Leopardus geoffroyi (Geoffroy's cat): 123593777
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Entry
123593777 CDS
T10761
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
123593777 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123593777 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lgf03310
]
123593777 (RORB)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123593777 (RORB)
Nuclear receptors [BR:
lgf03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
123593777 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
123593777
NCBI-ProteinID:
XP_045326211
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Position
D4:16531048..16730631
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AA seq
470 aa
AA seq
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MCENELKTKADATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYSGSISNGLGNLSNEAGGAYANGHVIDLPKSEGYYSVDSGQPSPDQSG
LDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQY
TTEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKL
IAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaacgagctcaaaactaaagctgacgccactgcacaaattgaagtgatacca
tgcaaaatttgtggcgataagtcctccgggatccactacggagtcatcacgtgcgaaggc
tgcaagggattcttcaggaggagccaacaaaacaatgcctcttactcctgcccaaggcag
agaaactgtttaatcgacagaaccaacagaaaccgttgccaacactgccgactgcagaag
tgtcttgccctcgggatgtcgagagatgctgtgaagttcgggaggatgtccaagaagcag
agggacagcctgtacgccgaggtgcagaagcaccaacagcggctgcaggagcagcggcag
cagcagagcggggaggcggaagccctcgccagggtctacagcggcagcatcagcaacggc
ctgggcaacctgagcaacgaggccggcggtgcctacgccaacggacacgtcatcgacctg
cccaagtccgagggctattacagcgtggattccggccagccgtcccctgatcagtcagga
cttgacatgactggaatcaaacagataaagcaagaacctatctatgacctcacctccgta
cccaacttgtttacctatagctctttcaacaacgggcagctagcacccgggataacgatg
actgaaatcgatcgaattgcacagaacatcattaagtcccacctggagacgtgtcagtac
accacggaggagctgcaccagctggcatggcagacccacacctacgaggaaattaaagcc
tatcagagcaagtccagggaagccctatggcagcaatgcgccatccagatcactcacgcc
atccagtatgtggtagagtttgcaaagcggataacgggcttcatggagctctgtcaaaat
gatcagattctacttctgaagtcaggttgcctggaagtggttttagtgagaatgtgccgt
gccttcaacccattaaacaacactgttctgtttgaaggaaaatatggaggaatgcagatg
ttcaaggccttaggttctgatgacctagtgaatgaagcatttgactttgcaaagaatttg
tgttccttgcagctgactgaggaggagattgctttgttctcatctgctgttctgatatct
ccagaccgagcctggctgatagaaccaaggaaggtccagaagcttcaggaaaaaatttat
tttgcacttcaacatgtgattcagaagaatcacctggatgacgagaccttggcaaagtta
atagccaagataccaaccatcacggcggtctgcaacttgcacggggagaagctgcaggta
tttaaacaatcacatccagacatagtgaatacactctttcctccattgtacaaggagctc
tttaatcctgactgtgccaccgtctgcaaatga
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