Leopardus geoffroyi (Geoffroy's cat): 123591909
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Entry
123591909 CDS
T10761
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04110
Cell cycle
lgf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123591909 (SMC1B)
04114 Oocyte meiosis
123591909 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123591909 (SMC1B)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123591909 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
123591909 (SMC1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
ATG16
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
123591909
NCBI-ProteinID:
XP_045322485
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All DBs
Position
B4:complement(138333287..138420554)
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AA seq
1235 aa
AA seq
DB search
MGRLEVLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIYGAHIGKPVSSFASVKIVYVEESGEEKTFTRIIRGGCSEFHFDDNPVSRSAYIAE
LEKIGVMVKARNCLVFQGTVESISLKKPKERTQFFEEISTSGELIGEYEEKKRKLLKAEE
DAQFNFNKKKNVAAERKQAKLEKEEAERYQSLLEELKINKVQLQLFKLYHNERKIHFLNT
ELERVNRNLSVTKESLSDHENIVKAKKKEHGMLTRKLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQVEEEILY
KRRDIELEASQLDRYKELKEQVRKKVAIMTQQLEKLQWEQKADKERLAFEKRRHGEVQEN
LKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVVEIENTKSRMSEVNEELNLI
RSELQNAGIDYHEGKRQQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKT
PFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKEIKNLRDRRTQLIQELKDLMKILRKEADLKQIQTLVQGTRTRLKYSQSELE
MIKKKQLAAFYREQSQLQSELLNIESQCAMLSEGVRERQQRIEEFQEEIDKVEDDIFQHF
CEEIGVENIREFEKKHVKQQQEIDQKRLEFEKQKTRLNIQLEYSRNQLKKKLNKIRTLEE
TIEKGREDIDNLKKAEETCLQIVDELMVKRQQLKDVFVTQNANTEKVQAQLEEERKKVLA
IDREAGKWQKEVVIIQTSLEQKRLEKHNMLLDCKVQDLEIILLLGSLDDIVEVELGTEAE
STQATSDIYEKEAAIEVDYSSLQEDLKALQTDKEVEARLRLLLQQVASQEEVLLKTAAPN
LRALENLKTVRDKFQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSQCFEHVSVSIDQI
YKKLCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEEFYSQADALIGIY
PEFDDCMFSRVLTLDLSQYPDTEGQESSKRNQESR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtttggaggtgttgctcgtggagaactttaagtcgtggcggggccgccaggtc
atcggccccttcaggaggttcacctgcatcatcggccccaacggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagagaaaacagctaatttaagagtgaaaaat
attcaagaactcatttacggagcacatattggaaaacctgtctcttcttttgcgagtgta
aaaattgtgtacgtggaggaaagtggagaggagaaaacatttacaaggattatccgaggg
ggatgctcagaatttcattttgatgataatccagtgagtcgttctgcttacatagccgag
ttggaaaagataggcgtaatggtcaaagcacggaactgtctcgtttttcagggaactgtg
gagtcgatttcattgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcact
tcaggagagctcataggagaatatgaggaaaagaaaagaaagttactgaaagctgaagag
gatgcacagtttaattttaataagaaaaaaaatgtggcggcagagcgcaaacaggcaaag
ttagagaaagaagaggcagaacgttaccagagtctccttgaagaactgaaaataaacaaa
gtacagttacagcttttcaaactatatcataatgaaaggaaaattcattttctgaacact
gagttagagcgtgtgaacaggaatttgagtgtcacaaaagagtctctttctgatcatgaa
aacatagttaaagccaagaaaaaggaacatggaatgctaactagaaaactacaacaaaca
