Leopardus geoffroyi (Geoffroy's cat): 123593342
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Entry
123593342 CDS
T10761
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04151
PI3K-Akt signaling pathway
lgf04510
Focal adhesion
lgf04512
ECM-receptor interaction
lgf04518
Integrin signaling
lgf05165
Human papillomavirus infection
lgf05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123593342 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123593342 (TNC)
04518 Integrin signaling
123593342 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123593342 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123593342 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123593342 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lgf00536
]
123593342 (TNC)
Glycosaminoglycan binding proteins [BR:
lgf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123593342 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Fn3_VIN3
NDNF
DUF7949
DUF4998
fn3_2
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
123593342
NCBI-ProteinID:
XP_045324987
LinkDB
All DBs
Position
D4:complement(75045824..75141266)
Genome browser
AA seq
2292 aa
AA seq
DB search
MGAMVMLAGIFLALLTLTTEGGVLKKVIRHKRQSGVNVTVPEEHQPVVFNHVYNIKLPVG
SQCSVDLEPASGEKDLAPPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELENMVSSLREQCTTGAGCCLQPAEGRLDTRPFCSGHGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCLDGQCVCDEGFTGEDCSQLACPSDCNDQGKCVSGVCVCFE
GYTGADCSQEVCPVPCSEEHGRCVDGRCVCRDGFAGHDCNEPLCLNNCYDRGRCVENECV
CDEGFTGEDCSELICPNDCFDRGRCVNGTCYCEQGFAGEDCGQLSCPNACSGRGRCEQGQ
CVCEPGFAGADCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELRCPNGCSGHGRCVN
GQCVCDEGHTGEDCGQLRCPNDCHSRGRCVQGKCVCEQGFQGYDCSEMSCPNDCHRHGRC
VNGMCVCDDGYTGEDCRDLRCPGDCSNRGRCVDGRCECEHGFTGPDCAELACPGDCHGQG
RCVNGQCVCREGFMGTACKERRCPGDCHGRGRCEDGQCVCQEGFEGPDCGRRSCPNDCSG
WGQCVEGHCICSEGHAGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTH
EDGLEMQFRVPGDQTSATIRELEPGVEYFIRVFAILENKKSIPVSARVATYLPAPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKDDEGEITKSLRRPETTYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKRVTTTRLDAPGQIEVKDVTDTTALITWFKPLAEIDGIELSYGIK
DVPGDRTTIDLTHDENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLDAPRNLR
RVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVEVPRSQQTTTKTTLTGLRPGTE
YGIGVSAVKADKESDPATINAATDMDAPKDLRVSETTETNLTLLWRKPSAKFDHYRLNYS
LPSGQPVEVQLPRDATSHVLRGLEPGQEYTILLTAEKGRHKSKPARVKASTDHAPELENL
TVTKVGWDGLRLNWTAADRAYEHFVIQVQEANRMEAAQNLTVPGSLRAVDVPGLKANTPY
RVTIYGVIRGYRTPVLSAEASTGETPHLGEIMVSEVGWDALKLSWTAPEGAYEQFFIQVQ
ETDTVEAARNFTVPGGLRSVDLPGLKAATNYNITIRGVTQEFSTTPLSVEVLTEEVPDLG
NLTVTEVRWDGLSLDWTAPEGLYEQFVIAVREADQAEEAHSLTVPGSLRSVEVPGLRAST
PYTVTLRGKVRGRGTRPVVVEAITEELPQLADIAVTEAGWDGLRLNWTTTDQAYEHFVIQ
