFIPLCLMM
VNDDSAMCKKMASMTIKSLLSKINLEKKDWLFDMVTTWFGAKKSLNRQLAALICGLFVES
EGVSFERRLGTILPVIEKEIDPENFKDIIEETEEKAADRLLFSFLTLISKLIKECNIIQF
TKPSETLNKIWSYVHCHLRHPHSWVWLTAAQIFGLLFASCQPEELTRKWKSKTTKKKFSE
PVAVRFLTNDLEQKMKSISLASCHQLHSKFLDQSLGEQVVKNLLFVAKVLYLLESDSEDK
QGEIKEDMEEQPALGDGVAREKIRKRKSCADEEMDSDKEENKEAKEEHSKPATLLWLIQK
LSWIAKLEAAYSPRNPLKRTCIFKFLGAVAMDLGIDKVKPYLPVIIAPLFRELNSTYSDQ
DPLLKNLSQEIIELLKKLVGLESFSLAFASVQKQANEKRALRKKRKALEFVTNPDIAAKK
KLKKHKNKSEAKKRKIEFLRPGYKAKRQKSHSLKDLAILE
NT seq
8403 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaagcctatgtcccacaagacggagaacacgtacaggtttcttacatttgct
gaacgattggcgaatgtgaatattgatattattcaccggattgatagaactgcaagctat
gatgaggaagtcgaaacctacttttttgagggtctgctgaaatggagagaattgaacctt
acagaacactttggaaaattttacaaagaagttattgacaagtgccagtccttcaatcag
ttggtctatcatcaaaatgagatagttcagagtttgaagactcacctgcaaaccaagaac
agttttgcttatcagccccttttggatttggttgtacagttggcacgagatctgcagacg
gacttttatccacattttcaggattttttcctgaccatcacctcaatcctggagactcag
gacacagagttactagaatgggctttcacctcactgtcctatctttacaaatacctgtgg
agactgatggtgaaggacatgtccaatatatacagcatgtatagtacacttctggctcat
aaaaaactacatataagaaactttgctgctgaaagttttacttttttgatgagaaaggtt
tctgataaaaacgcacttttcaatttaatgtttcttgatcttgatgaacatccggaaaaa
gtagaaggagttggacagttgctctttgaaatgtgcaaaggagttagaaatatgtttcat
tcctgtacagggaaggcagtgaagctaattttgcaaaaactaggaccagttactgaaaca
gaaactcagctaccatggattttagttggagaaacactcaaaaacatggtcaaatccact
gtgtcctacatctacagggaacattttggtccactttttgaatgtttgcaagaatcactc
ctggatctacatagaaaagtaaccacaatgaactgtggggaaagttctgaacagataaga
aggttgttagaaacatatctaatacttgtgaaacatggaaatggatcaaagataaccaaa
cctgtcgatgtttgtgaggtattatgtcaaacaatacacatagccagtctttccacaact
tgccgggagaccctcttggctgtaatttctgctttgatcctgggtgaaaatgtttccttg
ccagacacctttattaaagaaaccatacagaaaatttttgagagtggatttgaaagacgt
ctaattttggatttttctgaagtcatgtttgttatgaagcagtttgagcagctttttcta
cccagctttctcttatacattgaaaattgcttcttgattgatgaggctgctgtcaaagat
gaagctctggccattttggccaagctcattctgaacaaagcagcacctcctactgctggc
tcgatggcaattgagaagtaccctctgcttttctcacaacagacggtgggatcctgtgta
aggcagaagaagactagatccaagggaggaaaagaacagatcccagtgctggaccacctc
ttatctctaattcagttacctgcaaataaagattctacttacctttcacattcttgggca
gcccttgttgtgttacctcacatcagacctcttgagaaagagaaggtgataccagttgtc
acatgcttcatagagtcactcttcatgaatgttgacagagagagttttgcaaaaggaaac
ttgtttgttctttgtcaagctgtaaatactatgttaagtttggaagaatcttctgaaatt
ctgcatttggttcctgtggaacgtgtgaagaatttagtattaacatttcctgtggagcca
tctgtgttgctgttagctgatctctattatcagagattatccttatgtggctgcaaaggg
ccactttctgaggaagctttaatggaattatttcccaggttacaagctaacatttcaact
ggcatatccaagattcggcttttgacaataaggatcctaaaccattttgagtttcgactt
ccagaactgatggaggatgatgggctctcagagcgtcagtctgccttggctatattacgc
caggcagaacttgttccagcaactgtgagtgattacagagagaagcttcttcatttgaga
aaactaagacatgatatggtgcaggctgcagtccctgacgggccattacaggaggtgcca
cttcgttatttattaagcatgttgtatgttaacttcagtgccctctgggatcctgttatt
gaactcataagttctcatgcacatgaaatggacaataagcaattttggaaagtctactat
gaacatctagaaaaagcagctctacatgctgagaaagagctgcaaaatgatgtaagagat
gagaagtccattggagatgaaagttgggagcagcctcaggaaggagatgttggggctctt
tatcatgagcagttagcatcaaaaactgactgtcaggaaagactggaccacaccaacttc
