Leopardus geoffroyi (Geoffroy's cat): 123592931
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Entry
123592931 CDS
T10761
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf02010
ABC transporters
lgf04148
Efferocytosis
lgf04975
Fat digestion and absorption
lgf04979
Cholesterol metabolism
lgf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123592931 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123592931 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
123592931 (ABCA1)
04979 Cholesterol metabolism
123592931 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123592931 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgf02000
]
123592931 (ABCA1)
Transporters [BR:
lgf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
123592931 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
GCIP_N
Motif
Other DBs
NCBI-GeneID:
123592931
NCBI-ProteinID:
XP_045324321
LinkDB
All DBs
Position
D4:complement(66418343..66551634)
Genome browser
AA seq
2263 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQKDT
SMKDMHQVLRTLQQIENYNSSLKLQDFLVDNETFSGFLTYNLSLPRPTVDKMLGADVSLH
KVFLQGYQLHLTNLCSGSKLEEVIQLGDQEVSTLCGLPREKLDAAEQVLRSNMDILKPIL
TELNYTSPVLSKELTKATKTLLDSLGTLAQELFSMSSWSDMRQEVMFLTSVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAGTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLIGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PKIWTFMESNPEMDLVRTLLDSRSNDHFWEQQLDGLDWTARDILAFLAKHPEDVQSANGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPIATEVRLINKSMELLDERKFWAGIVFTG
ITPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTERKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTTSVSMMLFDTFIYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGISEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRFEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKVVPELPPAGQSGGRGGEVQRLVALTQDVSAISNLIRKHVAEARLVE
DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRAFGDKQSCLRPFTEDDVIDPNDSDVDPESRETDLLSGMDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDMGTQELLNALTRNPGFGTRCMEGNPIPDMPCSVGEEEWTT
APVPQTITKLFQSGNWTMENPSPACQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAIKQV
KKHLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVMNNAILRANL
QKGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIRPRPVNARLPPLNDEDEDVKRERQRILDGGGQNDILEIKELT
KIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSIL
SNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcttactggccacagttgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcccctatttatcttcctgatcctgatc
tctgttcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataaccct
tgtttccgttatccgactcctggtgaggcccctggagttgttggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcagcggcttcttttatacagtcagaaagacacc
agcatgaaggacatgcaccaagttctaaggacattacagcagattgagaattacaactca
agcttgaagcttcaggatttcctagtggacaatgaaaccttctctggattcctgacttac
aacctctctctgccaaggcctactgtggacaaaatgctgggggctgatgtcagtctccac
aaggtatttttgcaaggctaccagttacatttgaccaatctgtgcagtggatcaaaatta
gaagaggtgattcaacttggtgaccaagaagtttccacgctgtgcggcttgccaagggag
aaactggatgcagcagagcaggtacttcgttccaacatggacatcctgaagccgatcctg
acagaactaaactatacatctcctgtcctgagcaaggaactgactaaggccacaaaaact
