Leopardus geoffroyi (Geoffroy's cat): 123595268
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Entry
123595268 CDS
T10761
Symbol
SMARCAD1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
123595268 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123595268 (SMARCAD1)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123595268 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
123595268
NCBI-ProteinID:
XP_045328678
LinkDB
All DBs
Position
B1:complement(126920958..127000184)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRSKIEEVPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDSDIT
EKTEDSSVPEATENERKAGISYFKNQRGIQYIDLSSDSEDAVSPNCSSTVQERKFNKDTV
IIVSEPSEDEESQSLPTMAGRHNDDISEMEDFSELEDLKDAKLQTLKELFPQRSDSDLLK
LIESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPYEEDEFNDDQSIKKKRLDHGEE
SNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDM
QYASQSEFPNGKEASSRSQNYPKNSAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTG
NGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINSFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgttttcgctttgagaaaaggagtaagattgaggaagtg
cccgaagcaaccccccaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaggttagcagggcaggcacacctgattcagatataact
gaaaaaacagaagattctagtgttccagaagctacagaaaatgaaagaaaagctggtata
tcctatttcaagaatcaaaggggaatacagtatattgatctgtcttctgatagtgaagat
gccgtgtctccaaattgttccagtacagttcaagagagaaagttcaacaaagacacagtg
attatagtttctgagccatctgaagatgaagagtcccagagccttcctaccatggcaggt
agacataatgatgatatttcagaaatggaagacttttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaacttttcccacaaagaagtgacagtgacttacttaag
ttgattgaatcaacaagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcagaaggtggtggacccaggaaaagaaaattatcttcttcttcagagccatatgag
gaagatgagtttaatgatgatcagtctataaaaaagaaaagactggatcacggagaagaa
tcaaatgagtctgcagaatctagcagtaattgggaaaaacaagaaagtattgtattgaaa
ttgcaaaaggaatttcccaattttgataaacaggaactaagggaagtactcaaggaacat
gaatggatgtacacagaagctttagaatctttaaaagtgtttgcagaagaccaagatatg
cagtatgcttcacaaagtgaatttccaaatggaaaagaagcttcttcaagaagtcagaat
tatcctaaaaattcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaataagaaacgtaaaaaaaatgtatttaatcctaagagagttattgaagactct
gaatatgattcgggttctgatgtcggcagctcactagatgaggactacagtagtggtgaa
gaagtgatggaggatggctataagggtaaaattcttcactttcttcaagatgcttcaatt
ggtgaactaactttgattcctcagtgttctcagaaaaaggctcagaagataactgaactc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaactaatggcttatca
gaagatttgatatggcattgtaaaacactgatccaagaaagggatgtagttataaggctt
atgaacaaatgtgaagacatttcaaataagttgacaaaacaagttaccatgctcactgga
aatggaggtggatggaacatagaacaaccctccattctaaaccagagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggc
attttggcagatgaaatgggcctaggaaaaactattcaagccattgcattcctggcatac
ctctatcaggagggtaataaaggtcctcatttgatcgttgttccagcatcaactatagat
aactggttgagagaagttaatttatggtgccccactttaaaggtgctctgttactatggc
tctcaagaagaacgtaaacagattagatataacatccatagtaaatacgaagaatataat
gtaattgtgaccacgtataattgcgcaatcagcagttctgatgatcgtagtctgtttcga
aggctgaaacttaattatgctatttttgatgagggccatatgctgaagaatatgggctct
atccgctaccagcaccttatgacaattaatgcaaataaccgtttgctgctcacgggcaca
cccgtacagaataatctgttagaactcatgtcactattgaatttcgttatgccacacatg
tttagtagtagcaccagtgaaatacgaagaatgttttcctctaagacaaaatcagcagat
gagcaaagtatatatgaaaaagagagaatagcacatgcaaaacaaattataaaaccattt
attctcagaagagtaaaagaagaggttctcaagcagctacctcccaagaaagatcgaatt
gaattgtgtgcaatgtcagaaaaacaggagcaactctatttgggtcttttcaacagatta
aaaaaatctatcaataatatggaaaaaaatacagagatgtgcaatgtaatgatgcagttg
agaaaaatggccaatcatcctttattacatcgccaatattacacagctgaaaagctcaag
gaaatgtctcagcttatgctaaaggaacctacacattgtgaggctaaccctgatttgatc
tttgaagatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcga
catattaatagcttccagttagacatggacttgattttagattctggaaaattccgagtt
ttaggatgcatcttgtctgaattgaaacagaagggtgatagagttgtattatttagccaa
tttaccatgatgctggatattttagaggttctcttaaaacatcatcagcataggtacctc
agattagatggaaagactcagatttctgaaaggattcatctaattgacgagtttaatacc
gatatggatatcttcgtgtttctgctgtcaacaaaagctggtggcctaggaataaatctg
acttcagcaaatgttgttatacttcatgatattgactgtaacccttacaatgacaaacaa
gcagaagatagatgccatagagtaggccagactaaagaagtactagttataaaattaata
agccaagggacaattgaagaatccatgctaaaaattaaccaacagaaattgaaactagaa
caagatatgaccacagtagatgaaggtgatgaagggagtatgccagcagatatagccacg
ttactaaaaacgtcaatgggcctgtga
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