cgatttctgctctggcgagctctggcaaaattcccagagagggtagagccacggtccagg
gagctttccccacttttcctgagatttatccacaacgagtattacccagcagacctgcag
gccgctcccacccaggatctgcgcaggaaaggcaaaggggtggccgcggaggagactgaa
gaggaacccgatgctggagataacgaagagctggaagaagcggtgcccatggatgagccc
tcacagaagaaaaagaccagaagagctgcagcaaagcagttaattgctcatttgcaagtt
ttctcaaagttttcaaatccacgagccttatatctagaatccaaattatatgacctgtat
cttcagctgttgctacatcaggatcaaatggtgcagaaaataaccctggattgtataatg
acatataagcatccacatatcctcccttacagggaaaacttacaaagattgcttgaagac
cgaagctttaaggaagagatagtgcattttagcatttctgaagataatgcagtagtgaaa
acagcccaccgagcagatctgtttcccattctgatgaggattttgtatggccgaatgaaa
aataagactgggagtaaaactcaggggaaatctgcctcagggacccgcatgtccattgtt
ctgagattccttgctgggaccaaaccagaggagatcgagacattcttggacctgctattt
gaacctgtgaagcacttcaagaatggagaatgccattctgcagtcattcagtcagtagaa
gatttggatttgtctaaagttcttcctttaggtcgtcagcatggtatcttaaatagcctt
gaaatagtattgaagaacattagtcatctgatcagtgcctacttaccaaagattttgcag
atactgttgtgcatgacagcaacagtctcgcacatccttgaccaacgagaaaagatacag
ctcaggtttattaacccgctgaaaaatttaagacgtcttggaatcaaaatggtaactgac
atctttttggattgggagtcttaccaattcagaacagaagaaattgatgctgtatttcat
ggtgcggtttggccccagatcggaaggcttggatctgagagtccgtattctcccactcct
ctgctgaaactaattagtatctggagcagaaatgcaaggtatttccctttactggctaaa
cagaaacctgggcaccctgagtgtgatatcctgaccaacgtctttgcaattttgtcagcg
aagaatctctctgaagccacagcctctattgtgatggatatagctgatgaccttcttaac
cttccagattttgaacccacagaaacactttcgagcttgccggtgactggatgcgaatac
accgaaaggacagatgagtctatcacaatgggaggaagattaattctacctcatgtacct
gcaattctccaatatctcagcaaaaccacaataagtgcagaaaaggtgaaaaagaaaaag
aacagagcacaagtcagtaaggaacttggcattctgtcaaagatcagcaagttcataaaa
gacaaagaacaaagttctctgctcattacacttctcctccctttcctccaccgtggcaat
attgctcaggatacagaggttgatattttggtgacagtacaaaaccttttaaaacattgt
ctggagcctacaagcttcctcaagcctctagcaaaactcttctcagttattaagaataaa
ttgtcaagacagttgctttgtaaggttttccagactctttctgattttgagagtggatta
aaatacattactgatgttgtcaagcttaacgcctttgatcaaagacatcttgatagtatc
aactttgatgttcgcttctcagcattccagacaatcacctcttgtattaaagagatgcaa
actgtggatgttaactacttaattctagtcatgcataattgtttctataatctggagtta
ggagacatgtctttaagtgataatgccagcatatgcctgatgagtatcatcaagaaggta
gctgccttgaacgtcacagagaaagaatacagggaaatcattcatcgttcactcctggag
aaattgaggaaaggattgaagagccagacagagaatattcaacaggattataccacagtg
ctttcctgtttaattcaaacttttccaaatcaaccagaatttaaagagttggtacagctt
actgattgccatgatccagaaatggacttctttgagaatatgaaacacattcagatccac
agaagagcaagagccttgaagaaactggcaaaacagctaatggaaggcaaagttatgctg
tcttctaaatctctccagaattacatcatgccttatgccatgactccaatttttgatgag
aaaatgctcaagcatgaaaatataaccattgctgccacagaagttattggagctatttgc
aaacatctctcttggtcagcatatatatattacttgaaacatttcattcatgtcttacag
acaggacagatcaatcaaaagttgggtgtcagtttgctagtaatagtgttagaagcattc
cacttcgaccacaaaactcttgaagaacaaatgagaaaaattcagaatgaagaaagtgac
ttttgttgtttactaaacatagacacagtagaagtgattgagttgccagagaatgaaacc
atggaattagagcatatggatgaggaagagaaggaaaacaaatgtaagaatttgtcagac
aacaacaaagaaccgggaaaccccgatccagctgaatgtcaaggggcctcagctaaagaa
cctgagtgtgtcactgggtccatctctttccttcctcggaataaggaagaattggagaga
acaattaaaaatatccaaggaaccataactggggatatcctaccaaggctacataaatgc
ctggcctctacgactaaaagggaagaagaacacaagctcataaaatccaaggttgtgaat
