Leopardus geoffroyi (Geoffroy's cat): 123597099
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Entry
123597099 CDS
T10761
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lgf03037
]
123597099 (NPHP4)
Cilium and associated proteins [BR:
lgf03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
123597099 (NPHP4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
123597099
NCBI-ProteinID:
XP_045331383
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Position
C1:complement(3750353..3861285)
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AA seq
1425 aa
AA seq
DB search
MKDWLRIFDQNVLVPPHPQRARQPIKESTAFQCVLKWLDGPLIKQGVLEVLSEVGCCLRV
SLFDVTYRHFFGRTWKTAVRPVEQLSRQPSRIVFDESLYFHTSLNHPNIVAVVEVVTEGR
RPDGSLQALSCGFGILRIFGNKLESPTSASQDKRLKLYHGTPRALLHPLLHDPVEQNKHM
TLMESCSLQYMLRPHPLLEPVFHLLPENLLVSGLQHIPGLLPAPGEKGDALRKPRLQKSV
TWDLDDLFFTLYPSLEKFEEELLELLVSDRFREEGIPRDGGTLEILERRLCVGVHNGLGF
VQRPQVVVLVPEMDVALTRSASFSRKVGSSSKASSGNQALVLRSRLRLRELVRHPAFAIV
FQLEYVFNSPSGADGKATSVASLSSVACMHMVRWAVWNPLPEAGSGKVVLPLQGGIRPNP
SHRLVYKVPPACMSSKEAEQVASGTVQFQYSLSPKGHLDTLPGHGHGPEAEQQPSRKPPA
SPASPPALPARGHAAPQDSPVGPGLSLSQLVASPRSAARCRLATPSSPQPAGSEPSPAQA
QGLPLEGRICHLEAELSQASLVLGASVAEHLQELPFTPVHVPIVAGVQARSSGSKLSRAS
MVLLQASGFPEILDANKQPAETVNPADPVQFNPQKEESDGLQGNEIVLQFLAFSRVSQDS
RAAPWPKTVYFTFQFYRFPPVTTPRLQLVRLDEAGRTLPGSLLHLLVLADRDDSSDAGSP
GFQLKFLAEPGFLRPGEQSRFSHYLAAQALQVDVWDGDSLLLVGSAAVPMKHLLRQGRPA
VQVSHELEVVATEYEQDVVVSGDVTRLGSIQPIGVYAVVKGWLHLTLANIGHVCEQRVRD
SSTLPPSRSRVISNDRTGHFEGGSLLRRGAPRPVKNVVQAQKLADVDCELAAMLFVPTQH
RSKGPQGTGREGDAVRRRKLERMRSVRLQESRGELSCWGASMLAQQSVRAQHARDLQVIA
AYRERTKAESITSALSLAITTKHTVHVTLGTAEFFEFALRNPHNTQHTVTIEVDSPELSI
ISDSREWRFFKDAAKLHTPVEEDMFRLRGGLAPQLFLRPRETAHVPFRYQTFSVGQAPAE
PSSDKGTDPGSPQKRSAAPTKHAKVVFRGGGGKPIAVLCLTVETQPPAADQVFRFYHPEL
TFLKKAIRLPPWHTLPGAPVGRPGEEPQVHVRCSDPNVICETQNVGPGEPRDVFLKVASG
RSPESKDFFVLVYTDRWLATPVQIWRIHLHSLQRVDVSCVTGQRTRLSLVLRGTQAVRRV
RAFTSHPQELTTDPRGVFVLPPGGVQDLHVGVTPRRAGTRFIHLNLVDVDYHQLVASWLV
CLSCRPPLISKAFEITLAAGEGKGANKRITYTNPYPTPRTYRLLSDRPDLLQFREESFQV
GGGETYTIGLRFASRQSAGEEEILIYINDHEDKNEEAFCVKVTYQ
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactggctcaggatttttgaccaaaacgtgctggtccctccccacccacagaga
gcacgccagcctataaaggaatcgactgcgtttcagtgcgtcctgaagtggcttgatggg
ccgctaattaagcagggagtgctggaggtgctgtcggaggtgggctgctgtctgcgcgtg
tccctctttgatgtcacctaccgacactttttcgggaggacgtggaagaccgccgtgagg
cccgtggagcagctctccaggcagccgtccaggatcgtcttcgatgagtccttgtatttt
cacacgtccttaaaccaccctaacatcgtggctgtggtcgaagtggtcaccgagggcagg
aggccggatggctccctccaggctttgtcatgtgggttcggaattcttcggatcttcggc
aacaagctggagtctcctacctcagcctcccaggacaagcggttgaagctgtaccacggc
accccccgagccctcctgcacccgcttctccacgaccccgtagaacaaaacaagcatatg
accctcatggagagctgcagcctgcagtacatgctgaggccacacccgctgctggagcct
gtgttccatcttcttcccgagaaccttctggtgtctggtctgcagcacattcctggcctc
cttcccgctcccggagaaaagggggacgccctccgaaagcctcgccttcagaagtctgtc
acgtgggacttggatgatttgttcttcacgctctatccctccctggagaaatttgaggaa
gagcttctggaactcctcgtcagtgatcgcttccgggaggagggcattccgcgggacggc
ggcacgctggagatcctggagcggcgcctgtgcgtgggtgtgcacaacggtctgggcttc
gtgcagaggccgcaggtcgtggtgctggtgcccgagatggacgtggccttgacgcgctct
gccagtttcagcaggaaagttggctcttcttcaaaggccagctctggaaaccaggctcta
gttttgagaagccgcctccgactccgtgagctggtccgtcaccctgcgttcgccatcgtc
tttcagctggagtacgtgttcaacagcccttcaggggcagacggcaaggcaacgtcggtc
