Leopardus geoffroyi (Geoffroy's cat): 123595223
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Entry
123595223 CDS
T10761
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123595223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123595223
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123595223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
123595223
NCBI-ProteinID:
XP_045328583
LinkDB
All DBs
Position
X:complement(20416334..20420113)
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AA seq
1196 aa
AA seq
DB search
MQQALERALDRAEYVIASAQQRPPERKGSASGGASLDEKLYDLYVEECGKEPEATEELRS
NVNLLEKLLRRESLPCLVVNLYPGKEGYSLMLEGENGSYSETIRLPYEEGELLEYLDAEQ
LPPALVDLLEKSQVNFFHSGCVIAQVRDYRQCSREPPGYASRHVLLRPTMQTLACDVQSM
TSDDQTWTQEDRLLLESQLILATAEPLCLDPSVSVACTANRLLYNKQKMNTGPMKRSFKR
YSAPSLNRQQELSHRPPPPELRVWASCKKIRERQAGPQHDLKISKAGNCVDMWKQRPCDL
AVPSGVDVQKYARGKKSARYDGSPPTAWPAHKVEGDSVLGYEAGGESQIAQLTSVQPPND
PPLSGRRRPCKEARREGQGSPPHSSTDDRPDSVRPGSKTDAGTEAIRSAVLVQRKAKGPA
AASHGSSGPASLSQPPPGKETAQPETVSVWSSVLGKGVSHPPLRFRLSWSSGGTRSGNSF
IPVEASGFFKSPAPAPAPAPQPPSLSQNSSVDVNRVSMFPAAALSSSSSPQGTLAPPVTA
NSQQPSAGATRGSTLPAATLSTAGSSQTTLAPPVTANSQQSPVRVIRVSMLPAATPSTAG
SSQTTLAARVTANSQQSSAEVTRGSPFPAATPSTTGSSQTTLAARVTANSQQSSAGATRG
STRPAATPSTAGSSQTTLAPPVTASSQKPSAKQVIQVSMLPAATLPTTGSSQRSLALPVT
AHSQQSSAEVTRGSPFPAATPSTASSSQTTLAAPVTANSQQSSAGATRGSKLPAATLSTA
GSSQTTLAPPVTASCQKPSAKQVTQVSMLPAATLSTTGSSQTTLVPLVTANSQQSPVRVI
RVSMLPAATRPTAGSSQTTLAAPVTANSQQSSAGATRVSMLPAATLSTAGSSQTTLAPPV
TASSQKPFAKQVTQLSMLPEATLPTTGSSQRSLATQVTARSPGPNIIQLAGPVCGAQPLA
RGSSPGQGSTAGATDPAGIQPGSLPSGARPPNAVRTAAQAASPVRVRFFFKNASGLKPVT
LLELPQGSPPLNAQQQPEQRLYRLIPQEQLQQASASGPWQPVPRGPGARGPAPPETASPA
QQAFVLNLLGQGRGRGRGQGQGQGSLLQPQAAVLSLLGCAAENQARAGPSGPRHTLQLSP
ASQPWPQQQAQQHRILQHPVAVTTVATQTAQPSWGQRAASQSKGEKNRGPPSPPRS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggctttagaacgagctctggaccgtgcggagtatgtcattgccagtgcccag
cagaggcctcctgaaaggaaaggctcagcgagtgggggagcatctctggatgaaaaactt
tatgacctgtatgtggaagaatgcgggaaagagcctgaggctacggaggaattaagaagc
aacgtgaacttgttggagaagctcctgaggagagagtcgttgccgtgcttagtggtcaac
ctatacccaggaaaggagggatattcgctgatgctcgagggcgaaaatggatcctattcg
gagaccattcgactgccttacgaagaaggggagttgctcgaatacctggatgctgaacaa
ttacctcctgctctggtggatctcctggaaaaatctcaggttaacttttttcactctggg
tgtgtcatagcccaggtacgggactacaggcagtgcagtcgggaacctcccggctacgcg
agcaggcatgttctcctgcggccaacgatgcagacgttagcctgcgacgtgcagtccatg
accagcgatgaccagacctggacccaggaagacaggcttttgctggagagccagctgatc
ttagccacggccgaaccgctgtgtcttgatccttctgtatcagtagcctgcactgcaaac
aggctgctctataacaagcaaaagatgaacactggccccatgaaaaggagcttcaagagg
tattctgcaccctccctgaaccggcagcaggagctgtctcatcgtccacctcctcctgag
ctgagagtatgggcctcttgcaagaaaatcagagaaaggcaagcgggtccgcagcacgac
ctcaaaatttctaaagcggggaactgcgtcgatatgtggaaacagagaccctgtgacttg
gccgtaccttccggagtggacgtgcagaaatacgccagggggaagaagtccgccagatac
