Leopardus geoffroyi (Geoffroy's cat): 123597497
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Entry
123597497 CDS
T10761
Symbol
MATN1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
123597497 (MATN1)
Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
123597497 (MATN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
EGF
Copine
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
123597497
NCBI-ProteinID:
XP_045332369
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All DBs
Position
C1:complement(23190336..23199452)
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AA seq
496 aa
AA seq
DB search
MRAISGTSLVLCGLLLWLQAPCTLGLAPQSRGHLCRTRPADLVFVVDSSRSVRPVEFEKV
KVFLSQVIESLDVGPNATRVGVVNYASAVKQEFPLRAHGSKAALLRAVRGIRPLSTGTMT
GLAIQFAITKAFSDAEGGRARSPDISKVVIVVTDGRPQDSVRDVSARARASGIELFAIGV
GRVDKATLRQIASEPQDEHVDYVESYSVIEKLSKKFQEAFCVVSDLCVTGDHDCEQVCLS
SPGSYTCACREGFTLNSDGKTCNVCSGRGGSSATDLVFLIDGSKSVRPENFELVKKFINQ
IVDTLDVSDKLAQVGLVQYSSSVRQEFPLGRFHTKKDIKAAVRNMSYMEKGTMTGAALKY
LIDNSFTVSSGARPGAQKVGIVFTDGRSQDYINDAAKKAKDLGFKMFAVGVGNAVEDELR
EIASEPVAEHYFYTADFKTIDQIGKKLQKKICVEEDPCACESLVKFQTTVEGLLQALTRK
LEAVSKRLAVLENRVV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagggccatctcgggcaccagccttgtgctgtgtggcctcctgctgtggctccaggcc
ccgtgcacgctgggcctcgccccccagtccagagggcacctctgccggacccggcccgcc
gacctggtgtttgtggtggacagctcgcgcagcgtgaggcccgtggagttcgagaaggtg
aaggtgttcttgtcccaggtcatcgagtcgctggatgtggggcccaacgccacccgggtg
ggcgtggtcaactacgccagcgccgtgaagcaggagttccccctgcgggcccacggctcc
aaggccgcgctgctgcgggccgttcgcggcatccggccgctgtccacggggaccatgacc
ggtctggccatccagttcgccatcaccaaagccttcagcgacgccgaggggggccgtgcc
aggtcccccgacatcagcaaggtggtcatcgtggtgacggacgggaggccccaggacagc
gtgcgggacgtgtctgcacgggcccgggccagcggcattgagctgttcgccatcggcgtg
ggccgcgtggacaaggccacgctgcggcagatcgccagcgagccgcaggacgagcacgtc
gactacgtggagagctacagcgtcatcgaaaagctgtccaagaagttccaggaggccttc
tgcgtggtgtcagacctgtgtgtcacaggagaccacgactgtgagcaggtgtgcctcagc
tccccgggctcctacacctgcgcctgtcgggagggcttcaccttgaacagtgatggcaag
acctgcaacgtatgcagcggccgtggtggcagttcggccactgacttggtcttcctcatc
gatggatccaaaagcgtgcggccggagaactttgagctggtgaagaagttcatcaatcag
atcgtggacacgctggacgtgtcagacaaactggcccaagtggggctggtgcagtactcc
agctccgtccgccaggagttcccgctgggccgcttccacacgaagaaggacattaaggcg
gctgtgcggaacatgtcttacatggagaagggcaccatgaccggagctgccctcaagtac
ctcattgacaattccttcaccgtgtccagcggggcgaggcccggtgcccagaaggtgggc
atcgtcttcactgacggccggagccaggactacattaatgatgctgccaagaaggccaag
gaccttggctttaagatgtttgctgtgggtgtgggcaatgccgtggaggacgagctgagg
gaaatcgcctcagagcccgtggccgaacactacttctacacggctgacttcaagaccatc
gaccagatcggcaagaagttgcagaagaagatctgtgtggaggaagacccgtgtgcttgc
gagtcccttgtgaaattccagaccacggtggaggggttgctgcaggccctgaccaggaaa
ctggaagctgtgagtaagcggctggccgtcctggagaacagagtcgtctaa
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