Leopardus geoffroyi (Geoffroy's cat): 123597211
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Entry
123597211 CDS
T10761
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf00310
Lysine degradation
lgf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
123597211 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123597211 (PRDM2)
03036 Chromosome and associated proteins [BR:
lgf03036
]
123597211 (PRDM2)
Enzymes [BR:
lgf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
123597211 (PRDM2)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
123597211 (PRDM2)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
123597211 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2HE
zf-H2C2_2
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
123597211
NCBI-ProteinID:
XP_045331656
LinkDB
All DBs
Position
C1:9716311..9839512
Genome browser
AA seq
1715 aa
AA seq
DB search
MNQNATEPVAAAESLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQESKN
KANKAEDTPLKTSEPDSASANMRDSAEGKLRSWTCSGPKEDEKPSASTAEQTAVLQEAVS
QDVLPEPVVSPTACAPHAEPEEKPEAANCEVNDLEEEEEEEEDEDDELEEEGEEEADTPN
ESSVKEPEIRCDEKPEDLLEEPKNVSKDALEGSPGLTPVSRTPKTKEEANGDVFETFMFP
CQHCERKFTTKQGLERHMHIHVSTASHAFKCQYCGKAFGTQINRRRHERRHEAGLKRKPG
LTLQPSEDPADGRSSGDSVAPKDDPTPCGLGQDSLLLRSEKAPREDVASSVAEENGEVKE
LHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLLEEPHPPAERAPPAQSVYVP
STEPEEDGEADDVYIMDISSNISENLNFYIDGKIQTSSSTSNCDVIEMESGSADLYGINC
LLTPVTVEITQNVKATQAPVADDLPKEPSSGTNSESKKRRTASPPALPKIKAETESEPSV
PACSLLPLSISTSEAVSFHKEKSVYLSSKLKQLLQTQDKLTPPAGISATEIPKLGPVCVS
APASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKQSDGKAVWTDAVLGSKKPKLESHSN
SPAWSLSGREERETVSPPGFDEYKVSKEWAAGPTFSNVCNQQPLDLSSGVKQKAEGAGKT
PVHWESVLDLSVHKKPCSDSEGKESKENHLVQPACSVIKKKKPTTRMLQKVLLNEYNGVD
LPAENAADGTRSPSPCQSLDPQPDSGLGPDAGLSAPVVESPPDVSPSSPALQTSSLSARQ
LPPLLIPTHPSSPPACPPVLTVATPPPPLLPTVPLPASSSGASPRPCPSPLSNATVQSPL
PILSPTVSPSPSPIPSVEPLTSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSA
VSSVVSSGDNLEASLPMITFKQEELENEELKPREEPQSAVEQEVVQETFNKNFVCNVCES
PFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKAKTDLSEHRFLLHGVGNIFVCSVCKKEFA
FLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHVEHMQSLPEDPLETSKEEEE
LNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFT
THNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKN
GVVVFDNSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAK
QKADLKTASECSSHICPYCHREFTYIGSLNKHAAFSCPKKPLSPSKKKAAHSSKKGGHPS
PASNDKNNSGHRRRTADAEIKMQSVQAPLGKTRARSSGPAQVPLPSSAFRSKQNVKFTAS
VKSKKPSSSLRNSSPIRMAKITHGEGKKPKAVAKNHSAQLASKTSRSLHVRVQKSKAVLQ
SKSALASKKRTDRFNVKSRERSGGPVTRSLQLAAAAEPGDSRREDGGGKQELKDFSYSLR
LASRCPPPAAPYITRQCRNVKATAAAQFQGPLFKE
