Leopardus geoffroyi (Geoffroy's cat): 123594096
Help
Entry
123594096 CDS
T10761
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03008
Ribosome biogenesis in eukaryotes
lgf03013
Nucleocytoplasmic transport
lgf03015
mRNA surveillance pathway
lgf05014
Amyotrophic lateral sclerosis
lgf05164
Influenza A
lgf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123594096
03015 mRNA surveillance pathway
123594096
03008 Ribosome biogenesis in eukaryotes
123594096
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
123594096
05168 Herpes simplex virus 1 infection
123594096
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123594096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123594096
03009 Ribosome biogenesis [BR:
lgf03009
]
123594096
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123594096
mRNA cycle factors
Stress granule specific factors
123594096
Ribosome biogenesis [BR:
lgf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123594096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
UBA_8
Motif
Other DBs
NCBI-GeneID:
123594096
NCBI-ProteinID:
XP_045326671
LinkDB
All DBs
Position
X:complement(82977273..83003719)
Genome browser
AA seq
615 aa
AA seq
DB search
MQTFKPNSGGSSHQGRKKVWSSFRGNFGKRNPHDERDGYDPQLSQHQEEDGTVMTRDIQE
YPQVRHTPYSTRHNKRRAKWHNEGHIHITVWRDRKLLKRQMGENTEDGTPGSWFKITIPY
GGKYDKTWLVNSIQSHCSVPFTPVDFHYVKNQARFFVQNASIASALKDVSYKICDEESQK
ISIFVNPSNVPYSVRYKLKPEEMKQLKLTMHKRYDVSHEALDLQSLRFDPDLVGHDIDII
LNRRNCMAATLQIIEENFPELLSLNLSNNKLYQLDGLSDIIQMVPTVKILNLSKNELTLV
WELNKMKGLMLEELWLDGNPLCDTFPDQSTYISAIKDCFPKLLRLDGQELSPPVTFDIDT
PYLIKPCKESYKGSEILKSLVLQFLQQYYLMYDSGDHQGLLGAYHHEACFSLTIPFNPED
QAPSSLCGYFKESRNMKKLKDPCLWVQLLKHTKRDIVCSLGMLPKTQHDLSSFVVDMWFQ
TEMMLCFSVNGVFKEVEGRSQGSVRAFTRTFIVTPASNSSICIVNDELFVREATPSETQS
AFSIRVPTPTSSSMPTLSQEQQEMVQAFSTQSGMKLEWSQKCLQDNEWNYTRAGQVFTML
KNEGKVPEEAFKQIA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccttcaaacccaatagtggtggtagttcacatcaaggacgaaagaaagtttgg
agttcgttccgaggtaattttggcaagaggaatccccatgatgaacgggatggatatgac
cctcagctttcacagcaccaggaggaggatggaactgtgatgacaagggatatccaggag
tacccccaagtaagacacactccctatagcacccgacacaacaagaggagagcaaaatgg
cataatgaaggccatatccatattactgtgtggagagatagaaaacttctgaagagacaa
atgggggagaatacagaagatggaaccccagggagctggttcaagatcactattccctat
gggggaaagtatgacaagacatggctagtgaattcaatccagagccattgcagtgtcccc
ttcactccagtggattttcactacgtgaaaaaccaggctcggttctttgtccagaatgcc
agcattgcctctgcattgaaagatgtcagctacaagatatgtgatgaggagagccaaaag
atatcgatctttgtcaatccctctaatgtaccctactctgtgcggtataagttgaagcca
gaagaaatgaagcagctaaagctgaccatgcacaaacgctatgatgtctcccatgaagct
cttgacctccagagtctccgctttgacccagacttggtgggccatgatattgatataatc
ctgaatcgaagaaactgcatggctgccaccctgcagatcattgaagagaatttccctgag
ctgttgtccttgaacttgagcaacaacaaactgtaccagctggatggcctgtctgacatt
atacagatggtccccacagtcaagatcctgaacctctccaaaaatgagctgaccttggtg
tgggagttaaacaagatgaaagggctgatgcttgaggaactttggctagacgggaacccc
ttgtgcgacaccttcccagaccagtccacctacataagtgccatcaaggattgttttcct
aagttgttacgtctggatggccaggagttatccccaccagttacttttgatattgacaca
ccctacttaataaagccctgcaaggaaagctacaaaggatctgagatactgaagagtcta
gtcttgcaattcctgcagcagtactacttgatgtacgactctggagaccaccagggtctc
ctcggtgcttaccatcatgaggcctgcttctccctgaccattcccttcaacccggaggac
caagccccaagcagcttgtgtgggtacttcaaggaaagcaggaatatgaagaagctcaag
gacccctgcctgtgggttcagctgctgaagcatacaaaacgtgacattgtgtgctccctc
ggtatgctgcccaaaactcagcatgacctcagctcctttgtggtggacatgtggttccag
acggagatgatgctctgcttctctgtcaatggggtgttcaaggaagtggaaggaagatct
cagggttctgttcgtgccttcacccggaccttcattgttacccctgccagcaattccagt
atatgcatcgtgaatgatgagctgtttgtgagagaggccacccccagtgagactcagagt
gcgttctccatccgagtgcctacacccacctccagctccatgcccaccctctcccaggag
cagcaggaaatggtgcaggctttctccactcagtctgggatgaaactcgagtggtctcag
aagtgccttcaggacaacgagtggaactacaccagagctggtcaggtcttcactatgctc
aagaacgagggcaaggtcccagaggaggccttcaaacaaatcgcctag
DBGET
integrated database retrieval system