KEGG   Leopardus geoffroyi (Geoffroy's cat): 123593597
Entry
123593597         CDS       T10761                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03320  PPAR signaling pathway
lgf04148  Efferocytosis
lgf04151  PI3K-Akt signaling pathway
lgf04659  Th17 cell differentiation
lgf04919  Thyroid hormone signaling pathway
lgf04920  Adipocytokine signaling pathway
lgf04928  Parathyroid hormone synthesis, secretion and action
lgf04932  Non-alcoholic fatty liver disease
lgf04976  Bile secretion
lgf05160  Hepatitis C
lgf05200  Pathways in cancer
lgf05202  Transcriptional misregulation in cancer
lgf05207  Chemical carcinogenesis - receptor activation
lgf05216  Thyroid cancer
lgf05222  Small cell lung cancer
lgf05223  Non-small cell lung cancer
lgf05226  Gastric cancer
lgf05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    123593597 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    123593597 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    123593597 (RXRA)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    123593597 (RXRA)
   03320 PPAR signaling pathway
    123593597 (RXRA)
   04919 Thyroid hormone signaling pathway
    123593597 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    123593597 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    123593597 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    123593597 (RXRA)
   05202 Transcriptional misregulation in cancer
    123593597 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    123593597 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    123593597 (RXRA)
   05216 Thyroid cancer
    123593597 (RXRA)
   05222 Small cell lung cancer
    123593597 (RXRA)
   05223 Non-small cell lung cancer
    123593597 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    123593597 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    123593597 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    123593597 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lgf03000]
    123593597 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:lgf03310]
    123593597 (RXRA)
Transcription factors [BR:lgf03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    123593597 (RXRA)
Nuclear receptors [BR:lgf03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   123593597 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 123593597
NCBI-ProteinID: XP_045325650
LinkDB
Position
D4:91698916..91795001
AA seq 476 aa
MTHAGPPRVTPAQSSGSWDFSTQVNSSSLNSPTGRGSMAAPSLHPSLGPGIGSSLGSPGQ
LHSPISTLSPPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTSSPQLSSPMNPVSSSED
IKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKD
LTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSA
NEDMPVEKILEAELAVEPKTETYVDANMGLNPNSPNDPVTNICQAADKQLFTLVEWAKRI
PHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIF
DRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKH
KYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgacccatgctggcccaccgcgtgttacaccagctcagagctctggttcctgggatttc
tccacccaggtgaactcctcttccctcaactcccccacggggcgtggctccatggccgcc
ccctcgctgcacccctctctggggcccggcatcggctcctcgctcggctcccccggccag
ctgcactcgcccatcagcaccctgagcccgcccatcaacggcatgggcccaccattctcg
gtcatcagctcccccatgggcccccactccatgtcagtgcccaccacgcccaccctgggc
ttcggcaccagcagcccccagctcagctcgcccatgaaccccgtcagcagcagcgaggac
atcaagcccccgctgggcctcaatggtgtcctcaaagtcccggcccacccctcagggaac
atggcgtccttcaccaagcacatctgtgccatctgcggggaccgctcctcaggcaagcac
tacggggtgtacagctgcgagggctgcaagggcttcttcaagcggacggtgcgcaaggac
ctgacctacacctgccgggacaacaaggactgtctgatcgacaagcggcaacgcaaccgc
tgccagtactgccgctaccagaagtgcctggccatgggcatgaagcgcgaagccgtgcag
gaggagaggcagcggggcaaggaccggaacgagaacgaggtggagtccaccagcagtgcc
aacgaggacatgccggtggagaagattctggaggcggagctggccgtcgagcctaagacc
gagacgtacgtggacgcgaacatggggctgaaccccaactcgcccaacgaccccgtcacc
aacatctgccaggcagcggacaagcagctctttaccctggtcgagtgggccaagcggatc
ccgcacttctcagagctgcccctggacgaccaggtcatcctgctgagggcaggctggaac
gagctgctcatcgcctccttctcccaccggtccatcgccgtgaaggacgggatcctcctg
gccaccgggctgcacgtgcaccggaacagcgcccacagcgccggggtgggcgctatcttt
gacagggtgctgacggagctcgtgtccaagatgcgggacatgcagatggacaagacggag
ctgggctgcctgcgcgccatcgtcctcttcaaccccgactccaaggggctctcgaaccca
gcggaggtggaggccctgcgggagaaggtctacgcgtccctggaggcatactgcaagcac
aagtaccctgagcagccgggaaggttcgccaagctgctgctgcgccttcctgctctgcgc
tccatcggcctcaagtgcctggaacacctttttttcttcaaactcatcggggacacgccc
atcgacaccttcctcatggagatgctggaagctccacaccaaatgacttag

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