Leopardus geoffroyi (Geoffroy's cat): 123593519
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Entry
123593519 CDS
T10761
Symbol
WHRN
Name
(RefSeq) LOW QUALITY PROTEIN: whirlin
KO
K21879
whirlin
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lgf03037
]
123593519 (WHRN)
Cilium and associated proteins [BR:
lgf03037
]
Primary cilia and associated proteins
USH complex and associated proteins
123593519 (WHRN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
T15H9-4_C
HHD_RTEL1
USH1C_N
CCM2_C
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
123593519
NCBI-ProteinID:
XP_045325441
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All DBs
Position
D4:complement(74553055..74649570)
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AA seq
907 aa
AA seq
DB search
MNAQLDGLSVSSSSTGSLGSAAGAGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFTH
CLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPATT
PYRQPAWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKE
GLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDPQ
GRSISPPSGLPQTHGSTLRQCEGDSRSTLNLLQGGDEKKVNLVLGDGRSLGLTIRGGAEY
GLGIYVTGVDPGSEAESSGLKVGDQILEVNGRSFLNVLHDEAVRLLKSSQHLILTVKDVG
RLPHARTTVDETKWIASSRIGXTTTNSAGFPGDLTTEGTNKLGFYKGPAGSQVTLSSLGN
QTRLLLEEQARHLLNEQERATMAYYLEEYRGGSVSVEALVMALFELLNTHAKFSLLSEVR
GTISPQDLDRFDHLVLRREIESMKARQPPGPGAGDTYSTVSYSDTGSSTGSHGTSTTVSS
ARNTLDLEETGEAVQGNMSTLPDVSLDDVKATSEGLPVYKPPPPPPPLAQGHSRPPEQQR
KPGKEGLQPPSSASSHSGTVFSAPRNHSPPAGTAPAPGASSAQDSPSSPIYASVSPANPG
SKRPLDARLALVNQHPIGPFPRVQSPPHLKSPPAEATLAGGCLPPPSPSGRPDVTGTNQH
FVMVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAGEAEASAPGRGR
QMASAKSRSSKEPPRNERTTEGATKPPGLLEPTSTLIRVKKSAATLGIAIEGGANTRQPL
PRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKERDYIDFLV
TEFNVML
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcagctggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcg
gcggccggggcgggcggcggcgggggcgcggggctgcggctgctgtctgccaacgtgcgc
cagctgcaccaggcgctgacggcgctgctgagcgaggcggagcgggagcagttcacgcac
tgcctgaacgcgtaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgcgtg
ctgctggacagcccggtcaagcggcgcctgctgcccatgctgcgtctggtcatcccgcgc
tccgaccagctgctcttcgaccagtacacggccgagggcctctacctgcccgccaccacc
ccctaccggcagcctgcctggggcggccccgacggcgcggggccgggggaggtgcgcctg
gtgagcctgaggcgcgccaaggcccacgagggcttgggcttcagcatccgcgggggctcg
gagcatggcgtgggcatctatgtgtcgctggtggagccaggctctctggccgagaaggaa
gggctgcgagtcggggaccagattctgcgtgtcaacgacaaatcccttgcccgggtgacc
cacgctgaggctgtcaaggctctgaagggctccaagaagctggtgctgtctgtgtactca
gcggggcgcatccccgggggctatgtcaccaaccacatctacacctgggtggacccccag
ggccgcagcatctccccgccctcaggcctgccccagacccacggcagcaccctgaggcag
tgcgagggtgactcgaggagcaccctgaacctcctgcaaggcggggatgagaaaaaggtg
aacctggtgctgggggacggccggtccctgggcctcaccatccgagggggagccgagtac
ggcctgggcatttatgtcacgggcgtggacccgggctcagaagcagaaagcagcggactt
aaggttggggaccagattctggaggtcaacgggcggagctttctcaacgtcctgcatgac
gaggcggtcaggctgctcaagtcatcccagcacctgatcctgacggtgaaggacgtcggg
aggctgccccatgcccgcaccactgtggatgagaccaagtggattgccagttcccggatt
gggnacaccaccacgaactcagcagggtttcctggggatcttacaacggaagggacaaac
aagctgggattttacaagggcccggctggctcccaggtgaccctgagcagcctgggcaac
cagacgcgcctgctgctggaggagcaggcacggcacctgctgaatgagcaggagcgagcc
accatggcctactacctggaggagtaccgtggcggcagtgtctccgtggaagccctggtc
atggccctgttcgagctgctcaacacgcacgccaagttctcgctcctgtccgaggtgaga
ggcaccatctccccccaagacctggaccgcttcgaccacctggtgctgaggcgggagatc
gagtccatgaaggcacggcagcccccgggccctggggccggggacacctactccacggtc
tcctacagcgacacgggctcatccacaggcagccacggcacctccaccactgtcagctcg
gccaggaacactctggacctggaggaaactggtgaggctgtccagggcaatatgagcacc
ctcccagatgtttccctggatgatgtcaaagccacctccgaggggctgcctgtctacaag
ccgccgcctcccccaccccctctagcccaaggccacagccgcccgcctgagcagcagagg
aagccagggaaggagggcctccagccaccttcctcggcgtcttcccactcaggcaccgtc
ttctcggcccctcggaaccacagcccgccagcgggcactgcccctgccccgggggcctcc
tcagcacaagactcgccctcctcccccatctatgcctcggtctcccctgccaaccctggc
tccaagaggccgctggacgcccgcctggccctggtcaaccagcaccccatcggccccttc
ccgcgagtccagtcaccgccgcacctgaagagcccccccgcggaggccacgctggcaggg
ggctgtctcccgccaccctccccctccggccggccagacgtgacgggcacgaaccagcac
tttgtcatggtggaggtgcaccggccggacagcgagccggacgtgaacgaagtgagggcg
ctgccccagacgcgcacagcctccacactgtcccagctctcggacagtgggcagaccctg
agcgaggacagtggcgtggatgctggcgaggcagaggccagcgccccgggccgaggcaga
cagatggcatctgccaagagcaggagtagcaaggagccgcctcggaatgagaggaccaca
gagggggccaccaaaccgcccggactcctggagcccacgtctaccctgatccgcgtgaag
aaaagcgcagccaccctgggcatcgccatcgagggcggtgccaacacccgccagcccctg
cctaggatcgtcacaattcagcgaggtggttcagcccacaactgtgggcagctcaaggtg
ggccatgtgatcctggaggtgaacgggctgacgcttcggggcaaggaacatcgagaggcc
gcgcgcatcatcgccgaggcctttaagaccaaggagcgggactacatcgactttctggtc
accgagttcaatgtgatgctctag
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