Leopardus geoffroyi (Geoffroy's cat): 123595941
Help
Entry
123595941 CDS
T10761
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03020
RNA polymerase
lgf03420
Nucleotide excision repair
lgf05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123595941 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
123595941 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
123595941 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgf03021
]
123595941 (POLR2B)
03400 DNA repair and recombination proteins [BR:
lgf03400
]
123595941 (POLR2B)
Enzymes [BR:
lgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123595941 (POLR2B)
Transcription machinery [BR:
lgf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123595941 (POLR2B)
DNA repair and recombination proteins [BR:
lgf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123595941 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123595941
NCBI-ProteinID:
XP_045329886
LinkDB
All DBs
Position
B1:complement(159636615..159680617)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaggatatgcaatatgatgaggatgatgatgaaatcaccccagac
ttgtggcaggaagcatgctggattgtaatcagttcctattttgatgagaaaggcttggtc
agacagcagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgccccacctatagacctacaagctgaagctcagcatgctagtggagaagttgaagaa
ccgccaagatatttgctgaagtttgaacaaatttacctctccaagcctacccattgggaa
agagatggtgctccttcaccaatgatgccaaacgaggccagattaagaaatctcacgtat
tctgctcccctttatgttgacataaccaaaactgtcattaaagaaggtgaagaacaactt
caaactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttac
tgcctgttgaatggcttaacagatcgtgatctttgtgagttaaatgaatgccccttggat
ccaggtggatatttcattattaatgggtcagaaaaggttctgattgctcaagaaaaaatg
gcaacaaacacagtctatgtgttcgccaaaaaggattctaaatatgcctacacaggagag
tgtagatcatgtctggagaattcttcccgacccaccagtactatttgggttagcatgctg
gcgagaggaggacagggtgcaaaaaagagtgctattggtcaacgcattgtggcaacgcta
ccgtacatcaagcaggaagttcccatcattattgtgttcagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gtgaaaccttctctcgatgaagcttttgtcatccaagaacagaatgttgcactgaatttc
attggctcaagaggggcaaagcctggtgtcaccaaagagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgtcggtgtcagtgatttttgtgagaccaaa
aaagcttatttcttggggtacatggttcatcggttgcttttagcagctttgggtagaaga
gaattagatgacagggatcactatggaaacaaaagattggatcttgctggaccactactt
gcattcttattcagaggtatgtttaagaatttgcttaaagaggtgcggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggagttggcaattaaaacaaggattata
tctgatggcctaaaatattcgttagctactggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtgttaaaccgcctgacgtttgcatctactctttct
cacctgcgtcgtttaaattctcctattggtagagatggcaagctagcaaaaccaagacaa
ttgcataatacattgtggggaatggtgtgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagttggatctcagccttctcca
attcttgaatttttagaagaatggagtatggaaaacttagaagaaatatctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatacataaagatcct
gaacaacttatgaacaccctgaggaagttgcggcgacagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagcgggagattcggatctatactgatgcaggacgt
atttgtaggccacttctgattgtagaaaaacaaaaactacttctaaagaagagacatatt
gatcaattgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtagaatatattgatactctggaagaagaaacagtgatgcttgcaatgactccagat
gatttacaggagaaagaagtagcttattgttccacatatacacactgcgagattcatcca
tcaatgattcttggtgtctgtgcatctattattccctttcctgatcataaccagtcccct
agaaacacataccagtctgctatgggtaagcaggctatgggagtttatatcaccaacttc
catgttcgtatggatacactggcccatgttctgtattatcctcaaaaaccacttgtgact
acacggtctatggaatatctacgatttagagagctgccagcaggtatcaactccattgtg
gcgattgcatcttacactggatataatcaagaagactctgttataatgaatcgttcagct
gtagacagaggctttttcaggtctgttttctatcgatcatataaagaacaggaatctaaa
aaaggatttgatcaagaagaagtttttgagaagccaacccgtgaaacatgccaaggtatg
aggcatgccatttatgacaagctggatgatgatggtttgatagctcctggagtccgtgtg
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaattg
gagggcactaatcgacgctataccaagagagattgtagcacatttcttagaactagtgag
acgggaattgtggatcaggttatggtaactctcaatcaggaaggatataagttttgtaaa
ataagggtccgctctgttagaattccacagattggagacaaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtatagacaagaggatatgcctttcacctgtgaaggt
atcacccctgatatcatcataaatccccatgccatcccctctcgtatgactattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaacaaaggtgaaattggtgatgccact
ccatttaatgatgctgttaatgtgcagaagatttctaatctattatctgattatggctac
catctcagaggaaatgaggtcctgtacaatgggttcactggtcgaaaaatcacatcacaa
atttttattggtcctacatattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgccaggggacctattcagatccttaatagacaacccatggagggtagatctcgt
gatggtggcctgcgttttggagaaatggaacgagattgtcagatcgcccatggagcagcc
cagtttttaagggaaagattgtttgaggcatcagatccctatcaggttcatgtttgcaat
ctttgtggaataatggcaattgctaacacgaggacccatacatatgaatgtcggggctgt
cgcaataaaactcagatttctttggtgcgaatgccttatgcgtgcaaactgctgtttcag
gaacttatgtctatgagtattgcgcctcgaatgatgagcgtctag
DBGET
integrated database retrieval system
