Leopardus geoffroyi (Geoffroy's cat): 123594500
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Entry
123594500 CDS
T10761
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lgf04515
]
123594500 (PCDH19)
Cell adhesion molecules [BR:
lgf04515
]
Cadherins
Protocadherins
123594500 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Neur
Motif
Other DBs
NCBI-GeneID:
123594500
NCBI-ProteinID:
XP_045327185
LinkDB
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Position
X:complement(81175950..81309770)
Genome browser
AA seq
1095 aa
AA seq
DB search
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFHITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYAVSVPENSPPSTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKTFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFSESSKASYELIVVAHDHGKTSLSASALLLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCRIAEY
SYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRR
SESTFLNVENQNTRNTSTNHIYHHSFNSQGHQQPDLIINGVPLPETENYSFDSNYVNSRA
HLIKSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPD
HDQNEGFHCREECRILGHSDRCWMPRNPMPTRSKSPEHVRNVIALSIEATAADVEAYDDC
GPTKRTFATFGKDISDHPAEERPTLKGRRTVDVTICSPKVNGAIREAGNGCEAISPVTSP
LHLKSPLPTKPSMSYTLAPPGRDLEQYVNNGPSRPSEAEPRGADSEKVIHEVNPTLKEGR
DKESPGMKRLKDIIL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctcctgctgcccgtgctgctgctgttggccgtactgtggacacaggcagcc
gccctcattaacctcaagtactcggtagaagaggaacagcgcgccgggacggtaatcgcc
aacgtggccaaggacgctcgtgaggcgggtttcgctctggatccacggcaggcctctgcc
tttcgtgtggtgtccaactcagctccgcacctggtggatattaaccccagttcgggcctg
cttgtcactaagcagaagatcgaccgcgacctgctgtgccgccagagccccaagtgcatc
atatcgcttgaggtcatgtccagctcaatggagatatgtgtgattaaggtggagatcaag
gatctgaacgacaatgcgcccagctttccagcggcacaaattgagctggagatctcagag
gcggctagtccgggcacgcgcatcccgctggacagcgcctatgacccggactctggcagc
tttggcgttcagacgtatgagctcacgcctaatgagctgtttggcctggagatcaagacg
cgtggcgatggctcacgatttgcggaacttgtagtggagaagagtctggatcgagagacg
cagtcgcactacagctttcacatcactgcgctcgacggcggcgacccaccgcacctgggc
actgttggcctcagcatcaaggtgaccgattccaatgacaacaacccggtgtttggcgag
tccacctatgcagtgagcgtgccagagaactcacctcccagtacaccggtcatccgcctc
aatgccagcgacccagacgaaggcaccaatggacaggtggtctactccttctatggctat
gtcaatgaccgcacgcgcgagcttttccagatcgatccgcacagtggcctggtcacagtc
accggtgccctagactatgaagagggccacgtgtacgaactggacgtgcaggccaaggac
ttaggacccaactccatcccggcacactgcaaggtgaccgtcagcgttctggacaccaat
gacaacccaccggtcatcaacctgctgtcagttaacagcgagctggtggaagtgagcgag
agtgcccctccaggctacgtgattgcgctggtgcgggtgtctgatcgggactctggcctc
aatgggcgcgtgcagtgccgtttgctgggcaacgtgccctttcggcttcaggagtatgag
agcttctctactatcctggtggacggacggctggaccgtgagcagcatgaccagtacaac
ctcacgatccaggcgcgtgacggcggtgtgcccatgctgcagagtgctaagtcctttaca
gttcgaataactgacgagaatgacaaccacccgcacttctccaagccctactaccaggtc
attgtgcaggagaacaacacgcctggcgcctacctgctttctgtgtctgcccgagaccct
gacctgggtctcaatggcagtgtctcctaccagatcgtgccatcgcaggtgcgggacatg
cctgtcttcacctatgtctctatcaaccccaactccggtgacatctacgcgcttcgatcc
ttcaaccacgagcagaccaagacattcgaattcaaggtgctggccaaggatggcggcctg
ccctcgctgcagagcaacgccaccgttcgggtcatcatcctcgacgtcaatgataatact
ccggtcatcacggccccacccctgatcaatggcactgcagaggtctacatcccccgcaac
tctggcataggctacctggtgaccgtcgtcaaagcagacgactacgatgagggcgagaac
ggccgggtcacctacgacatgaccgagggcgaccgtggcttctttgaaatagatcaggtc
aatggagaagtcagaaccactcgcacctttagtgagagctcaaaggcttcttatgagctt
attgtggtggcccacgaccatggcaagacgtctctctccgcctctgcactcctattaatc
tacctgtcccctgctcttgatgcccaagagtcaatgggctcggtgaacttgtccctcatt
ttcattatcgccctgggctccattgcgggcatcctctttgtcactatgatcttcgtggcg
atcaagtgcaagcgagacaacaaagagatccggacctacaactgcagaatcgctgagtac
tcctatgggcatcaaaagaaatcaagcaagaagaaaaaaatcagtaagaatgacattcgt
ctggtaccccgggatgtggaggagacagacaaaatgaatgttgtcagttgctcctccctg
acctcttccctcaactatttcgactaccaccagcagacactgcccctgggctgccgccgc
tctgagagtactttcctgaatgtggagaaccagaatacccgcaataccagcaccaaccac
atctatcatcactctttcaacagccaaggtcaccagcagccagacttgatcatcaatggt
gtgcctctgcctgagactgaaaactattcctttgactccaactatgtgaacagccgagcc
catttaatcaaaagctccaccttcaaggacttagagggcaacagtctaaaggatagtggt
catgaagagagcgaccagactgacagtgaacatgatgtccagcggagcctatactgtgat
actgctgtcaatgatgtgctgaacaccagtgtgacgtccatgggatctcagatgcctgac
catgatcagaatgaaggatttcattgcagggaagaatgcaggattcttggccactctgac
aggtgctggatgccccggaaccccatgcccaccaggtccaagtcccctgagcatgtgagg
aatgtcatagctctgtccattgaagctactgctgctgatgttgaggcttatgacgactgc
ggccccaccaagcggacttttgcaacctttggaaaagatatcagtgaccacccagctgag
gagaggcccaccctgaaaggcagaagaactgttgatgtgaccatctgcagccccaaggtc
aacggcgctattcgggaggcgggcaatggttgtgaggctattagccctgttacctccccc
ctacacctcaagagccctctgcccaccaagccctccatgtcttacaccctggcgcccccg
ggccgtgatctggagcagtatgtcaacaatggcccttctcgtccctctgaagctgagccc
cgtggagccgacagcgagaaagtcatccatgaggtcaaccccactctgaaggagggtcgc
gacaaagaatctcctggtatgaagcgtctgaaggatatcattctctaa
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