Leopardus geoffroyi (Geoffroy's cat): 123593593
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Entry
123593593 CDS
T10761
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgf02000
]
123593593 (TMC1)
03037 Cilium and associated proteins [BR:
lgf03037
]
123593593 (TMC1)
Transporters [BR:
lgf02000
]
Other transporters
Pores ion channels [TC:
1
]
123593593 (TMC1)
Cilium and associated proteins [BR:
lgf03037
]
Other cilia and associated proteins
Stereociliary proteins
123593593 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Toddler
Motif
Other DBs
NCBI-GeneID:
123593593
NCBI-ProteinID:
XP_045325647
LinkDB
All DBs
Position
D4:14919820..15114669
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AA seq
854 aa
AA seq
DB search
MHIWFSIPAMQTGLMTLPCWQWKSDHHQKAMTEVPSAAHSSSDVNVAASLIHCLKFQGVG
TATKHTELETLLYTRYLALPPKQHVPMLQSYSHAVLFLETDETSEDVQIQVEEKEDDTEE
SSSEEEEEEEDKLPRRESLRPKRKRKRDVIHEDDPEPEPEDEETRKAREKERRRRLKRGA
EEEEEIDEEELERLKAELDEKRQMIATVKCKPWKMEKKIEVLKEAKKFVSENEGALGKGK
GKRWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQFGSSVASYFLFLRWMYGV
NMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVLYDFNGLAQYSILFYG
YYDNKRTIGWMNFRLPLSYFLVGIMSIGYSFLVVLKAMTKNIGDDGGGDDNTFNFSWKVF
TSWDYLIGNPETADNKFNSITMNFKEAIIEERAAQVEENVHLIRFLRFLANFFVFLTLGG
SGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIA
LKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANITLWEANMIKAYNASLSGNS
TGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILVGDFLRACFVRFCNYCWC
WDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILRLHTSMYFQCWAVMC
CNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVIG
ETLEHDFPSWMAKILRQLSNPGLVIAVVLVMALTIYYLNATAKGQKAANLDLKKKMKQVG
YNLFYKNIIFINVK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcacatctggttttcaatacctgccatgcagacgggactgatgaccctgccgtgctgg
cagtggaaaagtgaccaccaccagaaagcgatgacagaagtgccgtcagcagctcacagt
tcctcggatgtcaatgttgccgcctccctcatccattgcctgaagtttcagggggtaggc
acagcaacaaaacatacagagttagaaaccctgctctacacccggtacctggctctgcct
ccgaagcagcacgtgcctatgctccaatcctacagtcacgcagttctgtttctggaaacg
gatgagaccagtgaagacgtacaaattcaagtggaggaaaaagaagatgacactgaggaa
agctcaagcgaagaggaagaggaggaggaagataaattacctcgaagagagagcttgaga
ccaaagaggaaacgaaaaagagatgttatccatgaggatgacccggaacctgaaccagag
gatgaagaaacaaggaaggccagagagaaggagagaaggaggaggctgaagaggggggcg
gaagaagaagaagaaattgatgaggaggaattggaaagactgaaggcagagttagatgag
aaaagacaaatgattgctactgtcaaatgcaaaccttggaaaatggagaagaaaattgaa
gttctcaaggaagcaaaaaaatttgtgagtgaaaatgaaggagcccttgggaaaggaaaa
ggaaagcggtggtttgcgtttaagatgatgatggctaagaaatgggcgaaatttcttcgt
gattttgaaaacttcaaagctgcttgtgtcccgtgggaaaacaaaatcaaagcaattgaa
agtcagtttggctcatcggtggcctcatacttcctcttcttgagatggatgtatggagta
aatatggttctctttatcttgacattcagcctcatcatgttgccagagtacctctggggt
ttgccatatggcagtttacctaggaaaacagttcccagagctgaagaggcatctgcggca
aacttcggtgtgttgtacgacttcaacggcttggcgcaatattccatcctcttttatggc
tattatgacaataaacgaacaattggatggatgaatttcaggctgccgctctcctatttt
ctggtggggatcatgagcattggatacagctttctggttgtccttaaagcgatgaccaaa
aacatcggggacgatgggggtggtgatgacaacaccttcaacttcagctggaaggtattc
accagctgggactacctgattggcaatccagaaacagcagacaacaaattcaattccatc
accatgaactttaaggaagctatcatagaggagagagcagcccaagtagaagaaaacgtc
cacttgatcagattcctgaggtttcttgctaacttcttcgtgtttctaacacttggaggg
agtggatacctcatcttttgggctgtgaagcgatcccaggaatttgcacagcaagatcct
gacacccttgggtggtgggaaaagaatgaaatgaacatggtcatgtccctcctggggatg
ttctgtccaaccctgtttgacttatttgctgaactggaagactaccatcctctcattgct
ctcaaatggctactgggacgcatttttgctctactcttaggcaacttgtatgtatttatt
cttgccttgatggatgagattaacaacaagattgaagaagagaagctggtaaaggccaat
attaccctctgggaagccaacatgatcaaggcctataatgcatcactctctggaaatagc
actggaccaccttttttcgtgcaccctgcagatgtacctcgaggaccctgctgggaaaca
atggtgggacaggaatttgtgcggctgaccgtttctgatgttctgaccacttatgtcaca
atcctcgttggggactttctcagggcatgttttgtgaggttttgcaattactgttggtgc
tgggatttggaatatggatatccttcatacactgaatttgacatcagcggcaatgtcctc
gctctgatcttcaaccaaggcatgatctggatgggctccttcttcgcccccagcctccca
ggcatcaatatccttcgactccacacttccatgtacttccagtgctgggccgtgatgtgc
tgcaacgttcccgaggccagggtcttcaaagcttccagatcgaataatttctacctgggc
atgctattgctcattctcttcctgtccaccatgcctgtcctgtacatgatcgtatccctc
ccgccatcttttgattgtggccccttcagtggcaaaaataggatgttcgaagtcattgga
gaaacactggagcatgatttcccaagctggatggcaaagatcttgagacagctctctaac
cctggactggttatcgctgtcgttttggttatggctttgaccatctattatctcaatgct
actgccaagggccagaaggcagcaaatctggatctaaagaagaagatgaaacaggtagga
tacaatttattttataaaaatatcatatttattaatgtcaagtag
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