Leopardus geoffroyi (Geoffroy's cat): 123593831
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Entry
123593831 CDS
T10761
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04014
Ras signaling pathway
lgf04015
Rap1 signaling pathway
lgf04020
Calcium signaling pathway
lgf04024
cAMP signaling pathway
lgf04080
Neuroactive ligand-receptor interaction
lgf04082
Neuroactive ligand signaling
lgf04713
Circadian entrainment
lgf04720
Long-term potentiation
lgf04724
Glutamatergic synapse
lgf05010
Alzheimer disease
lgf05014
Amyotrophic lateral sclerosis
lgf05016
Huntington disease
lgf05017
Spinocerebellar ataxia
lgf05020
Prion disease
lgf05022
Pathways of neurodegeneration - multiple diseases
lgf05030
Cocaine addiction
lgf05031
Amphetamine addiction
lgf05033
Nicotine addiction
lgf05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
123593831 (GRIN1)
04015 Rap1 signaling pathway
123593831 (GRIN1)
04020 Calcium signaling pathway
123593831 (GRIN1)
04024 cAMP signaling pathway
123593831 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123593831 (GRIN1)
04082 Neuroactive ligand signaling
123593831 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
123593831 (GRIN1)
04720 Long-term potentiation
123593831 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
123593831 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
123593831 (GRIN1)
05014 Amyotrophic lateral sclerosis
123593831 (GRIN1)
05016 Huntington disease
123593831 (GRIN1)
05017 Spinocerebellar ataxia
123593831 (GRIN1)
05020 Prion disease
123593831 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
123593831 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
123593831 (GRIN1)
05031 Amphetamine addiction
123593831 (GRIN1)
05033 Nicotine addiction
123593831 (GRIN1)
05034 Alcoholism
123593831 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123593831 (GRIN1)
Ion channels [BR:
lgf04040
]
Ligand-gated channels
Glutamate (ionotropic)
123593831 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
123593831
NCBI-ProteinID:
XP_045326313
LinkDB
All DBs
Position
D4:93688832..93713149
Genome browser
AA seq
959 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQMCARHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgacactcgccctgcttttctcctgctcctttgcccgtgcc
gcctgcgaccccaagattgtcaacatcggagccgtgctgagcacgcgaaagcatgagcag
atgttccgtgaggccgtgaaccaggccaataagcggcatggctcctggaagattcagctc
aacgccacctcggtcacccacaagcccaacgccatccagatggccctgtcggtgtgcgag
gacctcatctccagccaggtctacgccatcctagttagccacccacctacccccaacgac
cacttcactcccacccccgtctcctacacagccggcttctaccgcatccccgtcctgggg
ctgaccacccgtatgtccatctactcagacaagagcatacacctgagcttccttcgcacg
gtgccgccctactcccaccagtcgagcgtctggttcgagatgatgcgcgtctacagctgg
aaccacatcatcctcctggtcagcgacgaccacgagggcagggccgcccagaagcgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgtggacccaaggctgagaaggtgctgcagttcgacccg
gggaccaagaacgtgacggcgctgctgatggaggcacgcgagctggaggcccgggtcatc
atcctctctgccagcgaggacgacgccgccaccgtgtaccgcgcagccgcgatgctgaac
atgacaggctccgggtatgtgtggctggtgggggagcgagagatctcggggaacgccctg
cgctacgccccggacggcatcatcggactgcagctcatcaatggcaagaacgagtcggcc
cacatcagtgacgccgtcggtgtggtggcccaggcggtgcacgaactcctggagaaggag
aacatcaccgacccacctcggggctgcgtgggcaacaccaacatctggaagacagggccg
ctcttcaagagggtgctgatgtcctccaagtacgcagacggggtgacaggccgtgtggag
ttcaacgaggacggggaccggaagttcgccaactacagcatcatgaacctgcagaaccgc
aagctggtgcaagtgggcatctacaacggcacccacgtcatccccaacgacaggaagatc
atctggccaggtggagagacagagaagccccgagggtaccagatgtccaccaggctgaag
attgtgacgatccaccaggagcctttcgtgtacgtcaagcccacgctgagcgatggcaca
tgcaaggaggagttcacggtcaatggggacccggtgaagaaggtgatctgcacaggaccc
aatgacacgtcaccgggcagcccacgccacacagtgcctcagtgctgctatggcttctgc
attgacctgctcatcaagttggcgcggaccatgaacttcacttatgaggtgcacctggtg
gccgatggcaagtttggcactcaagagcgggtgaacaacagcaataagaaggagtggaac
gggatgatgggcgagttgctcagcgggcaggcggacatgatcgtggcgcccctgaccatc
aacaatgagcgtgcacagtacatcgagttctccaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccccgaagcacgctggactcgttcatgcagcccttccag
agcacactgtggctgctggtggggctatcggtgcacgtggtggcggtgatgttgtacctg
ctggaccgcttcagccccttcggccggttcaaggtgaacagtgaagaggaggaggaggac
gcgctgaccctgtcttcggccatgtggttctcctggggtgtcctgctcaactcgggtatc
ggggaaggcgccccccgaagcttctcagcgcgcatcctgggcatggtgtgggccggcttc
gccatgatcatcgtggcctcctacaccgccaacctggcggccttcctggtgctggaccgg
cccgaggagcgcatcaccggcatcaacgacccgcggctgcggaatccctcggacaagttc
atctacgcgactgtgaagcagagctcggtggacatctacttccggcggcaggtggagctg
agcaccatgtaccgacacatggagaagcacaactatgagagcgcggccgaggccatccaa
gccgtgcgcgacaacaagcttcatgccttcatctgggactccgcggtgctggagtttgag
gcctcgcagaagtgcgacctagtgaccactggcgagctgttcttccgctcaggcttcggc
atcggcatgcgcaaggacagcccctggaagcagaacgtctccctgtccatcctcaagtcc
cacgagaacggcttcatggaagacctggacaagacgtgggtgcggtaccaggagtgtgac
tcgcgcagcaacgcccctgctacccttaccttcgagaacatggcaggggtcttcatgctg
gtggctgggggcattgtggccggcatcttcctgatcttcattgagatcgcctacaagcga
cacaaggacgctcgccggaagcagatgcagctagcctttgccgcggtgaacgtgtggaga
aagaacttgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcttccagcttcaagagacgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcga
cgcgctattgagagggaggagggccagctgcagatgtgtgcccgtcatagggagagctga
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