gatggctcgccaccgacggcctggccagcccacaaggtagaaggtgattccgtattgggc
tatgaagctggcggtgagtctcagatagcgcagctgacttccgtgcagccgccgaatgac
ccacctttgtctggaagaagaaggccctgcaaagaagccagacgtgagggacaggggtct
cctccgcactcctccacagacgatcgtccagacagtgtccggcctggctcaaagacggat
gctgggacggaagccattcggtcagctgtcttggtccagcgcaaggccaagggtcccgcc
gccgcgtcacacggctccagtggcccagccagcctcagccagccgcctcccgggaaagaa
acagcacagcctgagacggtgtcggtttggtcttcagtcctggggaagggagtcagccat
ccacctctacgcttcagactttcctggagctcaggagggactcggtcaggcaacagtttc
atcccagtggaggcgagcggcttctttaaatctccagctcctgctcccgctcctgctcct
cagcccccgagtctttcccagaattcgtctgtggacgtgaatcgagtgagcatgtttccc
gcagccgccctgtccagcagcagctcgccacaaggaaccctggcccccccggtcacggcc
aactcccagcagccctctgcgggagcgactcgaggtagcacgcttcctgcggccacactg
tccaccgccggctcatcacagacaaccctggcccccccggtcacggccaactcccagcaa
tcccctgtgagagtgattcgagttagcatgcttcctgcagccacaccgtccaccgccggc
tcatcacagacaaccctggccgcccgggtcacggccaactcccagcagtcctctgcggaa
gtgactcgaggtagcccgtttcctgcagccacaccgtccaccaccggctcatcacagaca
accctggccgcccgggtcacggccaactcccagcagtcctctgcgggagcgactcgaggc
agcacgcgtcctgcagccacaccgtccaccgccggctcatcacagacaaccctggccccc
ccggtcacggccagctcccagaagccctctgcgaaacaggtgattcaagttagcatgctt
cccgcagccaccctacccactaccggctcatcacaaagaagcctggccctcccggtcacg
gcccactcccagcagtcctctgcggaagtgactcgaggtagcccgtttcctgcagccaca
ccatccaccgccagctcatcacagacaaccctggccgccccggtcacggccaactcccag
cagtcctctgcgggagcgactcgaggtagcaagcttcctgcagccacactgtccaccgcc
ggctcatcacagacaaccctggcccccccggtcacggccagctgccagaagccctctgcg
aaacaggtgactcaagttagcatgcttcccgcggccaccctctccactaccggctcatca
cagacaaccctggtccccctggtcacggccaactcccagcaatcccctgtgagagtgatt
cgagttagcatgcttcctgcagccacacggcccaccgccggctcatcacagacaacgctg
gccgccccagtcacggccaactcccagcagtcctccgcgggagccactcgagttagcatg
cttcctgcagccacactgtccaccgccggctcatcacagacaaccctggcccccccggtc
acggccagctcccagaaaccctttgcgaaacaggtgactcaacttagcatgcttcccgag
gccaccctacccactaccggctcatcacaaagaagcctggccacccaggtcacggcccgc
tcccctggccccaacatcatccagctggcgggcccggtctgtggagcccagcctttggcg
aggggttccagccccgggcagggctctaccgctggggccacagatcctgcgggaatccag
cccggcagcctgccctcgggagctcggccaccaaatgcagtgcgcactgcagcacaggct
gcgtctccagtccgcgttcgttttttttttaaaaacgcttcaggcctcaagccggtgact
ctgctggagcttccgcaaggttcgccccctttgaacgcccagcagcagccagagcagcgg
ctctatcggttgattccacaggaacaacttcagcaagcctccgcttctggtccttggcag
ccagtgccacggggtcccggtgcccgaggcccagcccctccagagacggcctcacctgct
cagcaagcctttgtcctgaacctcctgggacagggacggggccggggacggggacaggga
cagggacaggggagtttgctgcagccccaggcagctgtgttgtctctgcttggctgtgct
gcagagaaccaggcaagagccgggccgagcggccctcggcacacgctgcagctgtcccct
gcctcgcagccgtggccacagcagcaggcgcaacagcatagaatcttgcagcacccggtg
gccgtgacaacagtagccacccagacggctcagccttcttggggccagcgggccgcaagc
cagtccaaaggtgaaaagaacagaggcccgccttcccctcccagatcctga
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