Leopardus geoffroyi (Geoffroy's cat): 123596485
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Entry
123596485 CDS
T10761
Symbol
POLN
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
123596485 (POLN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgf03400
]
123596485 (POLN)
Enzymes [BR:
lgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123596485 (POLN)
DNA repair and recombination proteins [BR:
lgf03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
123596485 (POLN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
123596485
NCBI-ProteinID:
XP_045330911
LinkDB
All DBs
Position
B1:204418726..204570211
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AA seq
1384 aa
AA seq
DB search
MDIMFILHLGFMKMETYEAFVGFDPCKIPLSSVAQKIMSAVYSGDLVESKHWRGVKRVTA
EVVNKSRIKCSVLLEDGKNQSLEKRPSGVRLTDQPSADXRRKSSSSPLPPSCLPPPWKQE
ASVLQKMEWKRKQFLKEDIGNEKRESMNIAXHNFSGRTSKRVASEEDAAEVKAYLNCGNP
RACENHFCDSRYLDDGAKSQVIEMLQEAEALVVTPMYEDGWTQLRVAQASWCHCRAVQLA
VVPWTSQLLTAPPGEVSTPSPRCNYIEMEPPPMGAKSMRHIISFPGQTSPLTALSPTYMP
ASVQCKVSQAPYYVSGSYTIGAFFPRSEVRKSVNWFSSPRKVLFHTLKCKCPVICFHAKD
FVRTVLQFFGNDGGWKHVVHFVGLDPRIAARLLDPEDATPSFEDLVAKYLESAISVTVSS
TYGNSSRNVVNQNVCVNLKILYRLTMGLCSQLKVYGLWQLFCTLELPLIPVLAVMESHSI
RVNGEEMERTSALLGSRLKESEQEAHFVAGEQFLKTSNNQLREENLLSPRDPLPRTGPRG
LPSTSEAVLNALQDLHLLPKIILEYRRVHKTKSAFVDGLPARMKKGSISCMWNQTGTVTG
RLSARHANIQGISKHPIRITKPQNFKGAEGGRLTVSPRSTLVSPEGHTFLAADFSQIELR
ILAHLSGDPELWKLFRESEKDDVFSTLTSPWXDIXAHNMLHADRKKKKKITGAVSVRAGK
ERLAACLGITVPEAAQFLESFLQKYKKIKDFAQTTVAQGHRTGYVASIVGRRRPLPRVHT
QDQRLRARAERQAVNFVAPGTRSPSAHSPCACASWVLAGRGLGLSRPHRQLPWGGTGEMT
LTKTLQEGPQAQQALLGPAAVSRGPLAGLSGHTSTSSIAATLSGEGTSLCSAADLRKMAV
THVXTAVAASPTLAASNASHFPHVEAEGPPGPELLSHSWEGPRLTQAGPSARGLAHGGCE
PGKPPRQPLPQALPLTVCLREKRHGRGPAQAAIQGLGWSDGGRVSETPQAQVTRGHLSRG
LGHVSEDVRVLLVTLSTCGSPGSIIEMQNPTTADFGSEVQGGKTKAGDRRQQELARSSCS
HKSRPSMAPCVSHRCMKLGLEGRCPLLTQATWQGQATSTKKCPHRLYHYVDIHREFGGER
GPSCPSSCSQSCPLSFLLPAPGPLDRTGGPGTALAPPWPDPHWLRSAAEKPFYSLEGAFA
PGTHALVRGTRAAPAGVAHVRLHRRLGNWPRRAGLGLAPKSGCGPQMPPKVSLSAGRSWG
HLAPLREAPGPRPSPRLAESPSSHPATASPCASTFPRCVHFSPSFCLWPQATVGGENWFP
PARRVAVPKVSTGHFVLASRPEQAVEGATLTPQVVPWSKGLFKAGRIPPRDGKCLSTALS
QTQG
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggatattatgtttatcttacatttaggatttatgaaaatggaaacttatgaggcattt
gtaggctttgatccctgtaagataccgctttccagtgttgctcagaagattatgtctgct
gtgtactcaggtgacttagtggagtctaagcattggagaggggtgaaaagagtgactgca
gaagtggtgaataaatcccgtattaagtgttcagtacttctcgaagatgggaagaatcaa
tcactggaaaaaaggccctccggtgtcagactcacggaccagccatctgctgacnccaga
cggaagagcagcagctcaccgctgcctcccagctgtctgcctccaccgtggaagcaggag
gcttcggttctgcagaaaatggaatggaaaagaaaacaattcctaaaggaagatataggt
aatgaaaaaagagaaagcatgaacatagcancacataatttttcggggagaacaagcaaa
cgcgtggcatcggaagaagacgctgctgaggtcaaagcctacctaaattgtgggaacccc
agagcatgcgaaaaccatttttgtgatagtaggtatttggatgatggagcaaaaagccaa
gtgattgaaatgctccaagaggctgaggccctggtggtgacaccgatgtatgaggatggt
tggacccagctgagagtggcccaggcatcgtggtgtcactgcagagccgtgcagttggca
gtggtcccctggacatcccagcttctgacggcgcccccgggggaagtctccacacccagt
ccacggtgtaactacatagaaatggagcctcctccgatgggggccaagagcatgaggcat
ataatcagttttccaggtcagacatctccactcactgccttaagtcctacttacatgcct
gcttcagtccaatgtaaggtctcccaagctccatactatgtaagtggtagctatacaata
ggagcgttttttccaaggtcagaggtcagaaaatcagtgaattggttttcatctcccagg
aaagtgctgtttcatactctgaaatgtaaatgtcctgtcatttgttttcatgccaaggat