gcctctctgtccagcgtggcatgcatgcacatggtccgctgggctgtgtggaaccccttg
ccggaagccggctccggaaaggtggtcttacctctgcagggtgggatccggcccaacccg
tcgcaccgtctggtctataaagtgcccccagcctgcatgagctccaaagaggcggagcag
gtggcgtcggggacggtccagttccagtactcgctgagccccaagggacacctggacacg
ctgccagggcacggccacggcccggaggcggagcaacagccctccaggaagccacccgcg
tcccctgcaagcccaccagcgctgccagcccgggggcacgctgccccccaggactcgccc
gtgggaccagggctgtctctctcccagctggtggcttccccacggtccgccgcccggtgc
cgcttggccacgccgtcatccccgcaacctgccggctctgagccctccccggcccaggcg
caggggctccccttggagggcaggatctgtcacctggaagccgagctgagccaggcgtcc
ttggtcctgggagcatctgttgccgaacacttgcaggagctgcctttcacaccggtgcac
gtcccgattgtcgcgggcgtccaggccaggagctctggaagtaagctctcgcgggcctcg
atggtgctcctgcaggcttccggctttcctgagattctggatgccaataagcaaccagcc
gagactgtaaatcccgcagaccccgtgcaattcaaccctcagaaggaagaatccgatggt
ctacaaggcaacgaaatagtactgcagtttcttgcctttagcagagtgtcccaagacagc
cgggcagcgccgtggccaaagaccgtgtatttcaccttccagttctaccgtttcccgccc
gtgacaacgccgcggctgcagctggtcaggctggacgaggcgggcaggacgctccccggt
tctctgctgcatctcctggttcttgccgacagagatgattcctccgatgctggctctcct
ggctttcagctcaagttcctggcggagcctggattcctgaggcccggagagcagagtcgg
ttcagccactacctggccgcgcaggccctccaggtggacgtctgggatggagactccctg
ctcctcgttggatctgcagccgtcccgatgaagcatctccttcgccaggggcggccggcc
gtgcaggtctcgcatgagctcgaggtcgtggcgaccgaatatgaacaggacgtggtggtg
agtggggacgtgaccaggcttggcagcatccagcccatcggcgtctacgcggtggtgaag
ggctggctacacctgaccctggccaacataggtcacgtgtgtgagcagagagtaagggat
tccagcacgttgccaccctccaggtcacgggtcatctcgaatgacagaaccggccacttc
gagggaggcagcctgctcaggcgcggggcgccgagaccagtaaaaaacgtggtccaagca
cagaagctggctgatgtggactgtgagttggctgccatgctgtttgtgcccacacagcac
aggagcaaagggccccagggcaccggccgcgagggggacgccgtccgcaggcgcaagctg
gagcggatgaggtccgtgcgccttcaggagtcccgaggagagctcagctgctggggggcc
agcatgttggctcagcagagcgtccgcgcacagcacgcacgcgacctgcaggtcattgcc
gcctatcgggagcgcacgaaggcggagagcatcaccagcgcgctgagcctggccatcacc
acgaagcacaccgtgcacgtcacgctgggcaccgccgagttcttcgagttcgcccttcgg
aacccccacaacacgcagcacacggtgaccatcgaggtggacagccctgagctgagcatc
atctcggacagtcgggagtggaggttcttcaaagacgcggccaagctgcacacgccggtg
gaagaggacatgttccgtctgcggggcggcctcgccccacagctcttcctgcgcccccgg
gagaccgcccacgtccccttcagataccagaccttctccgtggggcaggcccctgctgag
ccgagctctgacaagggcacggaccccggatcgccccagaagcgcagtgcagcgccgacc
aagcacgccaaggtcgtgttccggggcggcggcggcaagcccatcgccgtgctctgcctg
accgtggagacccagccccccgcggcggaccaggtctttcgcttctaccacccggagctc
accttcctgaagaaggccatccgcctgcccccctggcacacgctcccaggtgctcctgtg
ggaagacctggcgaggaaccccaggtccatgtccgatgtagcgacccgaacgtcatttgt
gagacccagaatgtgggccctggggagccacgggacgtgttcttgaaggtggctagtggt
cggagcccagagagcaaagacttctttgtcctcgtttacacggatcgctggctggcgaca
cctgtccaaatatggcggatccacctccactccttacagcgcgtggacgtgtcctgtgtc
acaggccagcggacccgcctgtcccttgtccttcgggggacacaggcggttaggagagtg
cgagctttcacctcacacccccaggagctgacaactgaccccagaggtgtgttcgtgctg
ccccctggtggggtgcaggacctgcatgtgggcgtgacgccccggagggcggggacccgg
ttcatccacctcaacctggtcgatgtggactaccaccaactggtggcctcgtggctcgtg
tgcctctcgtgccgccctcctctcatttccaaggccttcgagatcacgctggccgcaggg
gaaggcaagggcgccaacaagcgcatcacctacaccaacccctaccccaccccgaggacc
taccgcctgctcagcgaccgcccggacctgctgcagttcagggaggagtccttccaggtt
gggggaggagagacctacaccatcggcctgcggtttgcatctcgccagagcgccggggag
gaagagattctgatttacatcaacgaccacgaagacaaaaacgaagaggccttctgcgtg
aaggtcacctaccagtga
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