Leopardus geoffroyi (Geoffroy's cat): 123595809
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Entry
123595809 CDS
T10761
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123595809 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123595809 (CNOT6L)
Enzymes [BR:
lgf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
123595809 (CNOT6L)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123595809 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123595809 (CNOT6L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
123595809
NCBI-ProteinID:
XP_045329606
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All DBs
Position
B1:142182102..142303460
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AA seq
555 aa
AA seq
DB search
MRLIGMPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTA
LHLNDNYLSRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYE
LGRLFQLQTLGLKGNPLSQDILNLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKER
DQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQE
VETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAH
MHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVV
EYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNY
TFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP
PLLPLVNGVHLPNRR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagactaatagggatgccaaaggaaaaatatgatcctccagatcctcgcagaatttat
accatcatgtcagcagaggaggtagccaatgggaaaaaatctcactgggcagaattagaa
atctcgggtagagtgcggagcttaagtacgtcactttggtcattgacacacttgacagca
ctgcacctaaatgacaattaccttagtcgcattccacctgatattgccaagcttcataat
ctggtttacctggatctgtcatccaataaactcagaagtttaccagcagaactaggaaac
atggtgtctctcagggaattgcttttaaataacaatctgttacgggttttgccttatgaa
cttggtcggctcttccagctacaaactctaggtttgaaaggcaatcctttatcacaggat
attctcaatttataccaggacccagatggaacccgaaagctactgaacttcatgcttgac
aatcttgcagttcatccagagcagcttcctccgaggccatggattacattaaaagaacga
gaccaaattctgccatcagcatcattcacggtcatgtgttacaatgtgttatgtgataaa
tacgccacccggcagctatatggctattgcccgtcctgggcattaaactgggaatacagg
aaaaagggaattatggaagaaattgttaactgtgatgcagatatcattagtcttcaggaa
gtggaaacagagcaatacttcactctctttctgccagcattgaaggagcgtggatatgat
gggtttttttctccaaagtcacgtgccaaaatcatgtctgagcaggagagaaagcatgtg
gacggttgtgcaatattcttcaaaacagaaaaatttactttggtgcagaagcatacagtg
gaatttaaccaagtggcaatggctaattcagatggatccgaagctatgctgaacagagtg
atgacaaaagataatattggtgtcgctgtggtattagaggtccacaaagaactatttgga
acaggtatgaagcctattcatgctgcagacaaacagctgcttatagtggcaaatgcccac
atgcattgggacccagagtattctgatgtgaaacttatccagaccatgatgtttgtctca
gaggttaaaaacattctggagaaagcctctagtaggcctggcagcccaactgcagatcct
aattccatcccgctggtgctatgtgcagatcttaactcattgccagattcaggtgtcgtg
gaatatttaagcaatggaggagtagctgacaaccataaagacttcaaggaactaaggtac
aatgagtgtcttatgaacttcagctgcaatggaaagaatggaagctcagaagggagaatc
acacatggcttccaactgaagagcgcctatgaaaataacttgatgccttacaccaattac
acctttgatttcaaaggcgtgattgactacattttctattccaagactcatatgaacgtg
cttggtgtcctggggcctttagatcctcaatggctggttgagaacaacatcactgggtgt
ccacaccctcacatcccttcagaccacttctcactgttaacacaacttgaactccaccct
ccacttctgcctcttgtcaatggtgttcacttgcctaatcggaggtag
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