Leopardus geoffroyi (Geoffroy's cat): 123591989
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Entry
123591989 CDS
T10761
Symbol
CALCOCO1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgf03021
]
123591989 (CALCOCO1)
04131 Membrane trafficking [BR:
lgf04131
]
123591989 (CALCOCO1)
Transcription machinery [BR:
lgf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
123591989 (CALCOCO1)
Membrane trafficking [BR:
lgf04131
]
Autophagy
ER-phagy
ER-phagy recepters
123591989 (CALCOCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
APG6_N
ACBP4_C
CC4_CEP85
Fez1
Crescentin
Vps23_core
Pox_A8
DUF724
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
123591989
NCBI-ProteinID:
XP_045322722
LinkDB
All DBs
Position
B4:complement(80465087..80483446)
Genome browser
AA seq
715 aa
AA seq
DB search
MEESSLSRAPSRGGVNFLNVARTYIPNTKVECHYTLPPGAVPSASDWIGIFKVEAACVRD
YHTFVWSSVPDSATDGSPVHASVQFQASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFRE
PRPMDELVTLEEADGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEGQVTELRSQ
VQELETALATARQEHAELMEQYKGLSRSHGELTEERDILSRQQGDHVARILELEDDIQAI
SEKVLTKEVELDRVRDTVKALTREQEKLLGQLKEAQADKEQSEAELQVAQQENRRLNLEL
QEAKGRQEEQSAQAQRLKDKVAQMKDTLGQAQQRVAELEPLKEQLRGAQELAASSQQKAT
LLGEELASTAGARDRTMAELHRSRLEVAGVNGRLAELSLHLKEEKSQWSKERAGLLQSME
AEKDKILKLSAEILRLEKAVQEEKTQNQVFKTELAREKDSSLVQLSESKRELTELRSALR
VLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWNEDAVTEDEEAAVGPSCPAALTDSE
DESPEDMRVPPYGLCERGDTGSSPAGPRESSPLVVISQPAPIAPHLSGPAEESSSDSEAE
DEKSVLMAAVQSGGEEAHLLLPELGNAFYDVASTIFRGAQIALHPLSPAPPPSPTTSGFA
VGPLSEASTGGPATPPWKECPICKERFPAESDKDALEDHMDGHFFFSTQDPFTFE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatcatcactaagccgggcaccttcccggggtggagtcaactttctgaatgta
gcccggacctacatccccaacaccaaggtggaatgtcactatacccttcccccaggcgcc
gtgcccagcgccagcgactggattggcatcttcaaggtggaggctgcctgtgttcgggat
taccacacttttgtgtggtcttcggtgcctgacagtgcaactgatggttcccctgtccac
gccagtgtccagttccaagccagctacctgcccaaacctggagcccagctctaccagttc
cggtatgtgaaccgccagggccgggtatgtgggcagagcccccctttccagttccgagag
ccaaggcccatggacgaactggtgaccctagaggaggccgatggcggctctgacatcctg
ctggtcgtccccaaggccactgtgctgcagaaccagctggatgagagccagcaagagaga
aatgacctgatgcagctgaagctgcagctggagggacaggtgacggagctgaggagtcaa
gtacaggagctcgagacggctctggcaacagccaggcaggagcatgcggagctgatggag
cagtacaaggggctttcccggtcccacggggagctcacagaagagagggacatcctgagc
cggcaacagggagaccatgtggcacgcatcctggagctagaagatgacatccaggccatc
agtgagaaagtgctgacaaaggaggtggagctggacagggtgagagacaccgtgaaggcc
ctgactcgggaacaggagaagcttcttggtcaactgaaagaagcgcaggccgacaaggag
cagagcgaggctgagctccaagtggcacaacaggagaaccgccgcttaaatctggagctg
caggaagcaaagggccggcaggaggagcagagtgcccaggcccagcgactgaaggacaag
gtggcccagatgaaggacaccctaggccaggcccagcagcgtgtggctgagctggagccc
ctaaaggagcagcttcgaggagcccaggagctcgcagcctcaagccagcagaaagccacc
cttcttggggaggagttggccagcacagcgggagccagggaccgcaccatggcggagcta
caccgcagccgcctggaagtggctggagtcaatggcaggctggctgagctcagcctgcac
ctgaaggaggaaaaaagccaatggagcaaggagcgggcggggctgctgcagagtatggag
gcagagaaagataagatcctgaagctaagtgcagagatacttcgactggaaaaggcagtt
caggaggagaagacccagaatcaagtgttcaagactgaactagcccgggaaaaggattct
agcctggtacagttgtcggagagcaagcgggagctcacagagctgcggtcagccctgcgc
gtgctccagaaggagaaggaacagttgcaggaggagaagcaggaactgctagagtacatg
agaaagctggaggcccgcctggagaaggtggcagacgagaagtggaacgaggatgctgtc
acagaggacgaggaggcggctgtgggcccgagctgcccagcggctctgacagactcagag
gacgagtccccagaagacatgagggtccctccctatggcctgtgtgagcgtggagacaca
ggctcttctcctgctgggccacgagagtcttctcccctggtcgtcatcagccagccggct
cccatcgctccccacctctcagggccagctgaagagagtagctctgactcggaggccgag
gatgagaagtcagtcctcatggcagctgttcagagtggaggtgaggaggcccacctgctg
cttcctgagctgggcaatgccttctatgacgtggccagcaccatcttccgtggagcccaa
attgccctgcatcccctctctcctgcccctcccccttccccaaccaccagtggctttgca
gtgggtcccttgtcagaggccagcaccgggggccctgccacccccccgtggaaggagtgc
cctatttgtaaggagcgctttccggctgagagtgataaggatgccctggaggaccacatg
gatggacacttctttttcagcacccaggacccctttacctttgagtga
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