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacgccaccgagcctgtcgcagctgctgagagcctggctgaggtacctgaa
catgtgcttcgaggacttccggaggaagtgaggcttttcccatctgctgttgacaagact
cggattggtgtctgggccactaaaccaattttaaaaggcaaaaagtttgggccatttgtt
ggtgataagaaaaaaagatctcaggttaagaataatgtgtacatgtgggaggtgtattac
ccaaatttgggatggatgtgcattgatgccaccgatccagagaagggaaactggctgcgg
tatgtgaattgggcttgctcaggagaagagcagaatttgtttccgctggaaatcaacagg
gccatttactataaaactttaaagccaatcgcgccgggcgaggagctcctggtctggtac
aatggggaagacaaccccgagatagcagctgcgattgaggaagagcgagccagcgcccgg
agcaagcggagctccccgaaaagcaggaaagggaagaaaaaatcccaggaaagtaaaaac
aaagcaaacaaagctgaagacacacccctgaagacaagcgagccagattctgcttctgca
aatatgagagattctgcggaaggtaagcttcgaagttggacttgttcgggtcccaaagag
gacgagaagccttcggcctcaacagctgagcagaccgccgttcttcaggaagcggttagt
caggatgtgcttccagaaccggtggtctcccccactgcctgcgcaccccacgcggaaccc
gaggagaagccagaagcagcgaactgtgaggtgaacgatttggaggaagaggaggaggag
gaagaagatgaagatgatgagctggaagaagagggggaggaagaagctgacacgccaaat
gaaagttctgtgaaagagccagaaattcggtgtgacgagaagcctgaagatttgttagag
gaaccaaaaaatgtttcgaaagacgctctcgaaggctctccagggctgacgcctgttagc
agaactcccaaaactaaggaagaggccaatggtgatgtgtttgaaacgtttatgtttccg
tgtcagcattgcgaaaggaagtttacaaccaagcaggggcttgaacgccacatgcacatc
cacgtatccaccgccagtcacgccttcaagtgccagtactgcgggaaggcgttcggcacc
cagatcaacaggcggaggcacgagcggcgccacgaggcggggctgaagcgcaagcccggc
ctcacgctccagccgtcggaagacccggccgacggcagatcgtccggagacagcgtggct
ccaaaggacgacccgaccccttgcggtctcgggcaggactctctgctcttgcgttcagag
aaggctccgcgagaagacgtcgcttcttctgttgcagaagagaatggggaagtgaaagag
cttcatccgtgcaagtactgtaagaaggtcttcgggacacataccaacatgaggcggcat
cagcgcagagtccacgaacgccatctgattcccaagggcgtgcggcggaaagggggcctc
ctggaggagccgcacccccccgcggagcgggccccgcccgcccagagtgtctacgtgccc
agcacggagcccgaggaggacggggaggccgacgacgtgtacatcatggacatctccagc
aacatctctgaaaacttaaacttctacatcgatggcaaaattcagaccagcagcagcacg
agtaactgtgacgtgattgagatggagtccggttcggccgacttgtacggtatcaattgc
ctgcttactccggtcacggtggaaatcactcagaatgtaaaggccacacaggcccctgta
gccgacgatcttcctaaagagccttccagcggcacgaacagtgagtccaagaaacggaga
acggcgagtcctcccgcgctccctaaaatcaaagccgagacggagtccgagccctcggtg
cccgcgtgttccttactgcctctcagcatatcaacttcggaggcggtgtctttccacaaa
gagaagagtgtgtacctgtcgtcgaagctcaaacaactgcttcaaacccaggacaaacta
acgcctcctgcgggcatttcggcaacggaaataccgaagttaggtcccgtttgcgtgtct
gctcctgcgtcgatgctgcccgtgacctcgagtaggtttaagcggcggaccagctctccc
cccagttccccacaacacagtcctgccctccgagactttggaaagcaaagtgatggcaaa
gcggtgtggaccgatgccgttctgggttccaaaaaacccaaattagaaagtcatagcaac
tcaccagcgtggagtttgtctgggagagaggagagagaaacggtgagcccgccaggcttt
gatgaatacaaagtgtctaaggagtgggcagccggtcctactttcagcaatgtgtgcaac
caacagccgctggacttatccagcggtgtcaaacagaaggccgagggcgcaggcaagacc
ccggtccactgggaatctgtattagacctcagtgtgcataagaagccttgtagtgactct
