Leopardus geoffroyi (Geoffroy's cat): 123592957
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Entry
123592957 CDS
T10761
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03013
Nucleocytoplasmic transport
lgf03015
mRNA surveillance pathway
lgf03040
Spliceosome
lgf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123592957 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
123592957 (NCBP1)
03015 mRNA surveillance pathway
123592957 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123592957 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123592957 (NCBP1)
03041 Spliceosome [BR:
lgf03041
]
123592957 (NCBP1)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
123592957 (NCBP1)
Spliceosome [BR:
lgf03041
]
Common components
Common spliceosomal components
Cap binding complex
123592957 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
123592957
NCBI-ProteinID:
XP_045324359
LinkDB
All DBs
Position
D4:60305031..60343313
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AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcggcggcacagcgacgagaacgacgggggacagcctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctctggagagcaacctagaaggcttggcaggtgttttagaggctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagctgacaatttatacaacattagttggactgctgaatgccaggaattacaacttc
ggtggagagtttgtagaagctatgattcgtcaacttaaagaatcattgaaagcaaacaat
tacaatgaagctgtatatctggtccgttttttatctgatcttgtgaattgtcatgtcatt
gctgccccatccatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtacctcaggtgcggcgggattggtatgtgtatgcatttctgtcctctttgccctgggtt
ggaaaggagttgtatgaaaagaaagacgcagagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccagaagactcatgtgcccatgttacaagtatggactgctgag
aaaccgcatccgcaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgttggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagccctgcagcacaacctgcctcctttcacaccaccgcctcacacggaagattcg
gtgtacccgatgccaagggtcatcttcagaatgtttgattacacggatgaccccgagggt
cctgtaatgccagggagccattcagttgaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccactggaaggaaaggaagacttgtgctgcacagctggtgagctatcca
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
cagctcccggcaccccctcacattgatgtgatgtataccacactgctcatcgagctgtgc
aagcttcagcctggttcgctaccccaagttcttgcacaggctactgaaatgttatacatg
cgtttggacacgatgaatactacgtgtgtagacaggtttattaattggttttcccatcat
ctgagtaacttccagttccgttggagctgggaagattggtcagattgtcttactcaagat
cctgaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccaccagcgtatattagatattgttcctcctaccttctcagctctatgccctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattcagtt
gccctctgtttagctgttgcatttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagatgtaccaaatcctaaccaggatgatgatgacgatgaaggattcagctttaac
ccattgaaaatagaggtctttgtacagactctgctacacttggcagccaaatcattcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgagagtgat
gaaggaaagctacatgtcctacgagttatgtttgaggtctggaggaaccatccacagatg
attgctgtgctagtagataagatgatccgtacacaaattgttgactgtgccgcagtggca
aattggatcttctcttcagaactctctcgagactttactagattgtttgtttgggaaatc
ttgcactccacaattcgtaagatgaacaaacatgttctgaaaatccagaaagagctggaa
gaagcaaaagaaaaactcgcaaggcaacacaaacggcgaagtgacgatgacgacagaagc
agtgacaggaaagatggggctctagaggagcaaatagaaagactgcaggaaaaagtggaa
tctgctcagagtgaacagaagaatctcttcctcgttatatttcagcgttttatcatgatc
ttgaccgagcacttagtacgatgtgaaaccgatgggaccagtgtattaacaccatggtat
aaaaactgtatagagaggctccagcagatcttcttacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcaccgccgaattagaccctcatatcctggct
gtgttccagcaattctgtgccctacaggcctaa
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