VQEANWVETAQNLTVPGSLRAVDVPGLKANTPYRVTIYGVIRGYRTPVLSAETSTAAEPE
IGNLTVSDITPESFNLSWTATDGAFETFTIEIVDSNRFLETMEYNISGAERTAHISGLHP
NNHFIVYLSGLAPSIRTQTISATATTVAEALLSHLTISNVTWASMALSWKAQEAAFDSFL
IEVRNSDHGQETVVRSVPAASRSSVITNLTASSNYTAHLHGLMGRHRAHTLMAQATTEAL
PLLENLTISDINPYGFTVSWMASENAFDSFLVAVVDSGKLLDPQEFTLSGTQRKLELRGL
ITGIGYEVMVSGFTQGHQTTPLRAEIVTEAEPEVDHLLVSDATPDGFRLSWTADDGVFDS
FVLKIRDTKKQSEPMEITLLAPERTRDITGLREATEYEIELYGISSGRRSQPVSAIATTA
MGSPKEISFSDITENSATVSWMAPSAQVESFRITYVPVGGGTPSVVTVDGTKTQTRLAKL
LPGAEYLVSVIAVKGFEESEPVSGSFTTALDGPSGLVTANITDSEALAMWQPAIAPVDSY
VISYTGERVPEITRTVSGNTVEYALTDLEPATEYVLRIFAEKGPQKSSVITTKFTTDLDS
PRDLTATDVQSETALLTWRPPRASVTGYLLVYESVDGTVKEVIVGPETTSYSLAELSPST
HYTAKIQALNGPLRSKLVQTIFTTIGLLYPFPKDCSQAMLNGDTTSGLYTIYLNGDKAQA
LEVFCDMTSDGGGWIVFLRRKNGREDFYRNWKAYAAGFGDRREEFWLGLDNLHKITAQGQ
YELRVDLRDHGKTAYAVYDRFSVGDAKTRYKLKVEGYSGTAGDSMAYHNGRSFSTYDKDT
DSAITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPS
NFRNLEGRRKRA
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atgggggccatggtgatgttggcgggcatcttcttagctttgcttaccctcactactgaa
ggtggggtcctcaagaaggtcatccggcacaagcgacagagtggggtgaatgtcactgtg
cccgaggaacaccagccagtggtgtttaaccatgtctacaacatcaagctgccagtaggt
tcccagtgctcagtggatctggaacccgctagtggggagaaagacctggccccaccacca
tcagagcccagtgaaagcttccaggagcacacagtagacggggaaaatcagatcgtcttc
acacaccgcatcaacatcccccggcgggcctgtggctgtgccgcggctcctgatgtcaag
gagctcctgagcagactggaggagctggagaatatggtgtcttccctgcgggagcagtgc
accacgggagcaggctgctgtctccagcccgctgaaggccgcctggacaccaggcccttc
tgcagtggccacgggaactttagcacggaaggatgcggctgtgtttgtgaacccggctgg
aaaggccccaactgctctgagcctgaatgcccaggcaactgtcacctgcggggccagtgc
cttgacgggcagtgcgtctgcgacgagggcttcactggggaggactgcagccagctggcc
tgccccagtgactgcaacgaccagggcaagtgcgtgagtggggtctgcgtgtgtttcgaa
ggctacacgggggccgactgcagccaggaggtgtgcccggtgccgtgcagcgaggagcac
ggcaggtgcgtggacggccggtgcgtgtgccgggacggctttgcgggccacgactgcaac
gagcccctgtgcctcaacaactgctacgaccgcggcaggtgcgtggagaacgagtgcgtc
tgcgacgagggcttcacgggtgaggactgcagcgagctcatctgccccaacgactgcttc
gaccggggccgctgtgtcaacgggacctgctactgcgagcagggcttcgcgggcgaggac
tgcggccagctcagctgcccgaacgcctgctcgggccggggccggtgcgagcagggccag
tgcgtgtgcgagccgggcttcgccggggccgactgcagcgagaagaggtgtcccgccgac
tgtcacaaccgcggccgctgcgtcgacgggaggtgtgagtgtgacgacggtttcacgggc
gcagactgcggcgagctcaggtgtcccaatggctgtagcggccacggccgctgcgtcaac
gggcagtgcgtgtgcgacgagggccacacaggggaggactgcggccagctgcggtgcccc
aacgactgtcacagccggggccgctgcgtgcagggcaagtgtgtgtgcgagcagggcttc
cagggctatgactgcagtgagatgagctgccccaacgactgccaccggcacggccgctgc
gtgaacggcatgtgcgtctgtgatgacggctacacaggcgaagactgccgcgacctgcgg
tgccccggggactgcagcaaccggggccgctgtgtggacgggcggtgcgagtgtgagcac
ggcttcacgggccccgactgcgcagagctcgcatgcccgggcgactgccacggccaaggc
cgctgcgtgaacgggcagtgcgtgtgccgtgaaggcttcatgggcacagcctgcaaggag