gaaggcaaggagtcgaaagaaaaccatctggtgcagccagcctgcagtgtcatcaagaaa
aagaagccaaccacccgcatgctgcagaaggttcttctcaacgagtacaacggcgtcgat
ttacctgcagagaatgctgcagacgggacccggagcccgagtccttgtcaatccctggat
ccccagccagactctggcctcggccctgacgctggtttatcggcccctgtggtcgagtcc
ccacctgatgtctctccttcctcgcctgccctgcagacatcttccctttctgccaggcag
ctgcctcctctcttgatcccaacgcatccctcttcccccccggcctgtcctcctgtgttg
actgttgccacgccaccccctccactccttcctactgtccctcttccggcctcctcttct
ggggcgtctccccgtccgtgtccctctccgctctcgaatgctaccgtgcagtcgccactt
cccattctgtcccctacggtgtccccctcgccatctcccatcccttccgtggaacctctc
acgtctgctgcttcgcccggacccccgaccctttcctcatcttcttcctcgtcttcttcc
tcatcttcgttctcctcttcttcctcctcctcttccccctcgccgccgccgctctcggca
gtgtcatccgttgtttcctctggggataatctggaagcttctctccccatgataactttc
aagcaggaggaactagagaatgaagagctgaagcccagggaagagccccagtctgcagtt
gagcaggaggttgttcaggagacgttcaacaaaaactttgtctgcaatgtctgtgaatca
ccttttctttccattaaagatctaaccaaacatttatctatccatgctgaagaatggccc
ttcaaatgtgaattttgtgtgcagctctttaaggctaaaactgatctgtcagaacatcgc
tttttgcttcatggagttgggaatatctttgtgtgttcagtttgtaaaaaagagtttgct
tttttgtgcaatttgcagcagcaccagcgagatctccacccagataaggtgtgcacacac
catgagtttgagagcggcacgctcaggccccagaacttcacagaccccagcaaggcccac
gtagagcacatgcagagtttgccggaagaccctctagaaacctcgaaagaagaagaagaa
ttaaatgattcctctgaagagctctacacgaccataaaaataatggcttctggaataaag
acaaaagacccagatgttcgactgggtctcaatcaacattacccaagctttaaaccacct
ccatttcagtaccatcaccgaaaccccatggggatcggcgtgacggccacaaatttcact
acgcacaatatcccgcagactttcaccactgccattcgctgcacaaagtgtgggaagggt
gtagacaacatgccagagttacacaaacacatcctggcgtgtgcctctgctagtgacaag
aagaggtatacccctaagaaaaacccagtccccttgaaacagactgtgcagcccaagaac
ggcgtggtggttttcgataactcggggaaaaatgccttcagacggatgggacagcccaag
agactgaacttcagtgtcgagctcagcaagatgtcctcgaacaagctcaagctaaatgca
ttgaagaaaaaaaaccagcttgtccagaaagcaatcctgcaaaaaaacaaatctgcaaag
cagaaggccgacctaaaaaccgcctccgagtgctcctcgcacatctgcccgtactgtcac
agagagttcacgtacatcgggagcctgaataagcacgctgctttcagctgccccaaaaaa
ccgctttctccttccaaaaaaaaagctgcccactcatccaagaaaggtggacacccgtca
cctgcaagtaacgacaaaaacaatagcggccaccgcaggcggaccgcggacgctgagatc
aagatgcaaagtgtgcaggcacccctgggcaagactagggcgcgcagctcaggcccggca
caagtcccgctgccctcgtcggccttcaggtccaagcagaatgtcaagttcacggcttcg
gtgaagtccaaaaagccaagctcctccttaaggaactcaagccccataagaatggccaaa
ataacccacggcgaggggaaaaaacccaaagctgtggccaagaatcattctgctcagctt
gcgagcaagacgtcccggagcctgcacgtgagggtacagaaaagcaaagccgtcttacag
agcaaatccgctctggccagtaagaaaagaacagaccggttcaatgtaaaatctagagaa
cggagtggggggccagtcacccgaagcctccagctggcagctgctgccgagccgggcgac
agcaggagggaggatggtggtggcaagcaggagctgaaggacttcagctacagtctccgc
ctggcgtcccggtgtcctcctccagctgccccgtacatcaccaggcagtgtaggaatgtc
aaggcgacggctgcagcccagttccagggacccctcttcaaagagtag
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