tttgtgaggacagtgctgcagttttttggtaatgatggcggttggaagcatgttgtgcat
ttcgtggggctagaccccagaattgccgcacggctcctagatcctgaggatgccacacct
tcttttgaagatttagtagcaaaatacctcgaaagcgccatatctgtcaccgtgagcagc
acttacgggaattcctcaagaaatgtggtgaaccagaatgtatgtgtgaacctgaagata
ctctacagactcacaatgggcctttgttctcagttgaaggtttacggtttatggcaacta
ttttgtactttggagcttcctctgataccggttttggcagtgatggaaagccacagcatt
cgggtgaacggagaagaaatggagaggacttcagcacttcttgggtctcgtctcaaggaa
tcggagcaggaagctcattttgtggcaggagaacagtttcttaaaacgagtaataatcag
cttcgagaggaaaacctgctgagtcccagggaccctcttcccagaacagggccgcggggg
ctcccgtccacctcagaggccgtgttaaatgccctgcaagatcttcatctgttacccaag
ataattttggaatataggcgggttcacaagaccaagtcagcctttgtggatggattacca
gctcgcatgaaaaagggctccatttcctgtatgtggaatcagacaggaactgtgactgga
agactttcagcgaggcatgcaaatattcaaggtatctccaagcacccaattcggattact
aaaccgcagaattttaaaggtgcggaaggcggaaggctcaccgtctccccaaggagcacg
ttggtctcacccgagggccacaccttcctggcggcagacttttcacagattgaattgcgc
attcttgcacacttatctggggatccggaactttggaagctattccgggaatctgaaaaa
gatgatgtattttctaccctgacttcaccgtggtaagatatatgagctcacaatatgcta
cacgctgacagaaagaaaaaaaagaaaatcactggggccgtttctgtccgtgcagggaag
gagcggcttgctgcttgccttggaattactgtgccggaagctgcccagtttttggagagt
tttttgcagaagtacaagaaaatcaaggactttgcccaaacaaccgttgcccagggtcac
cggacaggctacgtggcatccatcgtgggccgaaggagaccgctgccgagggtccacaca
caagaccagcggctccgggcacgagcagagcgacaggcggtgaacttcgtggcaccaggc
acccggagcccctcagcccattcgccgtgtgcatgtgcttcttgggtccttgccggccgc
ggcctcgggttgtcccgtcctcaccggcagctcccgtggggaggcaccggcgaaatgact
ctgaccaagaccttgcaggaaggcccccaggcccagcaggccctcctgggtcctgcagcc
gtcagcagggggccgctggctggcctcagcggccacacttccacatccagcattgctgcc
acactctcgggggaagggacgtccctatgctcggccgcagacctccgtaagatggccgtg
acccacgtcngtactgcagtggccgcttcccctaccctggcggccagcaacgcctcccac
ttcccgcacgtggaggcagaggggccccctgggcctgagctcctgtcgcactcctgggag
ggccctcgcctgacccaggctgggccaagtgcccgaggtctggcccacggcggctgcgag
ccggggaagccgcctcggcagcccctgccccaggcactgcccctgaccgtctgcctcagg
gagaagcggcacgggagggggccagcgcaggctgccatccagggcctggggtggagcgac
ggagggcgggtgtctgagaccccacaggcgcaagtcacccgtgggcacctgtcccggggt
ctgggccacgtctctgaggacgtgcgcgtgctgttggtgacactgtccacttgcggcagc
ccaggctccatcatagaaatgcagaatcccacaactgccgactttggttcagaggttcag
ggcggcaagaccaaggcaggtgaccgcaggcagcaggagctggctaggtcttcctgctcc
cacaagtcacgtccttccatggcgccctgtgtgtcccatcgctgcatgaagctcgggctg
gagggcaggtgtcccttgctgacccaggccacatggcagggccaggccaccagcaccaag
aagtgcccccacaggctctaccattatgtggacatccacagggaatttggcggggagcgc
gggccctcctgccccagcagctgcagccagagttgccctctatccttcctcctcccagcc
ccagggcctctggacagaactggaggccctggcacggcacttgcccccccctggccagac
ccccactggctgaggtcggcagcagagaagccgttctacagcctggagggcgcttttgcc
ccagggacccatgctcttgtcaggggcaccagagctgcacctgcaggtgtggcccatgtc
cgcctgcatcgtaggcttgggaactggcctcggagggctggcctgggcctggcacccaaa
tctggctgcggcccacagatgcccccgaaggtgagcctgagtgccggccgctcgtgggga
cacctggcgccactgcgggaggccccgggccctcggcccagcccacgtctcgcggagtct
ccaagcagccacccagccaccgccagcccctgtgccagcaccttcccccggtgtgtgcat
ttttccccttcattttgtctgtggccccaggcaacagtgggaggagagaactggtttcca
ccagcccgtcgtgtggctgtccccaaggtcagcacggggcactttgtactggcgtcacgg
ccagagcaggctgtggagggggccacgctcaccccccaggttgtcccctggagtaaaggt
cttttcaaagccggccgaattcctcccagggatgggaaatgcctgtccacagccctcagc
cagacccagggctga
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integrated database retrieval system