gatgaggaagtagttcgagttcctttagcttttgccatggttaaactaatgcggtccctt
ccacaagaagttatggaagctaacctgccgagtattttgctgaaagtgtgtgccctcctc
aagaacagagcacaggaaatcagagacattgcacgcagcactctagcaaaaataatagaa
gatctgggtgtgcactacctacaatatattttaaaagaattacaaagtacccttgtccgt
ggatatcaggtccatgtgctgacttacactgtttatatgttgctgcaaggcctcaccaac
aagcttcaagttggggatttggactcctgtttagatataatgattgagatttttaaccat
gagttgtttggtgccattgctgaagagaaggaagtgaagcagatcctctccaaagtcatg
gaggcacgaagaagcaagagttacgattcttatgaaatcctgggcaagtttgtagggaaa
gatcaggttacaaaacttatccttccattaaaagagatcttacaaaataccacgagttta
aaactggcccggaaagttcatgaaaccttgcgccgaatcatagcaggattgattgtaaat
caagaaatgaccgcagaatccatactattgctcagttatgggttggtcagtgaaaatctt
cccctgttaacagaaaaagaaaaaaacccaggagcccctgcactggatccacgtctgcca
ccccagagctgtcttctgctccccccaactccagttcgaggtgggcagaaagctgttgtg
agcaggaaaaccaacatgcacatatttattgagtctggacttcggctgctacatctgagt
ctaaagacttccaagatcaagtcttcaagtgaacctgttctggaaatgttggatcctttt
gtctctctcctcatagactgcctggtttccatggatgtgaaggtgatcacaggtgcttta
cagtgcctgatctgggtcttgaggttccctctgccttccatagaaacaaaagcagaacag
ctgacaaaacacctcttcctattgctgaaggactatgcaaaacttggagctgccaggggc
cagaacttccacctggtggtaaattgtttcaagtgtgtgaccatagttgtgaagaaagtg
aagtcttaccagataaccgaaaagcagcttcaagttctactagcatatgctgaagaagac
atttatgatacttcaagacaggccactgcatttggtcttctgaaggccattttatcaagg
aagttgttagtcccagaaatcgatgatgtcatgcggaaagtatccaagttggcaatttct
gcacaaagtgaacctgtcagagtccaatgcagacaggtttttctgaaatatattcttgac
tatcccctgggtgacaaattgagaccaaacttggaattcatgcttgctcaactcaattat
gaacatgagaccgggagagagtctgccttggaaatgatctcctatctctttgacacattc
cctcagggactactccacgagaactgtggaatgttctttattcctctttgtctaatgatg
gtgaacgatgattctgccatgtgcaagaagatggcatccatgacaatcaaatctttactc
agtaaaatcaaccttgagaaaaaagattggctctttgatatggttaccacctggtttgga
gcaaaaaagagcttaaataggcaactagctgccctcatctgtggcttgtttgtggaaagt
gaaggagtctcttttgagagaagacttggaactattcttcctgtgattgaaaaggaaatt
gatcctgaaaactttaaagatatcatagaagagactgaagaaaaagctgcagatcgcctt
ctgtttagttttcttacactgattagtaaactcatcaaggaatgtaatattattcagttt
accaagccctccgagacgctgaataaaatctggagttatgttcattgtcacctgagacat
ccacacagctgggtgtggctcactgcagcccagatttttggattgctctttgcctcttgc
caaccagaggaacttactagaaaatggaagtctaaaacaactaaaaagaagttctcagaa
cctgtagcagtaagatttctaacaaatgaccttgaacaaaagatgaaaagtatctcccta
gcctcttgccatcagttgcattccaagttcttagatcaatctctaggagaacaggttgtt
aagaatttgttatttgtagccaaagtcttatatttactggaatctgattctgaggataag
caaggtgagataaaagaagacatggaagaacaaccagctttaggagatggtgtagccaga
gagaaaataagaaaacgcaagtcctgtgcagatgaggagatggactctgacaaagaagaa
aacaaggaggcaaaggaagagcacagcaagccagccacactgctgtggttgatccagaag
ttgtcctggattgcaaaactggaagctgcctactcacctagaaaccccttaaagagaaca
tgcatctttaagtttcttggagctgtggcaatggatcttggaatagacaaggtgaagccg
tatctcccagtgatcatagctcctttgttccgagaactgaacagcacctattcagaccag
gatcctctgctgaagaatctatcgcaggaaatcatagaattactcaaaaagctggttggg
cttgagagcttctccttagcttttgcctctgtacagaaacaggctaatgagaaaagggca
ctccggaaaaagaggaaggctttagagttcgtaactaatcctgatattgctgccaagaaa
aagctgaagaaacacaaaaataaaagtgaagccaagaagagaaagatagagttcctgcgt
ccaggctataaggccaagagacaaaagagccacagcctgaaagatttagcaatattggag
taa
DBGET
integrated database retrieval system