gaaaaagagttaaaatctcttgaagcacttttaaatcagaaaaggcctcaatacattaaa
gccaaagaaaatacttctcaccacctcaagaaattagatgtggctaagaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaagatgatataaaggccctggagacagagctg
gttgatttagatggtgcatggagaagttttgagaagcaggttgaggaagaaatcttatac
aaaaggcgagacattgaactagaagccagtcagctggatcgttataaagaacttaaggaa
caagtaagaaagaaagtggctataatgacccaacaactggaaaagctgcagtgggaacag
aaggctgacaaagaaagactggcattcgagaagaggaggcatggagaagttcaggaaaat
ctaaaacaaataaaagagcagatagaagatcataaaaaacgaatagagaagttggaagaa
tatacaaaaacatgcatggattgcttgaaagagaaaaaacagcaagaggaaaccctagtg
gttgaaattgaaaacacaaaatcaagaatgtctgaagttaatgaagaattgaaccttatt
agaagtgaattgcagaatgctggaattgattaccatgagggaaaacgtcagcagaagaga
gcagaagttctagaacaccttaaaagactttacccagattctgtgtttggaagactgctt
gacctctgccaccctattcataagaaataccaactggctgttactaaactttttggtcgc
tacatggttgccattgttgtagcctctgaaaaggtagcaaaagactgtattcgatttctg
aaggaggaaagagctgaaccggagacattccttgctctcgattaccttgatatcaagcca
atcaatgaaagactgagggagattaaaggctgtaaaatgatgattgatgtcataaagact
ccgtttcctcagctgaagaaagtaattcagttcgtgtgtggaaatggccttgtctgtgag
actgtggaggaagcaaggcatattgcattcggtggacctgaaagacggaaaacagtagct
cttgatggaacattatttttaaaatctggggtgatctctggaggatcaagtgacttaaaa
tacaaggctagatgctgggatgagaaggagataaagaacttaagagacagaagaacccag
ctgatccaggaattaaaggatctaatgaagatacttcgcaaggaagctgacttgaaacaa
atacagactctagtacaaggaactcgtacacgactcaaatattcccagagtgaactagag
atgattaaaaagaagcaacttgctgctttttaccgggagcaatctcagctacagagtgag
ctgctgaacattgagtctcaatgtgccatgttgagtgaaggtgtgagagaacggcaacaa
cgaatcgaagagtttcaagaggagatagacaaggtcgaagatgatattttccaacacttc
tgtgaagaaattggtgtggaaaatattcgtgaatttgagaagaaacatgttaaacagcaa
caagaaattgatcaaaaaagattagaatttgagaaacagaaaactcggcttaatattcaa
cttgaatatagtcgcaatcagctgaagaagaagctgaataagatccgtacattagaagaa
accatcgaaaaaggcagagaagacatcgataacctaaagaaggctgaagaaacttgtctg
caaattgtggatgaactcatggtgaagcggcagcaacttaaggacgtatttgtcactcag
aatgccaacacggagaaggtccaagctcagcttgaagaagaacggaagaaagttctggct
attgatagggaagcgggaaaatggcaaaaagaagttgtcatcattcagacttctttggaa
cagaaacggctagaaaagcacaatatgctgcttgactgcaaagttcaagaccttgaaata
attcttttgttgggatcgctggacgacatcgttgaagtggagttgggaactgaagcagaa
agtacccaggcaacaagtgacatctatgaaaaagaagcagccattgaggtagactacagc
tccctacaagaggatttgaaggctctacaaacggataaagaagtggaggcccgcctcaga
ctcctgctgcagcaggtggcgtcccaggaggaggtcctgttgaagacggcggccccaaac
ctgagagccctggagaacctgaagaccgtcagggacaagttccaggagtccacagacgct
tttgaggccagcagaaaggaagccagaatgtgtaggcaagagtttgaacaggtgaaaaaa
aggagatacgaccttttcagccagtgttttgagcacgtctcagtctccattgatcaaatc
tacaagaagctctgcagaaacgtcagcgcccaagcatttcttagcccagaaaacccagaa
gagccttacctagagggaatcagctataactgcgtggctccaggcaaacggttcatgcca
atggacaatctgtcggggggagaaaagtgtgtggcggctttggccctcctgttcgcggtg
cacagttttcggcccgctccgttctttgtcttagatgaagtggacgcagccctggacaac
acgaacattggcaaagtctcaagttacatcaaagagcagactcaggagcagtttcagatg
ataatcatttccctaaaagaggagttctattcccaggccgatgcgctgataggcatctac
ccggagttcgacgactgcatgttcagcagagttctgaccctggatctttcccagtatcca
gacactgaaggccaagaaagcagcaaaagaaaccaagagtcgcgttag
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