Leopardus geoffroyi (Geoffroy's cat): 123596075
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Entry
123596075 CDS
T10761
Symbol
TBC1D1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04152
AMPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
123596075 (TBC1D1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgf04131
]
123596075 (TBC1D1)
Membrane trafficking [BR:
lgf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123596075 (TBC1D1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
123596075 (TBC1D1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
123596075 (TBC1D1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
ER
Motif
Other DBs
NCBI-GeneID:
123596075
NCBI-ProteinID:
XP_045330233
LinkDB
All DBs
Position
B1:complement(173775350..174000061)
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AA seq
1281 aa
AA seq
DB search
MEPITFTARRHLFPNEASVDFGLQLVGSLPVHALTTMPMLPWVVAEVRRLSGQSSKKEPG
TKQVRLCVSPSGLRCEPEPGRSQQWDPLICSSIFECKPQHVHKLIHNSHDPSYFACLIKD
NAGSQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELHCPSEFDETFAKKFEVLFCGR
VTVAHKKAPPALIDECIEKFNHVSCSRKAEFDLVSQDSETPNPVGGLSFTDKFRSVLQPV
GNGEQGGRPMRKSFSQPGLRSLAFKKEFQDGSLRSSSLFRSFEENDIENHLISGHNIVQP
TDIEENRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICREASGG
GGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKTPAQLCEGCPLQGLHKLCERI
EGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKV
HTHAGEIKQTSQIAAENIGSELPPSAARLRLDMLKNKAKRSLTESLESILSRGNKARGLQ
EHSASLDLDSSLSSTLSNASKEPSGCDREAVPASDSSFRLLGSSDDLSSDSESRPAEEPA
PLTPQQGFRRRANTLSHFPVQCEEPPEPAQGSPGVAQRKLMRYHSVSTETPHERNVNHPP
VGESKSCSGQSSAPAPPPRLNPSASSPNFFKYLKHSSSGEQSGNAVPKSISYRNALRKKL
RSSSSVPNFLKFLAPVDENNTSDFMSTKRDFDSKANHLGDVRGTPVKTRRHSWRQQIFLR
VATPQKACDSPSRYEDYSELGELPPRSPLEPVCEDGPAGPVPEERKRTSRELRELWQKAI
LQQILLLRMEKENQKLQASESDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKF
DMEKMHSAVGQGVPRHHRGEIWKFLAEQHHLKHQFPSKQQPKDTPYKELLKRLTSQQHAI
LIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEE
AFHMLKFLMFEMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAP
WFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKN
TLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNS
SLRKQNLDLLEQLQVANSRIQSLEATVEKLLSSESKLKQATLALELERAALLQVVGELRR
QTAAEPSGPEPDLARPGPTGD
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaataacattcacggcgaggagacatctgtttcctaacgaggcctcagtggac
ttcggcctgcagctggtcggctccttgcctgtgcacgctctgaccaccatgccgatgctg
ccgtgggtcgtggccgaggtgcgaaggctcagcgggcagtcctccaaaaaggagcctggt
accaagcaggtccggctttgtgtttcaccctccggattgagatgtgaacccgagccgggc
agaagtcaacagtgggatccactgatctgttccagcatcttcgagtgtaagccccagcat
gttcacaaactgatccacaacagccacgatccaagttactttgcttgtctgattaaggac
aatgcaggcagccagcagagtatctgctacgtgttcaaggccgacgatcaaacaaaagtg
cctgagatcatcagctccatccgacaggctgggaagattgcccgccaggaggagctgcat
tgcccgtctgagttcgatgagacgtttgccaagaagtttgaggtgctcttctgtggccgg
gtgacagtggctcacaagaaggcccctccggccctgatcgacgagtgcatcgagaagttc
aatcacgtcagctgcagcaggaaagccgaatttgacttggtctcccaggattctgaaacc
ccaaatcctgtgggagggctttccttcacggataagttccgatctgtgctccagccggtg
gggaatggggagcagggcgggaggcccatgcgcaaatccttctcccagcccggcttgcgc
tctttggcctttaagaaggaatttcaagatggaagccttcgaagtagtagtctcttcagg