ttgctggatagtcttgggactctggcccaagagctgttcagcatgagcagctggagtgac
atgcggcaggaggtgatgttcctgaccagtgtgaacagctccagctcctccacccagatc
taccaggctgtgtcccgcattgtgtgtggccatccagagggtgggggcctgaagatcaag
tccctcaactggtacgaggacaacaactacaaagccctctttggaggcaacggcactgag
gaagatgctggcaccttttatgacaattctacaaccccttattgcaatgatttgatgaag
aatctggagtccagtcctctttcccgcatcatatggaaagctctaaagcctctgcttatt
gggaagatcctatatacacctgacactccagccacaaggcaggtgatggctgaggtgaat
aagacctttcaggaactggctgtgtttcatgatttggaaggcatgtgggaagagctcagc
cctaagatctggaccttcatggagagtaacccagaaatggaccttgttcggacactgttg
gacagcagaagcaatgaccacttttgggaacagcaattagatggcttagattggaccgct
agagacatcctggcatttttggccaagcacccagaggatgtccagtctgctaatggctct
gtatacacctggagagaagccttcaatgagaccaaccaggcaattcagaccatctctcgt
ttcatggagtgtgtcaacctgaacaagctcgaaccgatagcaacagaagtccggctcatc
aacaagtccatggagctgctggatgagaggaagttctgggctgggatcgtgttcaccgga
atcactcctggcagtgttgagctgccccatcatgtcaagtacaagatccgaatggacatc
gacaatgtggagaggacaaataaaatcaaagatgggtactgggacccgggtcctcgggct
gacccctttgaggatatgcggtacgtctgggggggctttgcctacttgcaagatgtggtg
gaacaggcaatcatcagggtgctgactggcactgagaggaaaactggtgtttatgtgcag
cagatgccctacccctgttatgtcgatgacatcttcctgcgggtgatgagccggtcgatg
cctctgttcatgacgctggcctggatctactccgtggctgtgatcatcaagggcatcgtg
tatgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaatggcatc
ctctggttcagctggttcatcagcagcctcattcctctgctcgtgagcgccggcctgctg
gtggtcatcctaaaattaggaaacctgctgccctacagcgaccccagcgtggtgtttgtc
tttctgtccgtgtttgctgtggtgaccatcctgcagtgcttcctgatcagcacactcttc
tccagagccaacctggcggcagcctgcgggggcatcatctacttcatgctctacctgccc
tatgtcctgtgcgtggcgtggcaagactatgtgggcttcacgctcaagatcttcgtgagc
ctgctgtctcctgtggcttttgggtttggctgtgaatacttcgccctttttgaggagcag
ggcattggggtgcagtgggacaacctatttgagagccccatggaggaagatggcttcaac
ctcaccacgtcagtctccatgatgctgtttgacacctttatctatggagtgatgacgtgg
tacatcgaggctgtctttccaggccagtatggaatacccaggccctggtattttccttgc
accaaatcctactggttcggtgaggaaagcgatgagaagagccaccctggttccagccag
aagggaatatcagaaatttgcatggaggaggaacccacacacctgaagctgggcgtgtcc
attcagaacttgatgaaggtttaccgagatggcatgaaggtggctgttgatggcctggcc
ttgaatttctatgagggccagattacctccttcctgggccacaatggagctgggaagacc
accaccatgtcaatcctgacggggttgttccctcccacctcgggcactgcttacatcctg
gggaaagacattcgctttgagatgagcaccatccggcagaacctgggggtctgtccccag
cacaatgtgctgtttgacatgctgactgtggaagaacacatctggttctatgcacgtcta
aaggggctctcagagaagcatgtgaaagcagagatggagcaaatggccctggatgttggt
ttgcctcccagtaaactgaaaagcaaaacgagtcagctctcaggtggaatgaagagaaag
ctgtctgtggctttggcctttgttgggggatccaaggttgtcattctggatgagcccaca
gctggcgtggacccttactcccgcaggggaatatgggagctactgctgaaatatcgacaa
ggccggaccattattctttccacacaccacatggatgaagcagacatcctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctccctgtttctcaagaac
cagctgggaacaggctactacctgaccctggtcaagaaagatgtggaatcctccctcagt
tcctgcagaaatagcagtagcactgtgtcatacctgaagaaggtggtgcctgagcttccc
ccagctgggcagagtggaggcagaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtatccgctatctccaacctcatcaggaagcatgtggctgaggcccggctagtggaa
gacattgggcatgagctgacttatgtgctgccctatgaagctgcaaaagagggggccttt
gtggaactcttccatgagattgatgaccggctctcagacctgggcatctctagttatggc
atctcagagactacgctggaagaaatatttctcaaagtggctgaagagagtggggtggac
gctgagacttcagatggcaccttgccagcaagacgaaacagacgggcctttggggacaag