cggaggtgtcccggagactgtcacggccggggccgctgcgaggacggtcagtgcgtctgc
caggagggcttcgagggcccggactgtgggcgtcgctcctgccccaacgactgcagtggc
tgggggcagtgcgtggagggccactgcatctgcagcgagggccatgccggggaggactgc
tcggaggtgtcccctcccaaagacctcgttgtgacagaagtgacagaagagaccgtgaac
ctggcttgggacaatgagatgcgggtcaccgagtacctcgtcgtgtacacacccacccac
gaggatggcctggaaatgcagttccgggtgcccggggaccagacatccgccaccatccgg
gagttggagcctggtgtggagtactttatccgcgtgttcgccatcctggaaaacaagaag
agcattcccgtcagtgccagggtggccacttacttgcctgcacctgaaggcctcaagttc
aagtccatcaaggagacatctgtggaggtggagtgggatcctctggacatcgcttttgag
acgtgggagatcatcttccggaatatgaataaagatgatgagggagagatcaccaaaagc
ctgaggagaccagagaccacatacaggcaaactggcctagctcctgggcaagagtatgag
atctctctgcacatcgtgaaaaacaatacccggggcccaggcctgaagagggtgaccact
acccgcttggatgcccccggccagatagaggtgaaagatgtcacagacaccactgctctg
atcacttggttcaagcccctggccgaaattgacggcatcgagctctcctacggaatcaaa
gacgtgcccggcgaccgcaccaccatcgatctcacacatgatgagaaccagtattccatc
gggaacctgaagccggacactgagtatgaggtgtccctcatctcccgcaggggcgacatg
tccagcaaccctgccaaagagaccttcacgacaggcctggatgctcccaggaatctccgt
cgcgtctcccagacagacaacagcatcaccctggagtggaggaatggcaaggcagccatt
gacagttacagaattaagtatgcgcccatctccggaggtgaccatgctgaggtggaagtg
ccaaggagccagcaaaccacaaccaaaaccacgctcacaggtctgaggccgggaactgaa
tatgggatcggagtgtctgccgtgaaggccgacaaggagagcgatccggccaccatcaat
gcggccacagacatggatgcacccaaggacctccgggtttctgaaaccacggagaccaac
ctgaccctgctctggaggaagccttcggccaagtttgaccactaccgcctcaactacagc
cttccctcaggacagccggtggaggtgcagcttccgagagatgccacctcccacgtgctg
agaggcctggaacccgggcaggaatataccatcctcctcacagccgagaagggcaggcac
aagagcaagccggcgcgagtgaaggcgtccacagaccatgcccctgaactggaaaacctc
acggtgaccaaggttggctgggatggcctcagactcaactggaccgcagctgaccgggcc
tatgagcactttgtcattcaggtgcaggaggccaacaggatggaggcagctcagaacctc
acggtgcccggcagcctgcgggctgtggacgtcccgggcctcaaggccaacaccccttat
agagtcaccatctatggggtgatccggggctatagaacaccagtgctctctgctgaggcc
tccacaggggaaactccccatttgggagagatcatggtgtccgaggtgggctgggatgcc
ctcaaactcagctggactgctccggaaggagcctatgaacagtttttcattcaggtgcag
gagactgatacagtagaggcagcccggaacttcacagtccccggaggactgaggtccgtg
gacctgcctgggctcaaagcagccactaattataacatcaccatccgtggggtcacgcag
gaattcagcacgactcctctctctgttgaagtcttgacagaggaggttccagatctggga
aacctcacagtgaccgaggttcgctgggatggcctcagcctggactggacggcccctgag
gggctctatgagcagtttgtcattgcagtccgggaggctgaccaggccgaggaagctcac
agtctcacggttcctggcagtctacgctccgtggaagtcccaggcctccgggccagtacc
ccttacacggtcaccctgcgtggcaaggtcaggggccgcggcactcgacctgttgttgtg
gaggccatcacagaggagctcccccagctggcggacatagctgtgactgaggctggctgg
gatggcctcagactcaactggaccacaactgatcaggcctatgagcactttgtcattcag
gtgcaggaggccaactgggtggagacagctcagaacctcacggtgcccggcagcctgcgg
gctgtggatgtcccgggcctcaaggccaacaccccttatagagtcaccatctatggggtg
atccggggctatagaacaccagtgctctctgctgagacctccacagctgcagaacctgaa
