Leopardus geoffroyi (Geoffroy's cat): 123596086
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Entry
123596086 CDS
T10761
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123596086 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgf01009
]
123596086 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lgf04515
]
123596086 (PCDH7)
Protein phosphatases and associated proteins [BR:
lgf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123596086 (PCDH7)
Cell adhesion molecules [BR:
lgf04515
]
Cadherins
Protocadherins
123596086 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
Cadherin_pro
LYRIC
KIAA1549
MLANA
EphA2_TM
Fibulin_C
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
123596086
NCBI-ProteinID:
XP_045330258
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All DBs
Position
B1:complement(180034261..180461845)
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AA seq
1281 aa
AA seq
DB search
MLRMRTAGWARGWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGGGGGGGEGRRAGPADSAPYPGGGGNGASGGGPGGSKRRPDAPEGGGG
TNPGGRSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAIL
RVLITDVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESV
RRLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPS
IEIRKIGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPAS
DTEGDQNKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPV
FGQSVVEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVN
TILDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQP
NSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKA
VDGGDPPRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDG
INADLNYSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTL
VHVFVNESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILI
ILIVVMARYCRSKSKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTV
EASKPNGQRYDSVNEKLSDSPNMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTA
GKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQVDTVQTTNPPGHIEES
CKMNPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDSYE
RTTPDGSVGEAEHMENDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKL
STFMPVDERGSQEKLANGEAAIMGDRNRNLLNKKLTSSYETFSAASFSKNEEANPEDIPL
TKTGEYKPSPVNTLTRREVYL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccgcgggatgggcgcgcggctggtgcctgggctgctgcctcctc
ttgccgctctcgctcagcctggcggccgccaagcaactcctccggtatcgactggccgag
gagggcccggcggacgtccgcatcggcaacgtcgcctcggacctgggcatcgtgaccggc
tcgggtgaggtgactttcagcctcgagtcgggctcggagtacctgaagatcgacaacctc
accggcgagctgagcaccagcgagcggcgcatcgaccgcgagaagctgccccagtgtcag
atgatcttcgacgagaacgagtgctttctggacttcgaggtgtcggtgatcgggccctcg
cagagctgggtggacctgttcgagggccgggtcatcgtgctcgacatcaacgacaacacg
cccaccttcccgtcacccgtgctcacgctcacggtggaggagaaccggccggtgggcact
ctctacctgctgcccaccgccacggaccgtgacttcggccgcaacggcatcgagcgctac
gagctgctccaggagcccgggggcggcggcggcggcggcggcggcggcggcggcggcgag
ggccggcgcgccgggcctgccgacagcgccccctaccccgggggcggcgggaacggcgcg
agcggcggcggcccaggcggctccaagaggcggccggacgcgccggagggcggcggcggg
accaaccccggcggccgcagcagcgtgttcgaactgcaggtggccgacaccccggatggc
gagaagcagccacagctgatcgtgaagggggcgctggaccgggaacaacgcgactcctac
gagctgaccctgcgggtgcgcgacggtggcgacccgccgcgctcctctcaggccatcttg
