KEGG   Leopardus geoffroyi (Geoffroy's cat): 123594096
Entry
123594096         CDS       T10761                                 
Name
(RefSeq) nuclear RNA export factor 2-like
  KO
K14284  nuclear RNA export factor
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03008  Ribosome biogenesis in eukaryotes
lgf03013  Nucleocytoplasmic transport
lgf03015  mRNA surveillance pathway
lgf05014  Amyotrophic lateral sclerosis
lgf05164  Influenza A
lgf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123594096
   03015 mRNA surveillance pathway
    123594096
   03008 Ribosome biogenesis in eukaryotes
    123594096
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    123594096
   05168 Herpes simplex virus 1 infection
    123594096
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    123594096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgf03019]
    123594096
   03009 Ribosome biogenesis [BR:lgf03009]
    123594096
Messenger RNA biogenesis [BR:lgf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123594096
   mRNA cycle factors
    Stress granule specific factors
     123594096
Ribosome biogenesis [BR:lgf03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    123594096
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_4 LRR_8 UBA_8
Other DBs
NCBI-GeneID: 123594096
NCBI-ProteinID: XP_045326671
LinkDB
Position
X:complement(82977273..83003719)
AA seq 615 aa
MQTFKPNSGGSSHQGRKKVWSSFRGNFGKRNPHDERDGYDPQLSQHQEEDGTVMTRDIQE
YPQVRHTPYSTRHNKRRAKWHNEGHIHITVWRDRKLLKRQMGENTEDGTPGSWFKITIPY
GGKYDKTWLVNSIQSHCSVPFTPVDFHYVKNQARFFVQNASIASALKDVSYKICDEESQK
ISIFVNPSNVPYSVRYKLKPEEMKQLKLTMHKRYDVSHEALDLQSLRFDPDLVGHDIDII
LNRRNCMAATLQIIEENFPELLSLNLSNNKLYQLDGLSDIIQMVPTVKILNLSKNELTLV
WELNKMKGLMLEELWLDGNPLCDTFPDQSTYISAIKDCFPKLLRLDGQELSPPVTFDIDT
PYLIKPCKESYKGSEILKSLVLQFLQQYYLMYDSGDHQGLLGAYHHEACFSLTIPFNPED
QAPSSLCGYFKESRNMKKLKDPCLWVQLLKHTKRDIVCSLGMLPKTQHDLSSFVVDMWFQ
TEMMLCFSVNGVFKEVEGRSQGSVRAFTRTFIVTPASNSSICIVNDELFVREATPSETQS
AFSIRVPTPTSSSMPTLSQEQQEMVQAFSTQSGMKLEWSQKCLQDNEWNYTRAGQVFTML
KNEGKVPEEAFKQIA
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgcaaaccttcaaacccaatagtggtggtagttcacatcaaggacgaaagaaagtttgg
agttcgttccgaggtaattttggcaagaggaatccccatgatgaacgggatggatatgac
cctcagctttcacagcaccaggaggaggatggaactgtgatgacaagggatatccaggag
tacccccaagtaagacacactccctatagcacccgacacaacaagaggagagcaaaatgg
cataatgaaggccatatccatattactgtgtggagagatagaaaacttctgaagagacaa
atgggggagaatacagaagatggaaccccagggagctggttcaagatcactattccctat
gggggaaagtatgacaagacatggctagtgaattcaatccagagccattgcagtgtcccc
ttcactccagtggattttcactacgtgaaaaaccaggctcggttctttgtccagaatgcc
agcattgcctctgcattgaaagatgtcagctacaagatatgtgatgaggagagccaaaag
atatcgatctttgtcaatccctctaatgtaccctactctgtgcggtataagttgaagcca
gaagaaatgaagcagctaaagctgaccatgcacaaacgctatgatgtctcccatgaagct
cttgacctccagagtctccgctttgacccagacttggtgggccatgatattgatataatc
ctgaatcgaagaaactgcatggctgccaccctgcagatcattgaagagaatttccctgag
ctgttgtccttgaacttgagcaacaacaaactgtaccagctggatggcctgtctgacatt
atacagatggtccccacagtcaagatcctgaacctctccaaaaatgagctgaccttggtg
tgggagttaaacaagatgaaagggctgatgcttgaggaactttggctagacgggaacccc
ttgtgcgacaccttcccagaccagtccacctacataagtgccatcaaggattgttttcct
aagttgttacgtctggatggccaggagttatccccaccagttacttttgatattgacaca
ccctacttaataaagccctgcaaggaaagctacaaaggatctgagatactgaagagtcta
gtcttgcaattcctgcagcagtactacttgatgtacgactctggagaccaccagggtctc
ctcggtgcttaccatcatgaggcctgcttctccctgaccattcccttcaacccggaggac
caagccccaagcagcttgtgtgggtacttcaaggaaagcaggaatatgaagaagctcaag
gacccctgcctgtgggttcagctgctgaagcatacaaaacgtgacattgtgtgctccctc
ggtatgctgcccaaaactcagcatgacctcagctcctttgtggtggacatgtggttccag
acggagatgatgctctgcttctctgtcaatggggtgttcaaggaagtggaaggaagatct
cagggttctgttcgtgccttcacccggaccttcattgttacccctgccagcaattccagt
atatgcatcgtgaatgatgagctgtttgtgagagaggccacccccagtgagactcagagt
gcgttctccatccgagtgcctacacccacctccagctccatgcccaccctctcccaggag
cagcaggaaatggtgcaggctttctccactcagtctgggatgaaactcgagtggtctcag
aagtgccttcaggacaacgagtggaactacaccagagctggtcaggtcttcactatgctc
aagaacgagggcaaggtcccagaggaggccttcaaacaaatcgcctag

DBGET integrated database retrieval system