Leopardus geoffroyi (Geoffroy's cat): 123593546
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Entry
123593546 CDS
T10761
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgf03400
]
123593546 (SMC5)
DNA repair and recombination proteins [BR:
lgf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
123593546 (SMC5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_13
AAA_21
CEP135_TSGA10_CC
AAA_29
FtsK_SpoIIIE
AAA_25
Motif
Other DBs
NCBI-GeneID:
123593546
NCBI-ProteinID:
XP_045325547
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All DBs
Position
D4:12798570..12894244
Genome browser
AA seq
1104 aa
AA seq
DB search
MATPSRKTSTPSSLASKRALPRDPSSEVPSKRKSSAPPAPPPLPLQSSRPFVEGSIVRIV
MENFLTYDVCEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRG
CSKGMVEIELFRNSGNLTITREIDVAKNQSSWFINKKPTTQKVVEEQVAALNIQVGNLCQ
FLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYLE
KMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEVKLARDRVKEEVR
KLKEGQIPMTRRIEEIERQRHSLEARIKEKATDIKETSQKCKQKQDIIERKDKQIEELQQ
ALTVKQNEEHDRQRRISNTRKMIEDLQNELKTAENCENLQPQIDAITNDLRRIQDEKVSC
EGEVIDKRGEKETLEKEKKSVGDNIVRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRDKF
KQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAFVFESQEDMEVFLKEIRDNKKLRVNA
VIAPKSSYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSFLCCHYHIHEVPVGTERTR
EKIERVIQETRLKQMYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEE
QLKEINRKLQAVEAGLIALYERNKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLGS
LKMMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNFVKICTSLHIQKVDLILQNTTV
ISEKNKLESDYMAASSQLRLTEQHFIELDESRQRLLQKCKELMKRARQVCNLGAEQTVPQ
EYQTQVPTIPNGHNSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPTVVEEYTKRE
EEIEQLTEELKIKKVELDKYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVD
LHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRV
VDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHM
LEPNRWNLKAFQRRRRRITFTQPQ
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgagtaggaagacgtcgaccccaagctccctggcctccaagagagctctc
ccgagagacccctcgtcggaggtcccgagcaaaagaaagagctcggccccgccggcgccg
ccgccactgccgctgcagtcgtccaggcctttcgtggaaggctcgatcgtccgtatcgtg
atggagaacttcttgacgtatgatgtctgtgaagtatctcccggacctcacttgaatatg
attattggagctaatgggacaggaaagtcgagcatcgtgtgtgccatttgtcttgggttg
gcaggcaaacccgctttcatgggacgggcagacaaggttggcttttttgtgaagagagga
tgttccaaaggaatggttgaaattgaattgttcagaaattctggaaatcttaccatcacc
cgtgaaattgacgtggcaaaaaatcagtcatcttggttcatcaacaaaaaacctacaacc
cagaaagtggtggaagagcaagttgcagccttaaatattcaagtgggcaatctttgccaa
tttctacctcaggataaagttggagaatttgctaaactgagtaaaattgaactccttgaa
gctactgagaagtccattggacctccagaaatgcacagataccactgtgaactcaaaaac
ttcagggagaaagaaaaacaactagagacctcgtgcaaagagaaaactgaatatctagag
aaaatgattcagaggaatgaaagatataaacaagatgtggagagattctatgaacgtaag
cgacatttagatttgatcgagatgcttgaagcgaaaagaccatgggtggaatatgaaaat
gtccgtcaggagtatgaagaagtaaagctagctcgagaccgagtgaaggaagaggtcaga
aaacttaaagaagggcagatccctatgacacgtcgaattgaagaaattgagaggcagcgt
cacagtttggaggctcgaatcaaagagaaggcaacagatattaaagagacatctcaaaaa
tgcaaacaaaagcaagatattatagaaaggaaagataaacagattgaggaactgcagcag
gctttaacagtaaaacagaatgaagaacacgatcgccagaggaggataagtaacactcgg
aagatgatcgaagatttgcaaaatgaactgaagaccgcagaaaactgtgagaatcttcag
ccccaaattgatgccatcacaaatgatttgagacgaattcaagatgaaaaggtatcatgt
gaaggcgaggtgatcgataagcgaggagagaaggaaaccctagagaaggagaaaaagagc
gtgggtgataatattgtacgatttgacaatctcatgaatcaaaaggaagataagctgaga
cagagataccgtgacacatatgatgctgttttatggctaagaaataaccgggacaaattt
aagcaaagggtctgtgaacctataatgctcacgatcaatatgaaagataataaaaatgcc
aaatatattgaaaatcatatttcatcaaatgacttaagagcttttgtatttgaaagtcaa
gaagatatggaagttttcctcaaagagattcgtgacaataaaaaattaagagtaaatgct
gttattgctcccaagagttcatatgcagacaaagccccttcaagatctctgaatgacctc
aaacagtatgggtttttctcttacttgcgagagttatttgatgcacctgatcccgtcatg
agctttctttgctgccattatcatattcatgaagttcctgtaggaactgaaaggaccaga
gaaaaaattgaacgggtaatacaagaaacccggttaaaacaaatgtacacagcagaagaa
aagtacgtagtgaaaacttccttttattcaaacaaagttatttctagcaacacatccctg
aaagtagcccagtttctcacagtcaccgtggacctagagcaaagaagacacttagaagaa
cagctaaaggaaattaatagaaaactgcaagccgtggaagcagggctgattgccctgtat
gagagaaacaagcatctagaacacaaagacaatgaacttagacagaagaagaaggagctt
cttgaaaggaaaaccaagaaaagacaactggagcaaaaaattagttccaaactaggaagt
ttaaagatgatggaacaggatacttgcaaccttgaggaggaagagcgaaaagcaagtacc
aaaatcaaggaaatcaatgttcaaaaagcaaaacttgttactgaattaacaaactttgta
aagatttgtacttctttgcatatacaaaaagttgatttaattcttcaaaatactacagtg
atctctgagaagaacaaattagaatcagattacatggctgcttcatcacagctccgtctc
acagagcaacatttcattgagctggatgaaagcagacagagattactgcagaaatgcaag
gagctgatgaagagagctaggcaagtatgtaacctgggcgcagagcagacggttcctcaa
gaataccagacacaagtacccaccattccaaatggacacaactcctcaccccccatggct
ttccaggatcttccaaacacgttggatgaaattgatgctttattaactgaagaaagatca
agagcttcttgcttcacaggactgaatcccacagtcgttgaggaatacacaaaaagagaa
gaagaaatagagcaattaaccgaggaactaaagataaagaaagttgaactggataaatac
agggaaaacatttcacaggtaaaagaaaggtggcttaatcctttaaaagagctcgtagaa
aaaattaatgaaaaattcagcaatttttttagttccatgcagtgtgctggtgaagttgat
ctgcatacagaaaatgaggaggactatgataagtacggcatccggattcgagtcaagttc
cgcagcagcacgcagctgcatgagttaactccacaccaccagagcgggggtgaaagaagc
gtgtccactatgttgtacttgatggcccttcaggaactcaatcgatgtccgttcagagta
gttgatgagatcaatcagggaatggacccgatcaatgaacggagagtgtttgaaatggtt
gtaaatactgcttgtaaagaaaatacatctcagtacttctttattacaccaaagctcctg
cagaatcttccttattctgaaaagatgactgtgttgtttgtctacaacggtcctcatatg
ttggaacctaacaggtggaacctaaaggctttccagaggcggcggcggcgcatcacgttc
actcaaccgcagtga
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