cgggtgctcatcaccgacgtgaacgacaacagcccccgcttcgagaagagcgtgtacgag
gcggacctcgccgagaacagcgccccggggactcccatcctgcagttgcgcgccgccgac
ctggacgtgggggtcaacgggcagatcgagtacgtgttcggagccgctaccgaatccgtg
cggcggctgctgcgcctcgacgagacgtccggctggctcagtgtcctgcaccgtatcgac
cgggaggaggtcaaccagctgcgcttcacggtcatggcccgggaccgcgggcagcccccc
aagaccgacaaggccacggtggtcctcaacatcaaggacgagaacgacaatgtgccgtcc
attgaaatccgcaagatcgggcgtatcccgctcaaggacggggtggccaacgtggcggag
gatgttcttgtcgacacccccattgctctggtgcaggtgtccgaccgagaccaaggcgag
aacggcgtggtcacctgcaccgtggtgggcgacgtgcccttccagctcaagccggccagc
gacacagagggcgaccagaacaagaaaaagtactttctgcacacctcggcccctttggac
tatgagaccacccgggagttcaacgtggtcatcgtggcggtggactcgggcagccccagc
ctctccagcaacaactccctggttgtcaaggtaggagacactaatgacaacccgcctgtc
ttcggccagtcagtagtggaggtttactttcccgagaacaacatccctggagagagggtg
gccacggtgctggcgacggacgccgacagcgggaaaaatgcagagatcgcctactcgctg
gattcctctgtgatggggatctttgccatcgatcctgattccggggacatcctcgtcaat
acgatactggaccgcgagcagactgacaggtatgagtttaaagttaacgccaaagacaaa
ggcatcccagtgttacagggcagcaccacggtgattgtgcaggtggctgacaagaatgac
aatgaccctaagtttatgcaggacgtctttaccttttatgtgaaagaaaacttgcagccc
aacagccctgtggggatggtcacggtgatggatgctgacaagggacgcaatgcagagatg
agcctctacatagaggaaaacagtaacattttctccattgaaaatgacacggggaccatt
tattccacaatgtcttttgaccgggaacatcagaccacatacacgttcagagtcaaggct
gtggatgggggagatcctcccagatcagccacagccacggtctctctctttgtcatggat
gagaatgacaatgctcccacagttacccttcccagaaacatttcctacactttactgcca
ccttcaagtaatgtcaggacagtagtagctacagtgttggcaacagacagtgacgatggc
atcaatgcagaccttaactacagcattgtgggagggaatcccttcaagctgtttgaaatt
gattccaccagcggtgtggtttccttagtggggaaactcacccaaaagcattatggcttg
cacaggttggtggtgcaagtgaatgacagtggacagccttcccagtccaccacgaccctg
gtgcatgtgtttgtcaatgaaagtgtttctaatgcaactgtgattgactcacagatagcc
agaagtttgcacaccccactcacgcaggatatagctggtgacccaagttatgaaattagc
aagcagaggctcagtattgtcattggggtggtggccgggattatgaccgtgattctaatc
atcttaattgtagtgatggcaaggtactgccggtccaaaagcaaaaatggctatgaagct
ggcaaaaaagatcacgaagacttttttacaccccagcagcatgacaaatctaaaaagcct
aaaaaagacaagaaaaacaaaaaatctaagcagcctctctacagcagcattgtcactgta
gaagcttctaaaccaaatggacagaggtatgatagtgtcaatgagaagctgtcagacagc
ccaaacatggggcgataccgatccgttaacggtgggcctggcagtcctgacctggccagg
cattacaaatctagttctccattgcctaccgtccagcttcatccccagtcaccaactgca
ggaaaaaaacaccaggccgtacaagatctaccaccagccaacacatttgtgggagcagga
gacaacatttcaattggatcagatcactgctctgaatacagctgtcaaaccaataacaag
tacagcaaacaggtggatacagtgcagaccacgaacccccctggccacattgaggaatcg
tgtaaaatgaatccatttcgtagagtgacgttttctgttgtgagtcagcctcaggaccca
catcaagggtcactgcagagttgctatgacagcgggctggaggagtcagagacaccaagc
agtaagagttcatcagggccaaggctgggtgcccttccactcccagaggacagctacgaa
aggaccacgccggatggcagtgttggtgaggcagagcatatggaaaatgattcaagacct
cttccagatgtagccctgactgggaagtgtacccgtgagtgtgacgaatatggccactca
gactcctgctggatgccagtccgtacttctccagagaggaagaagagccagcccaaactc
tccactttcatgcctgttgacgaacgaggaagccaggaaaagctggccaatggcgaggcc
gccatcatgggtgaccgcaacagaaacctcctgaacaaaaagttgacctcgtcctatgag
accttcagtgcagctagtttcagcaaaaatgaggaagccaaccccgaggatattcccctt
acaaaaacaggggaatacaagccatctcctgtcaatactctcactagaagagaagtttac
ctgtag
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integrated database retrieval system