attggaaacttaactgtttctgacataactcctgagagcttcaatctctcctggacagcc
accgatggggccttcgagacctttaccattgaaattgttgattccaataggtttttggag
acgatggaatataatatctctggtgctgaacgaactgcccacatctcagggctacaccct
aataatcattttattgtctacctctcgggacttgctcccagcatccggacccaaaccatc
agtgctacggccaccacagtggcggaagctctccttagccacctcactatctcaaatgtg
acctgggccagtatggccctctcgtggaaagcccaagaggctgcctttgatagctttctt
atcgaagttaggaattctgaccacggccaggagacggtagtgcgttctgtacctgcggcg
tctcgcagctcagtcatcaccaacctcacggcttcttctaattacactgcacaccttcat
gggctgatgggcaggcaccgcgctcacactctaatggcccaagcaaccacagaggccctg
ccccttctggaaaacctaaccatttccgacattaatccctacgggttcacagtttcctgg
atggcatcggagaatgcctttgacagcttcctagtagcggtggtggattctgggaagctg
ctggacccccaggaattcacactttcaggaacccagaggaagttggagctcagaggcctc
ataactggaattggttatgaggtcatggtctctggcttcacccaagggcaccaaaccacg
cccttgagggctgagattgttacagaagccgagccagaagttgaccaccttctggtttca
gatgccaccccagacggtttccgtctgtcctggacagctgatgacggggtcttcgacagt
tttgttctcaaaatcagagataccaaaaaacagtctgagccaatggaaataaccctactt
gcccccgaacgaaccagggacataactggcctcagagaggccactgagtacgaaattgaa
ctctatggaataagcagtggaaggcgatcccaaccagtcagtgctatagcaacaacagcc
atgggctctcctaaggaaatcagtttctcagacatcactgaaaactcagccactgtcagc
tggatggcgccctctgcccaggtggagagcttccggatcacctatgtccctgttggagga
gggacaccctcagtggtaactgtggacggaaccaagactcagaccagactggcgaagctc
ttgcctggagcagaatacctcgtcagcgtcatcgccgtgaagggctttgaggaaagtgaa
cccgtctcaggatcgttcaccacagccctggatggcccatctggcctggtgacagccaac
atcactgactcagaagccttggccatgtggcagccagccattgcccctgtggacagttac
gtcatctcctacacaggggagagagtgccagaaattacacgcacggtgtccgggaacaca
gtggagtatgctctgaccgacctcgagcctgccacggaatatgtgctgagaatctttgca
gagaaagggcctcagaagagttcagtcatcactaccaagttcacaacagaccttgattct
ccaagagacttgactgctactgacgttcagtcggaaactgctctcctcacctggagaccc
cccagggcatctgtcaccggttacctattggtgtatgaatctgtggatggtacagtcaag
gaagtcattgtgggtccagaaaccacctcctatagcctggcagagctgagcccatccacc
cactacacagccaagatccaggcattgaatgggcccctgaggagcaagctggtccagacc
atctttaccacgattggactcctgtacccattccccaaggactgctcccaagcaatgctg
aatggagacacgacctctggcctctacaccatttatctgaatggtgataaggcccaggct
ctggaagtcttctgtgacatgacctctgatgggggtggatggatcgtgttcctgagacgc
aagaatggacgtgaggatttctatcgcaactggaaagcctacgctgctgggtttggggac
cgcagagaagaattctggcttgggctggacaatctacacaaaatcacagcccaagggcag
tacgagctccgggtggacctccgcgaccacgggaagaccgcctacgccgtctacgacagg
ttcagcgtgggagatgccaagactcgctacaagctgaaagtggaagggtacagcgggacc
gcgggtgactccatggcttaccacaacggcagatccttctccacctatgacaaggacacg
gactcagccattaccaactgtgccctgtcctacaagggggctttctggtacaagaactgt
caccgtgtcaacctgatggggagatatggggacaacaaccacagtcagggtgttaactgg
ttccactggaagggccacgaatattcaatccagtttgctgagatgaagttgagacccagc
aatttccgaaaccttgaaggcaggcgcaaacgggcgtaa
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integrated database retrieval system
