Leopardus geoffroyi (Geoffroy's cat): 123595088
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Entry
123595088 CDS
T10761
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04110
Cell cycle
lgf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123595088 (SMC1A)
04114 Oocyte meiosis
123595088 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123595088 (SMC1A)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123595088 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
123595088 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
123595088
NCBI-ProteinID:
XP_045328260
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All DBs
Position
X:complement(46255943..46303100)
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AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
DSVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaagtcgtacaagggtcggcagatt
atcggaccgtttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgcgatcagctttgtattgggtgagaaaaccagcaacctgcgagtaaagacc
ctgagggacctgatccatggagctcctgtgggcaagccagctgccaatcgggcctttgtc
agcatggtctactctgaggagggtgctgaggaccgcacctttgcccgtgtcattgttggg
ggttcttctgagtacaagatcaacaacaaagtggttcagctacatgagtacagtgaggaa
ttagagaagttgggcattctcatcaaagctcgtaacttcctcgtcttccagggtgctgtg
gaatctattgccatgaagaatcccaaagagaggacagctctatttgaagagataagtcgc
tctggggagctggcccaggagtatgacaagcgaaagaaggaaatggtgaaggctgaagag
gacacacagtttaattaccatcgcaaaaaaaacattgcggctgaacgcaaggaagccaaa
caggagaaagaagaggctgaccgctaccagcgcctgaaggatgaggtggtgcgagctcag
gtgcagctgcagctctttaagctttatcacaatgaagtggagattgagaagctcaataag
gaactggcctctaagaacaaggagattgagaaggacaagaagcgtatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggagcagcagcagatt
gagaaggagatcaaggagaaggactcagagctgaatcagaagcgacctcaatacatcaaa
gccaaggagaatacctcccacaaaatcaagaagctggaagcagccaagaagtccctacag
aatgctcagaagcattacaagaagcgtaaaggtgacatggatgagctggaaaaggagatg
ctgtcagtagagaaagcccggcaggagtttgaggaacggatggaagaggagagtcagagt
cagggcagagacttaaccttggaggagaatcaggtgaagaaataccaccggttgaaagaa
gaagccagcaagagagcggctacgttggcccaggagctggagaagttcaatcgagatcag
aaagccgaccaggaccggctggatctggaagagcggaagaaagtagagacagaggccaag
atcaagcaaaagctgcgggagattgaagagaatcagaaacggattgagaaactagaggaa
tacattaccactagcaagcagtccctagaggagcagaagaagttagagggggagctgaca
gaggaggtggagatggccaaacggcgtattgatgagatcaataaggagctgaaccaggtg
atggagcagctaggtgatgcccgtattgaccgccaggagagcagccgccaacagcgaaag
gcagagattatggaaagcatcaagcgcttgtaccctggctctgtgtatggacgcctcatt
gacctctgtcagcccacacaaaagaagtaccagattgctgtgaccaaggttttgggcaag
aacatggatgccattatcgtggactctgagaagacaggccgggactgtattcagtatatc
aaggaacagcgtggggagcctgagaccttcttgcctcttgactacctggaggtgaaacct
acagatgagaagctccgggaactgaagggggccaagctggtgattgacgtaattcgctat
gagccaccccacatcaaaaaggccctgcaatatgcttgtggcaacgcccttgtgtgtgac
aatgtggaggatgcccgccgcattgcctttggcggccaccagcgtcacaagacggtggca
ctggatgggaccctgttccagaagtcaggggtgatctctggtggagccagtgacttgaaa
gccaaggctcggcgctgggatgagaaagcggtagataagttgaaagagaagaaggagcgg
ttgacagaggagctgaaagagcagatgaaggcaaagcggaaagaggcagagctacgtcag
gtgcagtctcaggcccatggactacagatgcggctcaagtactcgcagagtgacctggaa
cagactaagacaagacatctagccctgaatctgcaggaaaagtccaagctggagagtgag
ctagccaactttgggcctcgcattaatgatatcaagaggatcatccagagccgagagagg
gaaatgaaagacttgaaggagaagatgaaccaggtggaggatgaggtgtttgaagagttt
tgtcgggagattggtgtgcgcaacatccgagagtttgaggaagagaaggtgaagcggcag
aacgaaattgccaagaagcgtttggagtttgagaatcagaagactcgcttgggcatccag
ttggattttgaaaagaaccaactgaaagaggaccaggataaagtgcacatgtgggagcag
acagtgaaaaaggatgaaaatgagatagaaaaactcaagaaggaggagcaaagacacatg
aagatcatagatgagaccatggcccagctacaagacctgaagaatcagcacctggccaag
aagtcggaggtgaatgataagaatcatgagatggaggagattcgtaagaaactggggggc
gccaacaaggaaatgacccacttacagaaggaggtaacagccattgagaccaagcttgaa
cagaaacgcagtgaccgccacaacctgctacaggcctgcaagatgcaggacatcaagttg
ccactgtctaaaggcactatggacgacattagtcaggaagagggtagctcccagggggag
gattcagtgagtggttctcagcgaacttccagtatctatgcacgagaggccctcatcgag
attgactacggtgacctgtgtgaggatctgaaggatgcccaggccgaggaggagatcaaa
caggagatgaatacactgcagcagaagctcaatgagcagcagagtgtactccagcgtatt
gctgcccctaacatgaaagccatggaaaagctggaaagtgtccgagacaagttccaggaa
acctcagatgaatttgaggcagcccgaaagcgagccaagaaagccaagcaggcatttgaa
cagatcaagaaggagcgctttgaccgcttcaatgcttgttttgaatccgtggccaccaac
attgatgagatctacaaggccctatcccgcaacagcagtgcccaggcattcctgggccct
gagaaccctgaggagccctacttggacggcatcaactacaattgcgtggctcctggcaaa
cgcttccggccaatggacaacttgtcagggggggagaaaacagtggcagctctggccttg
ctctttgccatccacagctacaagccagcccccttcttcgtcctggatgagatcgatgct
gccttggataacaccaacattggcaaggtggcaaattacatcaaggagcagtcgacttgc
aacttccaggccatcgtcatctctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctaccccgagcaaggggactgtgtgatcagcaaagtcctgaccttcgacctc
accaagtacccagatgccaaccccaaccccaatgagcagtag
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integrated database retrieval system
