Leopardus geoffroyi (Geoffroy's cat): 123592139
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Entry
123592139 CDS
T10761
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
123592139 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123592139 (YBX3)
03041 Spliceosome [BR:
lgf03041
]
123592139 (YBX3)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
123592139 (YBX3)
Spliceosome [BR:
lgf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123592139 (YBX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Herpes_LMP1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
123592139
NCBI-ProteinID:
XP_045323059
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All DBs
Position
B4:complement(45082745..45109643)
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AA seq
371 aa
AA seq
DB search
MSEAGEATTTTSTSTTLPQAPAEAAAAAPQDPAPKSPVGSGAPQAAAPAPAALVAGNPGG
DAAPAATGTAAPASSAPAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVH
QTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRR
GYYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDGQFSGARSQLRRPQYRPQYRRRFPPY
HVGQTFDRRSRVFPHPNRMQAGEIGEMKEGVPEGTQLQGPVHRNPTYRPRYRRGPPRPRP
APAVGEAEDKENQQAANGSNQPSARRGYRRPYNYRRRPRPPNAPSQDGKETKAGEAPSEN
PAPATEQSSAE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgggcgaggccaccaccaccacctccaccagcaccaccctcccgcaggct
ccggcggaggcggccgccgcggccccccaggaccccgcgcccaagagcccggtgggcagc
ggcgcgccccaggccgcggccccggcgcccgccgccctcgtcgcaggaaaccccggtggg
gacgcggcccccgcagccacgggcaccgcggcccccgcctcttcagcccccgccggcagt
gaagacgcggagaaaaaagttctcgccaccaaagtccttggcactgttaaatggttcaac
gtcagaaatggatatggattcataaatcgaaatgacaccaaagaagatgtgtttgtacat
cagactgccatcaagaagaacaacccacggaagtacctgcgcagtgtaggagatggagaa
actgtagagtttgatgtggttgagggggagaagggtgcagaagcagccaatgtgactgga
ccggatggcgttcccgtggaagggagccgttacgctgctgatcggcgccgttaccgacgt
ggctactatggcagacgccgtgggcctccccgtaattacgctggggaggaggaggaggaa
gggagcggcagcagtgaaggatttgacccccctgccactgacgggcagttctctggggcc
cggagtcagctgcgccgcccccagtatcgccctcagtaccggaggcggttcccgccttac
cacgtgggacagacctttgaccgtcgctcacgggtctttccccatcccaacagaatgcag
gctggtgaaattggagagatgaaggagggagtcccagagggaacacaacttcagggaccg
gttcatcgaaacccaacttaccgcccaaggtaccggagaggccctcctcgcccccgacct
gccccagctgttggagaggctgaagataaagagaaccaacaagcggccaatggttcaaac
cagccatctgctcgccgtggataccggcgcccatacaactacaggcgtcgcccccgtcct
cctaatgctccttcacaagatggcaaagagaccaaggcaggcgaagcgccatctgagaac
cccgctccagccaccgagcagagcagtgccgagtaa
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