caaagctgtcttcgcccattcactgaagatgatgtcattgatcctaatgattctgatgta
gacccagaatccagagagacagacctgctcagcgggatggacggcaaaggctcctaccag
gtgaagggctggaaactcacacagcagcagtttgtggcccttctgtggaagaggctgctg
attgccagacggagtcggaagggattctttgctcagattgtcctgccagctgtgtttgtc
tgcattgccctggtgttcagcttgatcgtgccaccctttggcaagtaccccagcctggag
cttcagccctggatgtacaacgaacagtacacatttgtcagtaatgatgctcctgaggac
atgggcacccaggaactcttgaatgccctcaccagaaaccctggcttcgggacccgatgt
atggaaggaaacccaatcccagacatgccttgctcagtgggggaagaggagtggaccacc
gccccggttccccagaccatcacgaaactcttccaaagtgggaactggacgatggagaac
ccctcacccgcctgccagtgtagcagcgacaaaatcaagaagatgctgcctgtgtgtccc
ctgggggcaggggggctgcctcctccacaaaggaaacagaacactgcagacatccttcag
aacctgacgggaagaaacatttcggattatcttgtgaagacctatgtgcagatcatagcc
aaaagtttaaagaacaagatctgggtgaatgagtttaggtatggagggttttccctgggt
gccagtaattctcattcacttccttcaagtcaagaagttaataatgccatcaagcaagtg
aagaaacacttgaagctggccaaggacagttctgcagatcgatttctcagcagcttggga
agattcatgacaggactagacacgaaaaataacgtcaaggtgtggttcaacaacaagggc
tggcatgccatcagctctttcttgaatgtcatgaacaatgccatcctccgagccaacctg
cagaagggagagaaccccagccagtatgggattaccgctttcaatcaccctctgaatctc
actaagcagcagctctcagaagtggctctgatgactacatcagtggatgtccttgtgtcc
atctgtgtcatctttgcaatgtccttcgtcccggccagctttgtggtgttcctgatccaa
gagcgggtcagcaaagcaaaacacctgcagttcatcagtggagtgaagcctgtcatctat
tggctctccaattttgtgtgggatatgtgcaactatgtggtccctgccacgctggtcatt
atcatcttcatctgcttccagcagaagtcttacgtgtcctctaccaacctgcctgtgcta
gcccttctacttttgctgtatgggtggtcgatcacacctctcatgtacccagcctccttc
gtgttcaagatccccagcacagcctacgtggtcctcaccagcgtgaacctcttcattggg
atcaacggcagcgtggccacttttgtgctggagctattcaccaacaataaactaaataac
atcaatgatatcctgaagtctgtattcttgattttcccacatttttgcctgggacggggg
ctcatcgacatggtgaaaaatcaggcaatggctgatgccctggaaaggtttggggagaat
cgttttgtttcaccactgtcttgggacttagtgggacgaaacctcttcgccatggctgtg
gaaggggtggtattcttcctcatcactgttctgatccagtacagattcttcatcaggccc
agacctgtaaatgcaaggcttcctccgttgaatgatgaggatgaagatgtgaagcgggaa
agacagagaattcttgatggtggaggacagaatgacatcttggaaatcaaggagctgaca
aagatctacagaagaaagaggaagcccgctgttgacaggatttgcgttggcattcctcct
ggcgagtgctttggacttctgggagttaatggggctgggaaatcatcaactttcaagatg
ttaactggagataccacggttaccagaggagatgctttccttaacaaaaatagtatctta
tcaaacatccacgaagtgcatcagaacatgggctattgccctcagtttgatgccatcacg
gagttactgactggaagagagcacgtggagttctttgccctcttgagaggagtcccagag
aaagaagttgggaaggttggtgaatgggcaattcgaaaactgggcctggtgaagtatgga
gaaaaatatgctggtaactatagtggaggcaacaaacggaagctctcaacagccatggct
ttgattggcgggcctcctgtagtgtttctggatgaacctaccacaggcatggatcccaaa
gcccggagattcctatggaattgtgccttaagtattgtcaaggaagggagatcagtagtg
cttacatctcatagtatggaagaatgtgaagcgctgtgcactaggatggcaattatggtg
aatgggaggttccggtgtcttggcagtgtccagcatctgaaaaataggtttggagatggt
tatacaatagttgtacgaatagcagggtccaaccctgatctgaagcctgtccaggagttc
tttggacttgcctttccaggaagtgttctcaaagagaagcaccggaacatgctccagtac
cagcttccgtcctcattatcttccctggctaggatattcagcatcctttcccagagcaaa
aagcgactccacatagaagactactctgtttctcagacaacacttgaccaagtatttgta
aatttcgccaaggaccaaagtgatgatgaccacttaaaggacttgtcattacacaaaaac
cagacagtagtggatgttgcagttctcacatcttttctccaggatgagaaagtgaaagaa
agttatgtatga
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integrated database retrieval system