tcctttgaggaaaatgacattgagaaccacctaattagcgggcacaatattgtgcagccg
acagatattgaggaaaatcgaactatgctcttcacgattggccagtctgaagtttacctc
atcagtcctgacaccaaaaaaatagcattggagaaaaactttaaggaaatatccttttgc
tctcagggtattagacacgtggaccatttcgggtttatctgccgagaggcttcagggggc
ggaggctttcatttcgtctgttacgtgtttcagtgcacaaatgaggctctggttgatgag
attatgatgaccctgaagcaggctttcactgtggctgcggtgcagcagacggctaaaaca
cctgcccagctgtgtgagggctgccccttgcagggcctgcacaagctgtgtgagcggata
gagggaatgaattcttccaaaaccaaactagaactccagaaacacctgacgacattgact
aatcaggagcaagcaactatttttgaggaggttcagaaattgcgaccaaggaatgagcag
cgagagaatgaattgattatttctttcctgaggtgtttatatgaagagaaacaaaaagtt
cacacccatgctggggagataaagcagacatcacagattgcagcggagaatattggaagt
gagttaccacctagtgccgctcgactgaggctggatatgctgaaaaacaaagcaaagaga
tctttaacagagtctttagaaagtattttgtcccggggtaataaagccagaggcctacag
gaacattctgccagtctggatctggacagctccttgtctagcacattaagtaacgccagc
aaagagccatctgggtgtgacagagaggccgtgcccgcctctgacagctccttcaggctc
ctcggctcctcggatgacctgtccagtgactcggagagccggcctgctgaagagcctgcc
ccactgacgccccagcagggcttcagaaggcgggcgaacaccctgagtcacttccctgtg
caatgcgaggagcctccagaaccggcacaggggtctccaggggtcgcccagaggaaactt
atgaggtatcactcagtgagcacagagacgcctcatgaacgaaatgtgaatcatccaccc
gttggcgagtctaaaagttgctcaggtcagtcttcagctcctgctcctccacctcgtctt
aacccctctgcctcctcgccaaatttttttaagtacctaaagcatagctcgagcggagaa
caaagtgggaatgctgtgccaaagagcatctcctaccgtaatgccctgcggaaaaaactt
cgttcttcttcctctgtgccaaactttctaaaatttctggctcctgtagatgaaaataac
acctctgattttatgagcacaaaaagggactttgactccaaagctaaccacctaggcgat
gtccgcgggacccccgtgaagacgcgaagacactcctggcggcagcagatattcctccga
gtggcgaccccacagaaagcgtgcgattctcccagcagatacgaagattactctgagctg
ggagagctaccgccacgatctcctttagaaccggtttgtgaagatgggcccgctggccct
gtcccagaggagaggaaaaggacatctcgagagcttcgagagttatggcaaaaggctatt
ctacagcagatcctgctgctcagaatggagaaggaaaatcagaagctgcaagcctctgaa
agcgatttgctgaacaagcgcctgaagcttgattatgaagaaatcactccttgtcttaaa
gaagtgaccacagtgtgggaaaagatgcttagcactccaggaagatcaaaaattaagttt
gacatggaaaaaatgcattcggctgttgggcaaggtgtgccacgtcatcaccggggggag
atctggaaattcctagcagagcagcaccacctcaaacaccagtttcccagtaagcagcag
ccaaaggacacgccatacaaagaactcttgaaacggctcacctcccaacagcacgcgatt
cttattgacctcgggcgaacctttccaacacatccgtacttctcggcgcagctgggggcg
ggccagctctcactttacaacattctgaaggcctactcacttctcgaccaggaagtgggg
tactgccagggtctcagctttgtagcgggcatcttgctgcttcacatgggtgaggaagag
gcatttcacatgctcaagttcctgatgtttgaaatgggactgcggaaacagtaccggccg
gacatgattattttacagatccagatgtaccagctctcgaggcttcttcacgattaccac
agagacctctacaatcacctcgaggagcatgagatcggcccgagcctctatgccgccccc
tggtttctcaccgtgtttgcctcacagttccctctgggatttgtagccagagtcttcgat
atgatctttcttcagggatcagaggtcatatttaaagtggcattaagtctgttgggaagc
cataagcccttgattctgcaacatgaaaacctagaaaccatagttgactttataaaaaac
acccttcccaacctgggcttggtgcaaatggaaaagaccatcagtcaggtgtttgagatg
gatatctctaagcagttacaagcctatgaagtcgagtaccatgtgcttcaagaagaactt
atcgattcctctcctctcagtgacaaccaaagaatggacaaattagagaagaccaacagc
agcttgcgcaaacagaaccttgacctactggagcaactgcaggtggcaaacagtaggatc
cagagcctggaggccaccgttgagaagcttctgagcagcgaaagcaagctgaagcaggcc
accctcgccctggagctggagcgggccgccctgctgcaggtggtgggggagcttcggagg
cagacggcggcagagccgagtggcccggagcccgacctcgcacggcccgggcccaccggg
gactga
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